RNA–Protein interactions for RNA: ENST00000479866.5

RAPGEF3-209, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 3,917 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-209ENST00000479866 NKX1-1Q15270 411 aaPredicted RBP13.74□□□□□ -0.21
RAPGEF3-209ENST00000479866 DCAF8Q5TAQ9 597 aa13.74□□□□□ -0.21
RAPGEF3-209ENST00000479866 CNKSR2Q8WXI2 1034 aa13.74□□□□□ -0.21
RAPGEF3-209ENST00000479866 ZNF592Q92610 1267 aa13.73□□□□□ -0.21
RAPGEF3-209ENST00000479866 ERBB4Q15303 1308 aa13.73□□□□□ -0.21
RAPGEF3-209ENST00000479866 SH3TC1Q8TE82 1336 aa13.73□□□□□ -0.21
RAPGEF3-209ENST00000479866 PRPF40BQ6NWY9 871 aaKnown RBP13.73□□□□□ -0.21
RAPGEF3-209ENST00000479866 IL15P40933 162 aaPredicted RBP13.73□□□□□ -0.21
RAPGEF3-209ENST00000479866 TAF5LO75529 589 aa13.72□□□□□ -0.21
RAPGEF3-209ENST00000479866 PTF1AQ7RTS3 328 aa13.72□□□□□ -0.21
RAPGEF3-209ENST00000479866 SRP68Q9UHB9 627 aaKnown RBP13.72□□□□□ -0.21
RAPGEF3-209ENST00000479866 EYA2O00167 538 aa13.72□□□□□ -0.21
RAPGEF3-209ENST00000479866 TMX4Q9H1E5 349 aaPredicted RBP13.72□□□□□ -0.21
RAPGEF3-209ENST00000479866 TFCP2L1Q9NZI6 479 aa13.72□□□□□ -0.21
RAPGEF3-209ENST00000479866 STRCP1A6NGW2 1772 aa13.72□□□□□ -0.21
RAPGEF3-209ENST00000479866 IL6STP40189 918 aaPredicted RBP13.72□□□□□ -0.21
RAPGEF3-209ENST00000479866 ATP2B3Q16720 1220 aa13.72□□□□□ -0.21
RAPGEF3-209ENST00000479866 TNNI3KQ59H18 835 aa13.72□□□□□ -0.21
RAPGEF3-209ENST00000479866 USPL1Q5W0Q7 1092 aa13.72□□□□□ -0.21
RAPGEF3-209ENST00000479866 ESYT1Q9BSJ8 1104 aa13.72□□□□□ -0.21
RAPGEF3-209ENST00000479866 GREM2Q9H772 168 aa13.72□□□□□ -0.21
RAPGEF3-209ENST00000479866 WWC3Q9ULE0 1092 aa13.72□□□□□ -0.21
RAPGEF3-209ENST00000479866 FPGT-TNNI3KV9GXZ4 949 aa13.72□□□□□ -0.21
RAPGEF3-209ENST00000479866 A0A1B0GUL7 405 aa13.71□□□□□ -0.21
RAPGEF3-209ENST00000479866 VPS72Q15906 364 aa13.71□□□□□ -0.21
RAPGEF3-209ENST00000479866 ZNF219Q9P2Y4 722 aaPredicted RBP13.71□□□□□ -0.21
RAPGEF3-209ENST00000479866 PPP1R1BQ9UD71 204 aaPredicted RBP13.71□□□□□ -0.21
RAPGEF3-209ENST00000479866 AKAP2Q9Y2D5 859 aa13.71□□□□□ -0.21
RAPGEF3-209ENST00000479866 RGS12O14924 1447 aa13.71□□□□□ -0.21
RAPGEF3-209ENST00000479866 GOLGA6L22H0YM25 854 aa13.71□□□□□ -0.21
RAPGEF3-209ENST00000479866 SASH1O94885 1247 aa13.71□□□□□ -0.21
RAPGEF3-209ENST00000479866 CHMLP26374 656 aa13.71□□□□□ -0.21
RAPGEF3-209ENST00000479866 PPP4R3BQ5MIZ7 849 aa13.71□□□□□ -0.21
RAPGEF3-209ENST00000479866 EVI5LQ96CN4 794 aa13.71□□□□□ -0.21
RAPGEF3-209ENST00000479866 RGPD2P0DJD1 1756 aa13.71□□□□□ -0.21
RAPGEF3-209ENST00000479866 CHAF1AQ13111 956 aaPredicted RBP13.71□□□□□ -0.21
RAPGEF3-209ENST00000479866 RABEP1Q15276 862 aa13.71□□□□□ -0.21
RAPGEF3-209ENST00000479866 TRAPPC3LQ5T215 181 aa13.71□□□□□ -0.21
RAPGEF3-209ENST00000479866 NLRP10Q86W26 655 aa13.71□□□□□ -0.21
RAPGEF3-209ENST00000479866 ITPK1Q13572 414 aa13.71□□□□□ -0.22
RAPGEF3-209ENST00000479866 FAM196AQ6ZSG2 479 aa13.71□□□□□ -0.22
RAPGEF3-209ENST00000479866 CCDC152Q4G0S7 254 aa13.7□□□□□ -0.22
RAPGEF3-209ENST00000479866 ATP10DQ9P241 1426 aa13.7□□□□□ -0.22
RAPGEF3-209ENST00000479866 PTPN12Q05209 780 aaKnown RBP13.7□□□□□ -0.22
RAPGEF3-209ENST00000479866 ZBTB38Q8NAP3 1195 aaPredicted RBP13.7□□□□□ -0.22
RAPGEF3-209ENST00000479866 TCEANC2Q96MN5 208 aa13.7□□□□□ -0.22
RAPGEF3-209ENST00000479866 JAKMIP1Q96N16 626 aaKnown RBP13.7□□□□□ -0.22
RAPGEF3-209ENST00000479866 DTNBO60941 627 aa13.7□□□□□ -0.22
RAPGEF3-209ENST00000479866 APBA3O96018 575 aa13.7□□□□□ -0.22
RAPGEF3-209ENST00000479866 SF3B2Q13435 895 aaKnown RBP13.7□□□□□ -0.22
RAPGEF3-209ENST00000479866 POLA2Q14181 598 aa13.7□□□□□ -0.22
RAPGEF3-209ENST00000479866 RNF20Q5VTR2 975 aa13.7□□□□□ -0.22
RAPGEF3-209ENST00000479866 SNAP23O00161 211 aa13.69□□□□□ -0.22
RAPGEF3-209ENST00000479866 PLCD4Q9BRC7 762 aa13.69□□□□□ -0.22
RAPGEF3-209ENST00000479866 JAG2Q9Y219 1238 aa13.69□□□□□ -0.22
RAPGEF3-209ENST00000479866 FOSBP53539 338 aa13.69□□□□□ -0.22
RAPGEF3-209ENST00000479866 KRT27Q7Z3Y8 459 aa13.69□□□□□ -0.22
RAPGEF3-209ENST00000479866 FAM227BQ96M60 508 aa13.69□□□□□ -0.22
RAPGEF3-209ENST00000479866 NLRP3Q96P20 1036 aa13.69□□□□□ -0.22
RAPGEF3-209ENST00000479866 SLC4A9Q96Q91 983 aa13.69□□□□□ -0.22
RAPGEF3-209ENST00000479866 HIP1O00291 1037 aa13.69□□□□□ -0.22
RAPGEF3-209ENST00000479866 PDE8AO60658 829 aa13.69□□□□□ -0.22
RAPGEF3-209ENST00000479866 LRRFIP1Q32MZ4 808 aaKnown RBP13.69□□□□□ -0.22
RAPGEF3-209ENST00000479866 ZNF771Q7L3S4 317 aaPredicted RBP13.69□□□□□ -0.22
RAPGEF3-209ENST00000479866 SEC31BQ9NQW1 1179 aa13.69□□□□□ -0.22
RAPGEF3-209ENST00000479866 ANKIB1Q9P2G1 1089 aa13.69□□□□□ -0.22
RAPGEF3-209ENST00000479866 STRCQ7RTU9 1775 aa13.69□□□□□ -0.22
RAPGEF3-209ENST00000479866 TPM2P07951 284 aa13.68□□□□□ -0.22
RAPGEF3-209ENST00000479866 NMIQ13287 307 aaPredicted RBP13.68□□□□□ -0.22
RAPGEF3-209ENST00000479866 TMED8Q6PL24 325 aaPredicted RBP13.68□□□□□ -0.22
RAPGEF3-209ENST00000479866 LRP2BPQ9P2M1 347 aa13.68□□□□□ -0.22
RAPGEF3-209ENST00000479866 MYCNP04198 464 aaPredicted RBP13.68□□□□□ -0.22
RAPGEF3-209ENST00000479866 PCCAP05165 728 aaPredicted RBP13.68□□□□□ -0.22
RAPGEF3-209ENST00000479866 STK3Q13188 491 aa13.68□□□□□ -0.22
RAPGEF3-209ENST00000479866 SUSD4Q5VX71 490 aa13.68□□□□□ -0.22
RAPGEF3-209ENST00000479866 H7C1W4 665 aa13.68□□□□□ -0.22
RAPGEF3-209ENST00000479866 K7ELQ4 463 aaPredicted RBP13.68□□□□□ -0.22
RAPGEF3-209ENST00000479866 KDM4AO75164 1064 aa13.68□□□□□ -0.22
RAPGEF3-209ENST00000479866 CASTP20810 708 aaKnown RBP13.68□□□□□ -0.22
RAPGEF3-209ENST00000479866 CCDC129Q6ZRS4 1044 aa13.68□□□□□ -0.22
RAPGEF3-209ENST00000479866 KAZALD1Q96I82 304 aa13.68□□□□□ -0.22
RAPGEF3-209ENST00000479866 RGPD5Q99666 1765 aa13.67□□□□□ -0.22
RAPGEF3-209ENST00000479866 CLGNO14967 610 aa13.67□□□□□ -0.22
RAPGEF3-209ENST00000479866 TPTE2Q6XPS3 522 aa13.67□□□□□ -0.22
RAPGEF3-209ENST00000479866 CDC5LQ99459 802 aaKnown RBP13.67□□□□□ -0.22
RAPGEF3-209ENST00000479866 DBNLQ9UJU6 430 aaKnown RBP13.67□□□□□ -0.22
RAPGEF3-209ENST00000479866 CTSWP56202 376 aa13.67□□□□□ -0.22
RAPGEF3-209ENST00000479866 ANKRD18AQ8IVF6 992 aa13.67□□□□□ -0.22
RAPGEF3-209ENST00000479866 PRDM4Q9UKN5 801 aa13.67□□□□□ -0.22
RAPGEF3-209ENST00000479866 SPATA31A6Q5VVP1 1343 aa13.67□□□□□ -0.22
RAPGEF3-209ENST00000479866 TTC41PQ6P2S7 1318 aa13.67□□□□□ -0.22
RAPGEF3-209ENST00000479866 ZBTB9Q96C00 473 aa13.67□□□□□ -0.22
RAPGEF3-209ENST00000479866 CHMP5Q9NZZ3 219 aa13.67□□□□□ -0.22
RAPGEF3-209ENST00000479866 RAI14Q9P0K7 980 aa13.67□□□□□ -0.22
RAPGEF3-209ENST00000479866 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.67□□□□□ -0.22
RAPGEF3-209ENST00000479866 CPA1P15085 419 aa13.66□□□□□ -0.22
RAPGEF3-209ENST00000479866 USP26Q9BXU7 913 aa13.66□□□□□ -0.22
RAPGEF3-209ENST00000479866 COPRSQ9NQ92 184 aa13.66□□□□□ -0.22
RAPGEF3-209ENST00000479866 BARGINQ6ZT62 677 aa13.66□□□□□ -0.22
RAPGEF3-209ENST00000479866 XAGE2Q96GT9 111 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms