RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 CHMLP26374 656 aa9.66□□□□□ -0.86
VMA21-203ENST00000477649 IL15P40933 162 aaPredicted RBP9.66□□□□□ -0.86
VMA21-203ENST00000477649 RFX5P48382 616 aaPredicted RBP9.66□□□□□ -0.86
VMA21-203ENST00000477649 MCM2P49736 904 aa9.66□□□□□ -0.86
VMA21-203ENST00000477649 PTPN12Q05209 780 aaKnown RBP9.66□□□□□ -0.86
VMA21-203ENST00000477649 MARCH10Q8NA82 808 aaPredicted RBP9.66□□□□□ -0.86
VMA21-203ENST00000477649 ZBTB38Q8NAP3 1195 aaPredicted RBP9.66□□□□□ -0.86
VMA21-203ENST00000477649 SYTL4Q96C24 671 aaPredicted RBP9.66□□□□□ -0.86
VMA21-203ENST00000477649 ESYT1Q9BSJ8 1104 aa9.66□□□□□ -0.86
VMA21-203ENST00000477649 TBC1D2Q9BYX2 928 aa9.66□□□□□ -0.86
VMA21-203ENST00000477649 ZBTB3Q9H5J0 574 aa9.66□□□□□ -0.86
VMA21-203ENST00000477649 BCL9LQ86UU0 1499 aa9.66□□□□□ -0.86
VMA21-203ENST00000477649 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.65□□□□□ -0.86
VMA21-203ENST00000477649 RFX7Q2KHR2 1363 aa9.65□□□□□ -0.86
VMA21-203ENST00000477649 ZNF831Q5JPB2 1677 aa9.65□□□□□ -0.86
VMA21-203ENST00000477649 RAD50Q92878 1312 aa9.65□□□□□ -0.86
VMA21-203ENST00000477649 LOC102724428A0A0B4J2F2 783 aa9.65□□□□□ -0.86
VMA21-203ENST00000477649 SASH1O94885 1247 aa9.65□□□□□ -0.86
VMA21-203ENST00000477649 SIK1P57059 783 aa9.65□□□□□ -0.86
VMA21-203ENST00000477649 FOXO4P98177 505 aa9.65□□□□□ -0.86
VMA21-203ENST00000477649 PARP10Q53GL7 1025 aa9.65□□□□□ -0.86
VMA21-203ENST00000477649 AACSQ86V21 672 aa9.65□□□□□ -0.86
VMA21-203ENST00000477649 NUTM1Q86Y26 1132 aa9.65□□□□□ -0.86
VMA21-203ENST00000477649 RILPL2Q969X0 211 aa9.65□□□□□ -0.86
VMA21-203ENST00000477649 CCDC87Q9NVE4 849 aa9.65□□□□□ -0.86
VMA21-203ENST00000477649 PIP4K2AP48426 406 aaPredicted RBP9.64□□□□□ -0.87
VMA21-203ENST00000477649 EIF5P55010 431 aaKnown RBP9.64□□□□□ -0.87
VMA21-203ENST00000477649 CCDC57Q2TAC2 916 aa9.64□□□□□ -0.87
VMA21-203ENST00000477649 EPHA10Q5JZY3 1008 aa9.64□□□□□ -0.87
VMA21-203ENST00000477649 LMBR1LQ6UX01 489 aa9.64□□□□□ -0.87
VMA21-203ENST00000477649 C8orf37Q96NL8 207 aa9.64□□□□□ -0.87
VMA21-203ENST00000477649 KRTAP3-3Q9BYR6 98 aa9.64□□□□□ -0.87
VMA21-203ENST00000477649 KRTAP3-2Q9BYR7 98 aa9.64□□□□□ -0.87
VMA21-203ENST00000477649 USP21Q9UK80 565 aa9.64□□□□□ -0.87
VMA21-203ENST00000477649 CIZ1Q9ULV3 898 aaPredicted RBP9.64□□□□□ -0.87
VMA21-203ENST00000477649 PA2G4Q9UQ80 394 aaKnown RBP9.64□□□□□ -0.87
VMA21-203ENST00000477649 AKAP2Q9Y2D5 859 aa9.64□□□□□ -0.87
VMA21-203ENST00000477649 ZNF652Q9Y2D9 606 aa9.64□□□□□ -0.87
VMA21-203ENST00000477649 PALLDQ8WX93 1383 aa9.63□□□□□ -0.87
VMA21-203ENST00000477649 DOT1LQ8TEK3 1739 aa9.63□□□□□ -0.87
VMA21-203ENST00000477649 EYA2O00167 538 aa9.63□□□□□ -0.87
VMA21-203ENST00000477649 SNPHO15079 494 aa9.63□□□□□ -0.87
VMA21-203ENST00000477649 CSF1RP07333 972 aa9.63□□□□□ -0.87
VMA21-203ENST00000477649 ATP5JP18859 108 aa9.63□□□□□ -0.87
VMA21-203ENST00000477649 ATP6V1AP38606 617 aa9.63□□□□□ -0.87
VMA21-203ENST00000477649 LRRFIP1Q32MZ4 808 aaKnown RBP9.63□□□□□ -0.87
VMA21-203ENST00000477649 TNNI3KQ59H18 835 aa9.63□□□□□ -0.87
VMA21-203ENST00000477649 RTL5Q5HYW3 569 aaPredicted RBP9.63□□□□□ -0.87
VMA21-203ENST00000477649 CLEC4GQ6UXB4 293 aa9.63□□□□□ -0.87
VMA21-203ENST00000477649 KIAA1211Q6ZU35 1233 aa9.63□□□□□ -0.87
VMA21-203ENST00000477649 NLRP10Q86W26 655 aa9.63□□□□□ -0.87
VMA21-203ENST00000477649 DZIP3Q86Y13 1208 aaKnown RBP9.63□□□□□ -0.87
VMA21-203ENST00000477649 PPIL4Q8WUA2 492 aaKnown RBP eCLIP9.63□□□□□ -0.87
VMA21-203ENST00000477649 EAF2Q96CJ1 260 aaPredicted RBP9.63□□□□□ -0.87
VMA21-203ENST00000477649 KIF2CQ99661 725 aa9.63□□□□□ -0.87
VMA21-203ENST00000477649 DIAPH3Q9NSV4 1193 aa9.63□□□□□ -0.87
VMA21-203ENST00000477649 ZBTB1Q9Y2K1 713 aa9.63□□□□□ -0.87
VMA21-203ENST00000477649 FPGT-TNNI3KV9GXZ4 949 aa9.63□□□□□ -0.87
VMA21-203ENST00000477649 AFDNP55196 1824 aaKnown RBP9.63□□□□□ -0.87
VMA21-203ENST00000477649 K7ELQ4 463 aaPredicted RBP9.62□□□□□ -0.87
VMA21-203ENST00000477649 SGSM2O43147 1006 aa9.62□□□□□ -0.87
VMA21-203ENST00000477649 ONECUT3O60422 494 aaPredicted RBP9.62□□□□□ -0.87
VMA21-203ENST00000477649 FAM98CQ17RN3 349 aaKnown RBP9.62□□□□□ -0.87
VMA21-203ENST00000477649 RC3H1Q5TC82 1133 aaKnown RBP9.62□□□□□ -0.87
VMA21-203ENST00000477649 SLC4A9Q96Q91 983 aa9.62□□□□□ -0.87
VMA21-203ENST00000477649 SNRKQ9NRH2 765 aa9.62□□□□□ -0.87
VMA21-203ENST00000477649 RREB1Q92766 1687 aa9.61□□□□□ -0.87
VMA21-203ENST00000477649 CNTNAP4Q9C0A0 1308 aa9.61□□□□□ -0.87
VMA21-203ENST00000477649 PDE8AO60658 829 aa9.61□□□□□ -0.87
VMA21-203ENST00000477649 CRKLP46109 303 aaKnown RBP9.61□□□□□ -0.87
VMA21-203ENST00000477649 IFIT5Q13325 482 aaKnown RBP9.61□□□□□ -0.87
VMA21-203ENST00000477649 MEX3CQ5U5Q3 659 aaKnown RBP9.61□□□□□ -0.87
VMA21-203ENST00000477649 INTS5Q6P9B9 1019 aaKnown RBP9.61□□□□□ -0.87
VMA21-203ENST00000477649 ZNF34Q8IZ26 560 aa9.61□□□□□ -0.87
VMA21-203ENST00000477649 BCL11AQ9H165 835 aa9.61□□□□□ -0.87
VMA21-203ENST00000477649 CHMP5Q9NZZ3 219 aa9.61□□□□□ -0.87
VMA21-203ENST00000477649 CEP126Q9P2H0 1117 aa9.61□□□□□ -0.87
VMA21-203ENST00000477649 TRPC5Q9UL62 973 aaPredicted RBP9.61□□□□□ -0.87
VMA21-203ENST00000477649 ZNF330Q9Y3S2 320 aaPredicted RBP9.61□□□□□ -0.87
VMA21-203ENST00000477649 TJP1Q07157 1748 aa9.61□□□□□ -0.87
VMA21-203ENST00000477649 ABCC12Q96J65 1359 aa9.61□□□□□ -0.87
VMA21-203ENST00000477649 TUBGCP6Q96RT7 1819 aa9.61□□□□□ -0.87
VMA21-203ENST00000477649 TAF7LQ5H9L4 462 aa9.6□□□□□ -0.87
VMA21-203ENST00000477649 TSHZ3Q63HK5 1081 aa9.6□□□□□ -0.87
VMA21-203ENST00000477649 GJD4Q96KN9 370 aaPredicted RBP9.6□□□□□ -0.87
VMA21-203ENST00000477649 SIL1Q9H173 461 aa9.6□□□□□ -0.87
VMA21-203ENST00000477649 ANTXR1Q9H6X2 564 aa9.6□□□□□ -0.87
VMA21-203ENST00000477649 CWC22Q9HCG8 908 aaKnown RBP9.6□□□□□ -0.87
VMA21-203ENST00000477649 ANO2Q9NQ90 1003 aa9.6□□□□□ -0.87
VMA21-203ENST00000477649 CHMP3Q9Y3E7 222 aa9.6□□□□□ -0.87
VMA21-203ENST00000477649 SH3TC1Q8TE82 1336 aa9.59□□□□□ -0.87
VMA21-203ENST00000477649 SRCAPQ6ZRS2 3230 aa9.59□□□□□ -0.87
VMA21-203ENST00000477649 THSD7AQ9UPZ6 1657 aa9.59□□□□□ -0.87
VMA21-203ENST00000477649 ANKRD18BA2A2Z9 1011 aa9.59□□□□□ -0.87
VMA21-203ENST00000477649 HSP90AA1P07900 732 aaKnown RBP9.59□□□□□ -0.87
VMA21-203ENST00000477649 HSPA4P34932 840 aa9.59□□□□□ -0.87
VMA21-203ENST00000477649 SLC4A3P48751 1232 aa9.59□□□□□ -0.87
VMA21-203ENST00000477649 CTSWP56202 376 aa9.59□□□□□ -0.87
VMA21-203ENST00000477649 TFCP2Q12800 502 aa9.59□□□□□ -0.87
VMA21-203ENST00000477649 ATG9AQ7Z3C6 839 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms