RNA–Protein interactions for RNA: ENST00000475491.1

KCNIP3-206, Transcript of potassium voltage-gated channel interacting protein 3, humanhuman

TSL 1 (best)

Gene KCNIP3, Length 3,658 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3-206ENST00000475491 KDM4AO75164 1064 aa13.8□□□□□ -0.2
KCNIP3-206ENST00000475491 HSP90AB4PQ58FF6 505 aa13.8□□□□□ -0.2
KCNIP3-206ENST00000475491 PRPF40BQ6NWY9 871 aaKnown RBP13.8□□□□□ -0.2
KCNIP3-206ENST00000475491 GIGYF2Q6Y7W6 1299 aaKnown RBP13.8□□□□□ -0.2
KCNIP3-206ENST00000475491 C5P01031 1676 aa13.8□□□□□ -0.2
KCNIP3-206ENST00000475491 SSFA2P28290 1259 aa13.8□□□□□ -0.2
KCNIP3-206ENST00000475491 CHMP4CQ96CF2 233 aa13.8□□□□□ -0.2
KCNIP3-206ENST00000475491 BCL9O00512 1426 aa13.8□□□□□ -0.2
KCNIP3-206ENST00000475491 JCADQ9P266 1359 aa13.79□□□□□ -0.2
KCNIP3-206ENST00000475491 H7C1W4 665 aa13.79□□□□□ -0.2
KCNIP3-206ENST00000475491 NMIQ13287 307 aaPredicted RBP13.79□□□□□ -0.2
KCNIP3-206ENST00000475491 CCDC191Q8NCU4 936 aa13.79□□□□□ -0.2
KCNIP3-206ENST00000475491 CHMP5Q9NZZ3 219 aa13.79□□□□□ -0.2
KCNIP3-206ENST00000475491 CEP126Q9P2H0 1117 aa13.79□□□□□ -0.2
KCNIP3-206ENST00000475491 GPATCH3Q96I76 525 aa13.79□□□□□ -0.2
KCNIP3-206ENST00000475491 A0A1B0GUL7 405 aa13.79□□□□□ -0.2
KCNIP3-206ENST00000475491 C3orf67Q6ZVT6 689 aa13.79□□□□□ -0.2
KCNIP3-206ENST00000475491 LRRC2Q9BYS8 371 aa13.79□□□□□ -0.2
KCNIP3-206ENST00000475491 TAF6LQ9Y6J9 622 aa13.79□□□□□ -0.2
KCNIP3-206ENST00000475491 A0A0D9SFI3 127 aa13.78□□□□□ -0.2
KCNIP3-206ENST00000475491 K7ELQ4 463 aaPredicted RBP13.78□□□□□ -0.2
KCNIP3-206ENST00000475491 RFX5P48382 616 aaPredicted RBP13.78□□□□□ -0.2
KCNIP3-206ENST00000475491 FOSBP53539 338 aa13.78□□□□□ -0.2
KCNIP3-206ENST00000475491 GLRX3O76003 335 aaKnown RBP13.78□□□□□ -0.2
KCNIP3-206ENST00000475491 RBM25P49756 843 aaKnown RBP13.78□□□□□ -0.2
KCNIP3-206ENST00000475491 CASP7P55210 303 aa13.78□□□□□ -0.2
KCNIP3-206ENST00000475491 SCARF1Q14162 830 aa13.78□□□□□ -0.2
KCNIP3-206ENST00000475491 SLC4A8Q2Y0W8 1093 aa13.78□□□□□ -0.2
KCNIP3-206ENST00000475491 FAM196AQ6ZSG2 479 aa13.78□□□□□ -0.2
KCNIP3-206ENST00000475491 VIRMAQ69YN4 1812 aaKnown RBP13.77□□□□□ -0.2
KCNIP3-206ENST00000475491 REC8O95072 547 aa13.77□□□□□ -0.2
KCNIP3-206ENST00000475491 WASHC4Q2M389 1173 aa13.77□□□□□ -0.2
KCNIP3-206ENST00000475491 RASEFQ8IZ41 740 aa13.77□□□□□ -0.2
KCNIP3-206ENST00000475491 TNPO1Q92973 898 aaKnown RBP13.77□□□□□ -0.2
KCNIP3-206ENST00000475491 TEX13AQ9BXU3 409 aaPredicted RBP13.77□□□□□ -0.2
KCNIP3-206ENST00000475491 A0A0G2JLW4 131 aa13.77□□□□□ -0.21
KCNIP3-206ENST00000475491 VPS72Q15906 364 aa13.77□□□□□ -0.21
KCNIP3-206ENST00000475491 ZNF589Q86UQ0 364 aaPredicted RBP13.77□□□□□ -0.21
KCNIP3-206ENST00000475491 ZNF219Q9P2Y4 722 aaPredicted RBP13.77□□□□□ -0.21
KCNIP3-206ENST00000475491 USP54Q70EL1 1684 aa13.77□□□□□ -0.21
KCNIP3-206ENST00000475491 AK9Q5TCS8 1911 aa13.77□□□□□ -0.21
KCNIP3-206ENST00000475491 KDM3BQ7LBC6 1761 aa13.77□□□□□ -0.21
KCNIP3-206ENST00000475491 MCM4P33991 863 aa13.77□□□□□ -0.21
KCNIP3-206ENST00000475491 MSL1Q68DK7 614 aa13.77□□□□□ -0.21
KCNIP3-206ENST00000475491 ATG9AQ7Z3C6 839 aa13.77□□□□□ -0.21
KCNIP3-206ENST00000475491 SCN11AQ9UI33 1791 aa13.76□□□□□ -0.21
KCNIP3-206ENST00000475491 ERFEQ4G0M1 354 aa13.76□□□□□ -0.21
KCNIP3-206ENST00000475491 GPR101Q96P66 508 aaPredicted RBP13.76□□□□□ -0.21
KCNIP3-206ENST00000475491 MPHOSPH8Q99549 860 aa13.76□□□□□ -0.21
KCNIP3-206ENST00000475491 CHST3Q7LGC8 479 aa13.76□□□□□ -0.21
KCNIP3-206ENST00000475491 RAB11FIP4Q86YS3 637 aa13.76□□□□□ -0.21
KCNIP3-206ENST00000475491 ERC1Q8IUD2 1116 aa13.76□□□□□ -0.21
KCNIP3-206ENST00000475491 ISCA1Q9BUE6 129 aa13.76□□□□□ -0.21
KCNIP3-206ENST00000475491 BCL9LQ86UU0 1499 aa13.76□□□□□ -0.21
KCNIP3-206ENST00000475491 EYA2O00167 538 aa13.76□□□□□ -0.21
KCNIP3-206ENST00000475491 HAND2P61296 217 aa13.76□□□□□ -0.21
KCNIP3-206ENST00000475491 STK3Q13188 491 aa13.76□□□□□ -0.21
KCNIP3-206ENST00000475491 TBC1D9BQ66K14 1250 aa13.76□□□□□ -0.21
KCNIP3-206ENST00000475491 TTLL11Q8NHH1 800 aa13.76□□□□□ -0.21
KCNIP3-206ENST00000475491 HDAC5Q9UQL6 1122 aa13.76□□□□□ -0.21
KCNIP3-206ENST00000475491 SALL3Q9BXA9 1300 aa13.75□□□□□ -0.21
KCNIP3-206ENST00000475491 IFIT1P09914 478 aaKnown RBP13.75□□□□□ -0.21
KCNIP3-206ENST00000475491 LRP6O75581 1613 aa13.75□□□□□ -0.21
KCNIP3-206ENST00000475491 ZPR1O75312 459 aa13.75□□□□□ -0.21
KCNIP3-206ENST00000475491 IDH1O75874 414 aaKnown RBP13.75□□□□□ -0.21
KCNIP3-206ENST00000475491 TTC39AQ5SRH9 613 aa13.75□□□□□ -0.21
KCNIP3-206ENST00000475491 ZBTB38Q8NAP3 1195 aaPredicted RBP13.75□□□□□ -0.21
KCNIP3-206ENST00000475491 EIF5P55010 431 aaKnown RBP13.75□□□□□ -0.21
KCNIP3-206ENST00000475491 NHSL1Q5SYE7 1610 aa13.74□□□□□ -0.21
KCNIP3-206ENST00000475491 TRAK2O60296 914 aa13.74□□□□□ -0.21
KCNIP3-206ENST00000475491 ADCK5Q3MIX3 580 aa13.74□□□□□ -0.21
KCNIP3-206ENST00000475491 LRRC4BQ9NT99 713 aa13.74□□□□□ -0.21
KCNIP3-206ENST00000475491 ANKRD18BA2A2Z9 1011 aa13.74□□□□□ -0.21
KCNIP3-206ENST00000475491 MTX1Q13505 466 aa13.74□□□□□ -0.21
KCNIP3-206ENST00000475491 MCTP1Q6DN14 999 aa13.74□□□□□ -0.21
KCNIP3-206ENST00000475491 VPS53Q5VIR6 699 aa13.74□□□□□ -0.21
KCNIP3-206ENST00000475491 DHX37Q8IY37 1157 aaKnown RBP13.74□□□□□ -0.21
KCNIP3-206ENST00000475491 XAGE2Q96GT9 111 aa13.74□□□□□ -0.21
KCNIP3-206ENST00000475491 UTP14AQ9BVJ6 771 aaKnown RBP13.74□□□□□ -0.21
KCNIP3-206ENST00000475491 COPRSQ9NQ92 184 aa13.74□□□□□ -0.21
KCNIP3-206ENST00000475491 ST18O60284 1047 aa13.73□□□□□ -0.21
KCNIP3-206ENST00000475491 RFC4P35249 363 aa13.73□□□□□ -0.21
KCNIP3-206ENST00000475491 IL6STP40189 918 aaPredicted RBP13.73□□□□□ -0.21
KCNIP3-206ENST00000475491 CTSWP56202 376 aa13.73□□□□□ -0.21
KCNIP3-206ENST00000475491 L1TD1Q5T7N2 865 aaKnown RBP13.73□□□□□ -0.21
KCNIP3-206ENST00000475491 NBPF5PQ86XG9 351 aaPredicted RBP13.73□□□□□ -0.21
KCNIP3-206ENST00000475491 BBXQ8WY36 941 aaPredicted RBP13.73□□□□□ -0.21
KCNIP3-206ENST00000475491 RRAGDQ9NQL2 400 aaPredicted RBP13.73□□□□□ -0.21
KCNIP3-206ENST00000475491 KCPQ6ZWJ8 1503 aa13.73□□□□□ -0.21
KCNIP3-206ENST00000475491 CASTP20810 708 aaKnown RBP13.73□□□□□ -0.21
KCNIP3-206ENST00000475491 AK7Q96M32 723 aa13.73□□□□□ -0.21
KCNIP3-206ENST00000475491 JAKMIP1Q96N16 626 aaKnown RBP13.73□□□□□ -0.21
KCNIP3-206ENST00000475491 THRAP3Q9Y2W1 955 aaKnown RBP13.73□□□□□ -0.21
KCNIP3-206ENST00000475491 ZAP70P43403 619 aa13.72□□□□□ -0.21
KCNIP3-206ENST00000475491 CDCA7Q9BWT1 371 aaPredicted RBP13.72□□□□□ -0.21
KCNIP3-206ENST00000475491 CRYBG1Q9Y4K1 1723 aa13.72□□□□□ -0.21
KCNIP3-206ENST00000475491 CAMTA2O94983 1202 aa13.72□□□□□ -0.21
KCNIP3-206ENST00000475491 FNBP4Q8N3X1 1017 aaPredicted RBP13.72□□□□□ -0.21
KCNIP3-206ENST00000475491 STAP2Q9UGK3 403 aa13.72□□□□□ -0.21
KCNIP3-206ENST00000475491 DISP2A7MBM2 1401 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms