RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 SF3B3Q15393 1217 aaKnown RBP9.13□□□□□ -0.95
HDAC3-207ENST00000475549 RTL5Q5HYW3 569 aaPredicted RBP9.13□□□□□ -0.95
HDAC3-207ENST00000475549 DPP8Q6V1X1 898 aaPredicted RBP9.13□□□□□ -0.95
HDAC3-207ENST00000475549 DDX46Q7L014 1031 aaKnown RBP9.13□□□□□ -0.95
HDAC3-207ENST00000475549 PNMA8AQ86V59 439 aaPredicted RBP9.13□□□□□ -0.95
HDAC3-207ENST00000475549 MPNDQ8N594 471 aa9.13□□□□□ -0.95
HDAC3-207ENST00000475549 GRAPLQ8TC17 118 aaPredicted RBP9.13□□□□□ -0.95
HDAC3-207ENST00000475549 VPS33BQ9H267 617 aa9.13□□□□□ -0.95
HDAC3-207ENST00000475549 ZNRF3Q9ULT6 936 aa9.13□□□□□ -0.95
HDAC3-207ENST00000475549 ARFGEF2Q9Y6D5 1785 aa9.13□□□□□ -0.95
HDAC3-207ENST00000475549 TMEM88BA6NKF7 163 aa9.12□□□□□ -0.95
HDAC3-207ENST00000475549 YDJCA8MPS7 323 aa9.12□□□□□ -0.95
HDAC3-207ENST00000475549 HSPA1AP0DMV8 641 aaKnown RBP9.12□□□□□ -0.95
HDAC3-207ENST00000475549 HSPA1BP0DMV9 641 aaKnown RBP9.12□□□□□ -0.95
HDAC3-207ENST00000475549 VEGFBP49765 207 aa9.12□□□□□ -0.95
HDAC3-207ENST00000475549 GNAI1P63096 354 aa9.12□□□□□ -0.95
HDAC3-207ENST00000475549 KIAA2012Q0VF49 1180 aa9.12□□□□□ -0.95
HDAC3-207ENST00000475549 NIM1KQ8IY84 436 aa9.12□□□□□ -0.95
HDAC3-207ENST00000475549 JARID2Q92833 1246 aaPredicted RBP9.12□□□□□ -0.95
HDAC3-207ENST00000475549 CACNA1SQ13698 1873 aa9.12□□□□□ -0.95
HDAC3-207ENST00000475549 CCDC88AQ3V6T2 1871 aa9.12□□□□□ -0.95
HDAC3-207ENST00000475549 CNTNAP1P78357 1384 aa9.12□□□□□ -0.95
HDAC3-207ENST00000475549 DICER1Q9UPY3 1922 aaKnown RBP9.11□□□□□ -0.95
HDAC3-207ENST00000475549 COL4A1P02462 1669 aa9.11□□□□□ -0.95
HDAC3-207ENST00000475549 SHTN1A0MZ66 631 aa9.11□□□□□ -0.95
HDAC3-207ENST00000475549 TRAF5O00463 557 aa9.11□□□□□ -0.95
HDAC3-207ENST00000475549 IRS4O14654 1257 aaPredicted RBP9.11□□□□□ -0.95
HDAC3-207ENST00000475549 RAD17O75943 681 aa9.11□□□□□ -0.95
HDAC3-207ENST00000475549 HIRAP54198 1017 aaPredicted RBP9.11□□□□□ -0.95
HDAC3-207ENST00000475549 CST9Q5W186 159 aa9.11□□□□□ -0.95
HDAC3-207ENST00000475549 ZBTB38Q8NAP3 1195 aaPredicted RBP9.11□□□□□ -0.95
HDAC3-207ENST00000475549 TSR2Q969E8 191 aaKnown RBP9.11□□□□□ -0.95
HDAC3-207ENST00000475549 SEC31BQ9NQW1 1179 aa9.11□□□□□ -0.95
HDAC3-207ENST00000475549 KCNQ5Q9NR82 932 aa9.11□□□□□ -0.95
HDAC3-207ENST00000475549 GPRC5DQ9NZD1 345 aa9.11□□□□□ -0.95
HDAC3-207ENST00000475549 POLLQ9UGP5 575 aa9.11□□□□□ -0.95
HDAC3-207ENST00000475549 LTBP1Q14766 1721 aa9.11□□□□□ -0.95
HDAC3-207ENST00000475549 ADAMTSL1Q8N6G6 1762 aa9.1□□□□□ -0.95
HDAC3-207ENST00000475549 RASSF10A6NK89 507 aa9.1□□□□□ -0.95
HDAC3-207ENST00000475549 GMPSP49915 693 aaPredicted RBP9.1□□□□□ -0.95
HDAC3-207ENST00000475549 GPSM2P81274 684 aa9.1□□□□□ -0.95
HDAC3-207ENST00000475549 USP50Q70EL3 339 aaPredicted RBP9.1□□□□□ -0.95
HDAC3-207ENST00000475549 RIC3Q7Z5B4 369 aa9.1□□□□□ -0.95
HDAC3-207ENST00000475549 WWC1Q8IX03 1113 aa9.1□□□□□ -0.95
HDAC3-207ENST00000475549 SUPT20HQ8NEM7 779 aa9.1□□□□□ -0.95
HDAC3-207ENST00000475549 MYD88Q99836 296 aa9.1□□□□□ -0.95
HDAC3-207ENST00000475549 TMX4Q9H1E5 349 aaPredicted RBP9.1□□□□□ -0.95
HDAC3-207ENST00000475549 NSFL1CQ9UNZ2 370 aaKnown RBP9.1□□□□□ -0.95
HDAC3-207ENST00000475549 WTIPA6NIX2 430 aaPredicted RBP9.09□□□□□ -0.95
HDAC3-207ENST00000475549 IGKV5-2P06315 115 aa9.09□□□□□ -0.95
HDAC3-207ENST00000475549 LMOD1P29536 600 aaPredicted RBP9.09□□□□□ -0.95
HDAC3-207ENST00000475549 RPS8P62241 208 aaKnown RBP9.09□□□□□ -0.95
HDAC3-207ENST00000475549 CALD1Q05682 793 aaKnown RBP9.09□□□□□ -0.95
HDAC3-207ENST00000475549 CCDC27Q2M243 656 aa9.09□□□□□ -0.95
HDAC3-207ENST00000475549 CIAPIN1Q6FI81 312 aa9.09□□□□□ -0.95
HDAC3-207ENST00000475549 DLK2Q6UY11 383 aa9.09□□□□□ -0.95
HDAC3-207ENST00000475549 G2E3Q7L622 706 aa9.09□□□□□ -0.95
HDAC3-207ENST00000475549 TMC4Q7Z404 712 aa9.09□□□□□ -0.95
HDAC3-207ENST00000475549 GPR101Q96P66 508 aaPredicted RBP9.09□□□□□ -0.95
HDAC3-207ENST00000475549 METTL22Q9BUU2 404 aaPredicted RBP9.09□□□□□ -0.95
HDAC3-207ENST00000475549 ADARB2Q9NS39 739 aaKnown RBP9.09□□□□□ -0.95
HDAC3-207ENST00000475549 PGAP2Q9UHJ9 254 aa9.09□□□□□ -0.95
HDAC3-207ENST00000475549 ZBTB12Q9Y330 459 aaPredicted RBP9.09□□□□□ -0.95
HDAC3-207ENST00000475549 DUOX1Q9NRD9 1551 aa9.08□□□□□ -0.96
HDAC3-207ENST00000475549 RIMBP2O15034 1052 aa9.08□□□□□ -0.96
HDAC3-207ENST00000475549 FOXN1O15353 648 aa9.08□□□□□ -0.96
HDAC3-207ENST00000475549 EGFRP00533 1210 aa9.08□□□□□ -0.96
HDAC3-207ENST00000475549 PCCAP05165 728 aaPredicted RBP9.08□□□□□ -0.96
HDAC3-207ENST00000475549 GOLGA2Q08379 1002 aa9.08□□□□□ -0.96
HDAC3-207ENST00000475549 WASHC4Q2M389 1173 aa9.08□□□□□ -0.96
HDAC3-207ENST00000475549 DEFB115Q30KQ5 88 aa9.08□□□□□ -0.96
HDAC3-207ENST00000475549 CCDC30Q5VVM6 783 aa9.08□□□□□ -0.96
HDAC3-207ENST00000475549 CCDC191Q8NCU4 936 aa9.08□□□□□ -0.96
HDAC3-207ENST00000475549 TBC1D16Q8TBP0 767 aa9.08□□□□□ -0.96
HDAC3-207ENST00000475549 CCDC85AQ96PX6 553 aaPredicted RBP9.08□□□□□ -0.96
HDAC3-207ENST00000475549 DBNDD1Q9H9R9 158 aa9.08□□□□□ -0.96
HDAC3-207ENST00000475549 WBP1LQ9NX94 342 aa9.08□□□□□ -0.96
HDAC3-207ENST00000475549 MAP3K2Q9Y2U5 619 aa9.08□□□□□ -0.96
HDAC3-207ENST00000475549 SCN4AP35499 1836 aa9.08□□□□□ -0.96
HDAC3-207ENST00000475549 PI4KAP2A4QPH2 592 aa9.07□□□□□ -0.96
HDAC3-207ENST00000475549 PSMD14O00487 310 aa9.07□□□□□ -0.96
HDAC3-207ENST00000475549 TNIP1Q15025 636 aa9.07□□□□□ -0.96
HDAC3-207ENST00000475549 DOK7Q18PE1 504 aa9.07□□□□□ -0.96
HDAC3-207ENST00000475549 KSR2Q6VAB6 950 aa9.07□□□□□ -0.96
HDAC3-207ENST00000475549 TNS4Q8IZW8 715 aa9.07□□□□□ -0.96
HDAC3-207ENST00000475549 PI4KAP1Q8N8J0 262 aa9.07□□□□□ -0.96
HDAC3-207ENST00000475549 TRPM4Q8TD43 1214 aa9.07□□□□□ -0.96
HDAC3-207ENST00000475549 GLIS2Q9BZE0 524 aaPredicted RBP9.07□□□□□ -0.96
HDAC3-207ENST00000475549 PODXL2Q9NZ53 605 aa9.07□□□□□ -0.96
HDAC3-207ENST00000475549 CNOT7Q9UIV1 285 aaKnown RBP9.07□□□□□ -0.96
HDAC3-207ENST00000475549 RTL9Q8NET4 1388 aa9.07□□□□□ -0.96
HDAC3-207ENST00000475549 C6orf229H3BNL8 230 aa9.06□□□□□ -0.96
HDAC3-207ENST00000475549 CWF19L2Q2TBE0 894 aaKnown RBP9.06□□□□□ -0.96
HDAC3-207ENST00000475549 SAMD7Q7Z3H4 446 aa9.06□□□□□ -0.96
HDAC3-207ENST00000475549 DPF2Q92785 391 aa9.06□□□□□ -0.96
HDAC3-207ENST00000475549 SPINK5Q9NQ38 1064 aaPredicted RBP9.06□□□□□ -0.96
HDAC3-207ENST00000475549 CWC25Q9NXE8 425 aaPredicted RBP9.06□□□□□ -0.96
HDAC3-207ENST00000475549 ABT1Q9ULW3 272 aaKnown RBP9.06□□□□□ -0.96
HDAC3-207ENST00000475549 WDR33Q9C0J8 1336 aaKnown RBP9.05□□□□□ -0.96
HDAC3-207ENST00000475549 H7C1W4 665 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms