RNA–Protein interactions for RNA: ENST00000476178.1

SATB1-213, Transcript of SATB homeobox 1, humanhuman

TSL 3

Gene SATB1, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-213ENST00000476178 ANP32CO43423 234 aa10.91□□□□□ -0.66
SATB1-213ENST00000476178 GRAPQ13588 217 aa10.91□□□□□ -0.66
SATB1-213ENST00000476178 CCDC27Q2M243 656 aa10.91□□□□□ -0.66
SATB1-213ENST00000476178 RTL5Q5HYW3 569 aaPredicted RBP10.91□□□□□ -0.66
SATB1-213ENST00000476178 RIC3Q7Z5B4 369 aa10.91□□□□□ -0.66
SATB1-213ENST00000476178 GRAPLQ8TC17 118 aaPredicted RBP10.91□□□□□ -0.66
SATB1-213ENST00000476178 FAM89AQ96GI7 184 aa10.91□□□□□ -0.66
SATB1-213ENST00000476178 VEGFBP49765 207 aa10.9□□□□□ -0.66
SATB1-213ENST00000476178 GOLGA2Q08379 1002 aa10.9□□□□□ -0.66
SATB1-213ENST00000476178 DEFB115Q30KQ5 88 aa10.9□□□□□ -0.66
SATB1-213ENST00000476178 NCBP3Q53F19 620 aaKnown RBP10.9□□□□□ -0.66
SATB1-213ENST00000476178 USP50Q70EL3 339 aaPredicted RBP10.9□□□□□ -0.66
SATB1-213ENST00000476178 C8orf58Q8NAV2 365 aa10.9□□□□□ -0.66
SATB1-213ENST00000476178 AIDAQ96BJ3 306 aa10.9□□□□□ -0.66
SATB1-213ENST00000476178 BCL2L13Q9BXK5 485 aa10.9□□□□□ -0.66
SATB1-213ENST00000476178 MRS2Q9HD23 443 aa10.9□□□□□ -0.66
SATB1-213ENST00000476178 SNED1Q8TER0 1413 aa10.9□□□□□ -0.66
SATB1-213ENST00000476178 CNTNAP1P78357 1384 aa10.9□□□□□ -0.67
SATB1-213ENST00000476178 RAD17O75943 681 aa10.89□□□□□ -0.67
SATB1-213ENST00000476178 SCNN1DP51172 638 aa10.89□□□□□ -0.67
SATB1-213ENST00000476178 CXCL9Q07325 125 aa10.89□□□□□ -0.67
SATB1-213ENST00000476178 TNIP1Q15025 636 aa10.89□□□□□ -0.67
SATB1-213ENST00000476178 CIAPIN1Q6FI81 312 aa10.89□□□□□ -0.67
SATB1-213ENST00000476178 PAXIP1Q6ZW49 1069 aaPredicted RBP10.89□□□□□ -0.67
SATB1-213ENST00000476178 TMC4Q7Z404 712 aa10.89□□□□□ -0.67
SATB1-213ENST00000476178 WWC1Q8IX03 1113 aa10.89□□□□□ -0.67
SATB1-213ENST00000476178 ISCA1Q9BUE6 129 aa10.89□□□□□ -0.67
SATB1-213ENST00000476178 RTFDC1Q9BY42 306 aaPredicted RBP10.89□□□□□ -0.67
SATB1-213ENST00000476178 NSFL1CQ9UNZ2 370 aaKnown RBP10.89□□□□□ -0.67
SATB1-213ENST00000476178 C6orf229H3BNL8 230 aa10.88□□□□□ -0.67
SATB1-213ENST00000476178 IRS4O14654 1257 aaPredicted RBP10.88□□□□□ -0.67
SATB1-213ENST00000476178 GMPSP49915 693 aaPredicted RBP10.88□□□□□ -0.67
SATB1-213ENST00000476178 KIAA2012Q0VF49 1180 aa10.88□□□□□ -0.67
SATB1-213ENST00000476178 GRM1Q13255 1194 aa10.88□□□□□ -0.67
SATB1-213ENST00000476178 TSPYL6Q8N831 410 aa10.88□□□□□ -0.67
SATB1-213ENST00000476178 CHMP4AQ9BY43 222 aa10.88□□□□□ -0.67
SATB1-213ENST00000476178 PHAXQ9H814 394 aaKnown RBP10.88□□□□□ -0.67
SATB1-213ENST00000476178 ADARB2Q9NS39 739 aaKnown RBP10.88□□□□□ -0.67
SATB1-213ENST00000476178 GPRC5DQ9NZD1 345 aa10.88□□□□□ -0.67
SATB1-213ENST00000476178 COL4A5P29400 1685 aa10.88□□□□□ -0.67
SATB1-213ENST00000476178 RIMBP2O15034 1052 aa10.87□□□□□ -0.67
SATB1-213ENST00000476178 HSP90B1P14625 803 aaKnown RBP10.87□□□□□ -0.67
SATB1-213ENST00000476178 TRIM28Q13263 835 aaKnown RBP10.87□□□□□ -0.67
SATB1-213ENST00000476178 SF3B3Q15393 1217 aaKnown RBP10.87□□□□□ -0.67
SATB1-213ENST00000476178 WASHC4Q2M389 1173 aa10.87□□□□□ -0.67
SATB1-213ENST00000476178 CELF1Q92879 486 aaKnown RBP10.87□□□□□ -0.67
SATB1-213ENST00000476178 MYD88Q99836 296 aa10.87□□□□□ -0.67
SATB1-213ENST00000476178 RASSF10A6NK89 507 aa10.86□□□□□ -0.67
SATB1-213ENST00000476178 G3V3G9 751 aa10.86□□□□□ -0.67
SATB1-213ENST00000476178 H7C1D1 291 aa10.86□□□□□ -0.67
SATB1-213ENST00000476178 TRAF5O00463 557 aa10.86□□□□□ -0.67
SATB1-213ENST00000476178 FOXN1O15353 648 aa10.86□□□□□ -0.67
SATB1-213ENST00000476178 DDX58O95786 925 aaKnown RBP10.86□□□□□ -0.67
SATB1-213ENST00000476178 CTCFP49711 727 aaPredicted RBP10.86□□□□□ -0.67
SATB1-213ENST00000476178 RPS8P62241 208 aaKnown RBP10.86□□□□□ -0.67
SATB1-213ENST00000476178 FMR1Q06787 632 aaKnown RBP eCLIP10.86□□□□□ -0.67
SATB1-213ENST00000476178 DCAF8Q5TAQ9 597 aa10.86□□□□□ -0.67
SATB1-213ENST00000476178 CCDC30Q5VVM6 783 aa10.86□□□□□ -0.67
SATB1-213ENST00000476178 TSR2Q969E8 191 aaKnown RBP10.86□□□□□ -0.67
SATB1-213ENST00000476178 IL16Q14005 1332 aa10.85□□□□□ -0.67
SATB1-213ENST00000476178 WDR33Q9C0J8 1336 aaKnown RBP10.85□□□□□ -0.67
SATB1-213ENST00000476178 ANKRD36CQ5JPF3 1778 aa10.85□□□□□ -0.67
SATB1-213ENST00000476178 GPSM2P81274 684 aa10.85□□□□□ -0.67
SATB1-213ENST00000476178 ZBTB38Q8NAP3 1195 aaPredicted RBP10.85□□□□□ -0.67
SATB1-213ENST00000476178 JARID2Q92833 1246 aaPredicted RBP10.85□□□□□ -0.67
SATB1-213ENST00000476178 EYA3Q99504 573 aa10.85□□□□□ -0.67
SATB1-213ENST00000476178 DBNDD1Q9H9R9 158 aa10.85□□□□□ -0.67
SATB1-213ENST00000476178 ANKIB1Q9P2G1 1089 aa10.85□□□□□ -0.67
SATB1-213ENST00000476178 CNOT7Q9UIV1 285 aaKnown RBP10.85□□□□□ -0.67
SATB1-213ENST00000476178 ECE1P42892 770 aa10.84□□□□□ -0.67
SATB1-213ENST00000476178 MAP2K1Q02750 393 aaPredicted RBP10.84□□□□□ -0.67
SATB1-213ENST00000476178 DOK7Q18PE1 504 aa10.84□□□□□ -0.67
SATB1-213ENST00000476178 CCDC191Q8NCU4 936 aa10.84□□□□□ -0.67
SATB1-213ENST00000476178 CCDC85AQ96PX6 553 aaPredicted RBP10.84□□□□□ -0.67
SATB1-213ENST00000476178 BEGAINQ9BUH8 593 aa10.84□□□□□ -0.67
SATB1-213ENST00000476178 STK31Q9BXU1 1019 aa10.84□□□□□ -0.67
SATB1-213ENST00000476178 GLIS2Q9BZE0 524 aaPredicted RBP10.84□□□□□ -0.67
SATB1-213ENST00000476178 ZC3H12CQ9C0D7 883 aaKnown RBP10.84□□□□□ -0.67
SATB1-213ENST00000476178 ZNF408Q9H9D4 720 aa10.84□□□□□ -0.67
SATB1-213ENST00000476178 WBP1LQ9NX94 342 aa10.84□□□□□ -0.67
SATB1-213ENST00000476178 CWC25Q9NXE8 425 aaPredicted RBP10.84□□□□□ -0.67
SATB1-213ENST00000476178 POLLQ9UGP5 575 aa10.84□□□□□ -0.67
SATB1-213ENST00000476178 YDJCA8MPS7 323 aa10.83□□□□□ -0.68
SATB1-213ENST00000476178 CELF2O95319 508 aaKnown RBP10.83□□□□□ -0.68
SATB1-213ENST00000476178 PCCAP05165 728 aaPredicted RBP10.83□□□□□ -0.68
SATB1-213ENST00000476178 LBX1P52954 281 aa10.83□□□□□ -0.68
SATB1-213ENST00000476178 TWISTNBQ3B726 338 aaPredicted RBP10.83□□□□□ -0.68
SATB1-213ENST00000476178 CCDC152Q4G0S7 254 aa10.83□□□□□ -0.68
SATB1-213ENST00000476178 RBM26Q5T8P6 1007 aaKnown RBP10.83□□□□□ -0.68
SATB1-213ENST00000476178 CST9Q5W186 159 aa10.83□□□□□ -0.68
SATB1-213ENST00000476178 WDR63Q8IWG1 891 aa10.83□□□□□ -0.68
SATB1-213ENST00000476178 MICALL2Q8IY33 904 aa10.83□□□□□ -0.68
SATB1-213ENST00000476178 CAPNS2Q96L46 248 aa10.83□□□□□ -0.68
SATB1-213ENST00000476178 METTL22Q9BUU2 404 aaPredicted RBP10.83□□□□□ -0.68
SATB1-213ENST00000476178 SEC31BQ9NQW1 1179 aa10.83□□□□□ -0.68
SATB1-213ENST00000476178 MAP3K2Q9Y2U5 619 aa10.83□□□□□ -0.68
SATB1-213ENST00000476178 ZBTB12Q9Y330 459 aaPredicted RBP10.83□□□□□ -0.68
SATB1-213ENST00000476178 SALL2Q9Y467 1007 aaPredicted RBP10.83□□□□□ -0.68
SATB1-213ENST00000476178 CDHR2Q9BYE9 1310 aa10.83□□□□□ -0.68
SATB1-213ENST00000476178 ADAMTSL1Q8N6G6 1762 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms