RNA–Protein interactions for RNA: ENST00000474042.5

COPS7B-219, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-219ENST00000474042 DPP8Q6V1X1 898 aaPredicted RBP17.46■□□□□ 0.39
COPS7B-219ENST00000474042 DDX46Q7L014 1031 aaKnown RBP17.46■□□□□ 0.39
COPS7B-219ENST00000474042 GPRC5DQ9NZD1 345 aa17.46■□□□□ 0.39
COPS7B-219ENST00000474042 ZNRF3Q9ULT6 936 aa17.46■□□□□ 0.39
COPS7B-219ENST00000474042 LAS1LQ9Y4W2 734 aaKnown RBP17.46■□□□□ 0.39
COPS7B-219ENST00000474042 CDHR2Q9BYE9 1310 aa17.46■□□□□ 0.38
COPS7B-219ENST00000474042 CXCL9Q07325 125 aa17.45■□□□□ 0.38
COPS7B-219ENST00000474042 TMC4Q7Z404 712 aa17.45■□□□□ 0.38
COPS7B-219ENST00000474042 MPNDQ8N594 471 aa17.45■□□□□ 0.38
COPS7B-219ENST00000474042 CFAP44Q96MT7 982 aa17.45■□□□□ 0.38
COPS7B-219ENST00000474042 ADARB2Q9NS39 739 aaKnown RBP17.45■□□□□ 0.38
COPS7B-219ENST00000474042 DBF4Q9UBU7 674 aaPredicted RBP17.45■□□□□ 0.38
COPS7B-219ENST00000474042 CAPN15O75808 1086 aa17.44■□□□□ 0.38
COPS7B-219ENST00000474042 DEFB115Q30KQ5 88 aa17.44■□□□□ 0.38
COPS7B-219ENST00000474042 ANKRD13DQ6ZTN6 518 aa17.44■□□□□ 0.38
COPS7B-219ENST00000474042 PRDM10Q9NQV6 1147 aa17.44■□□□□ 0.38
COPS7B-219ENST00000474042 WBP1LQ9NX94 342 aa17.44■□□□□ 0.38
COPS7B-219ENST00000474042 ZNF853P0CG23 659 aa17.43■□□□□ 0.38
COPS7B-219ENST00000474042 FMR1Q06787 632 aaKnown RBP eCLIP17.43■□□□□ 0.38
COPS7B-219ENST00000474042 DUSP27Q5VZP5 1158 aa17.43■□□□□ 0.38
COPS7B-219ENST00000474042 PRKRIP1Q9H875 184 aaPredicted RBP17.43■□□□□ 0.38
COPS7B-219ENST00000474042 MBIPQ9NS73 344 aa17.43■□□□□ 0.38
COPS7B-219ENST00000474042 HYPKQ9NX55 129 aa17.43■□□□□ 0.38
COPS7B-219ENST00000474042 CTCFP49711 727 aaPredicted RBP17.42■□□□□ 0.38
COPS7B-219ENST00000474042 GMPSP49915 693 aaPredicted RBP17.42■□□□□ 0.38
COPS7B-219ENST00000474042 SF3B3Q15393 1217 aaKnown RBP17.42■□□□□ 0.38
COPS7B-219ENST00000474042 CIAPIN1Q6FI81 312 aa17.42■□□□□ 0.38
COPS7B-219ENST00000474042 AIDAQ96BJ3 306 aa17.42■□□□□ 0.38
COPS7B-219ENST00000474042 ABT1Q9ULW3 272 aaKnown RBP17.42■□□□□ 0.38
COPS7B-219ENST00000474042 WDR33Q9C0J8 1336 aaKnown RBP17.42■□□□□ 0.38
COPS7B-219ENST00000474042 YDJCA8MPS7 323 aa17.41■□□□□ 0.38
COPS7B-219ENST00000474042 ATP5J2-PTCD1G3V325 749 aa17.41■□□□□ 0.38
COPS7B-219ENST00000474042 TRAF5O00463 557 aa17.41■□□□□ 0.38
COPS7B-219ENST00000474042 TRIM28Q13263 835 aaKnown RBP17.41■□□□□ 0.38
COPS7B-219ENST00000474042 ZNF428Q96B54 188 aa17.41■□□□□ 0.38
COPS7B-219ENST00000474042 FAM89AQ96GI7 184 aa17.41■□□□□ 0.38
COPS7B-219ENST00000474042 RAD17O75943 681 aa17.4■□□□□ 0.38
COPS7B-219ENST00000474042 CST9Q5W186 159 aa17.4■□□□□ 0.38
COPS7B-219ENST00000474042 CELF1Q92879 486 aaKnown RBP17.4■□□□□ 0.38
COPS7B-219ENST00000474042 IFT57Q9NWB7 429 aa17.4■□□□□ 0.38
COPS7B-219ENST00000474042 TNIP1Q15025 636 aa17.39■□□□□ 0.37
COPS7B-219ENST00000474042 PGAP2Q9UHJ9 254 aa17.39■□□□□ 0.37
COPS7B-219ENST00000474042 TLL2Q9Y6L7 1015 aa17.39■□□□□ 0.37
COPS7B-219ENST00000474042 SCN9AQ15858 1988 aa17.39■□□□□ 0.37
COPS7B-219ENST00000474042 PSME4Q14997 1843 aa17.38■□□□□ 0.37
COPS7B-219ENST00000474042 HSPA8P11142 646 aaKnown RBP17.38■□□□□ 0.37
COPS7B-219ENST00000474042 TRPM4Q8TD43 1214 aa17.38■□□□□ 0.37
COPS7B-219ENST00000474042 IRS4O14654 1257 aaPredicted RBP17.37■□□□□ 0.37
COPS7B-219ENST00000474042 APAF1O14727 1248 aa17.37■□□□□ 0.37
COPS7B-219ENST00000474042 HIRAP54198 1017 aaPredicted RBP17.37■□□□□ 0.37
COPS7B-219ENST00000474042 MAP2K1Q02750 393 aaPredicted RBP17.37■□□□□ 0.37
COPS7B-219ENST00000474042 ZC3H15Q8WU90 426 aaKnown RBP17.37■□□□□ 0.37
COPS7B-219ENST00000474042 CAPNS2Q96L46 248 aa17.37■□□□□ 0.37
COPS7B-219ENST00000474042 ECE1P42892 770 aa17.36■□□□□ 0.37
COPS7B-219ENST00000474042 LBX1P52954 281 aa17.36■□□□□ 0.37
COPS7B-219ENST00000474042 GNAI1P63096 354 aa17.36■□□□□ 0.37
COPS7B-219ENST00000474042 CALD1Q05682 793 aaKnown RBP17.36■□□□□ 0.37
COPS7B-219ENST00000474042 GOLGA2Q08379 1002 aa17.36■□□□□ 0.37
COPS7B-219ENST00000474042 BCL2L13Q9BXK5 485 aa17.36■□□□□ 0.37
COPS7B-219ENST00000474042 GLIS2Q9BZE0 524 aaPredicted RBP17.36■□□□□ 0.37
COPS7B-219ENST00000474042 MYH3P11055 1940 aa17.35■□□□□ 0.37
COPS7B-219ENST00000474042 SHTN1A0MZ66 631 aa17.35■□□□□ 0.37
COPS7B-219ENST00000474042 GPSM2P81274 684 aa17.35■□□□□ 0.37
COPS7B-219ENST00000474042 WASHC4Q2M389 1173 aa17.35■□□□□ 0.37
COPS7B-219ENST00000474042 RTL5Q5HYW3 569 aaPredicted RBP17.35■□□□□ 0.37
COPS7B-219ENST00000474042 CYP4F22Q6NT55 531 aa17.35■□□□□ 0.37
COPS7B-219ENST00000474042 ZBTB38Q8NAP3 1195 aaPredicted RBP17.35■□□□□ 0.37
COPS7B-219ENST00000474042 PHAXQ9H814 394 aaKnown RBP17.35■□□□□ 0.37
COPS7B-219ENST00000474042 POLLQ9UGP5 575 aa17.35■□□□□ 0.37
COPS7B-219ENST00000474042 ZNF609O15014 1411 aa17.34■□□□□ 0.37
COPS7B-219ENST00000474042 RIC3Q7Z5B4 369 aa17.34■□□□□ 0.37
COPS7B-219ENST00000474042 SAPCD2Q86UD0 394 aa17.34■□□□□ 0.37
COPS7B-219ENST00000474042 MICALL2Q8IY33 904 aa17.34■□□□□ 0.37
COPS7B-219ENST00000474042 RTL9Q8NET4 1388 aa17.34■□□□□ 0.37
COPS7B-219ENST00000474042 DPF2Q92785 391 aa17.34■□□□□ 0.37
COPS7B-219ENST00000474042 DBNDD1Q9H9R9 158 aa17.34■□□□□ 0.37
COPS7B-219ENST00000474042 CNOT7Q9UIV1 285 aaKnown RBP17.34■□□□□ 0.37
COPS7B-219ENST00000474042 NSFL1CQ9UNZ2 370 aaKnown RBP17.34■□□□□ 0.37
COPS7B-219ENST00000474042 PSMD14O00487 310 aa17.33■□□□□ 0.36
COPS7B-219ENST00000474042 CELF2O95319 508 aaKnown RBP17.33■□□□□ 0.36
COPS7B-219ENST00000474042 PAXIP1Q6ZW49 1069 aaPredicted RBP17.33■□□□□ 0.36
COPS7B-219ENST00000474042 C8orf58Q8NAV2 365 aa17.33■□□□□ 0.36
COPS7B-219ENST00000474042 CCDC191Q8NCU4 936 aa17.33■□□□□ 0.36
COPS7B-219ENST00000474042 HHIPL1Q96JK4 782 aa17.33■□□□□ 0.36
COPS7B-219ENST00000474042 GPR101Q96P66 508 aaPredicted RBP17.33■□□□□ 0.36
COPS7B-219ENST00000474042 ZBTB12Q9Y330 459 aaPredicted RBP17.33■□□□□ 0.36
COPS7B-219ENST00000474042 SPEF2Q9C093 1822 aa17.33■□□□□ 0.36
COPS7B-219ENST00000474042 ECE2O60344 883 aa17.32■□□□□ 0.36
COPS7B-219ENST00000474042 PCCAP05165 728 aaPredicted RBP17.32■□□□□ 0.36
COPS7B-219ENST00000474042 RPS8P62241 208 aaKnown RBP17.32■□□□□ 0.36
COPS7B-219ENST00000474042 TBC1D16Q8TBP0 767 aa17.32■□□□□ 0.36
COPS7B-219ENST00000474042 EYA3Q99504 573 aa17.32■□□□□ 0.36
COPS7B-219ENST00000474042 MYD88Q99836 296 aa17.32■□□□□ 0.36
COPS7B-219ENST00000474042 PODXL2Q9NZ53 605 aa17.32■□□□□ 0.36
COPS7B-219ENST00000474042 ZNF646O15015 1829 aaPredicted RBP17.32■□□□□ 0.36
COPS7B-219ENST00000474042 POLR2AP24928 1970 aaKnown RBP17.31■□□□□ 0.36
COPS7B-219ENST00000474042 C6orf229H3BNL8 230 aa17.31■□□□□ 0.36
COPS7B-219ENST00000474042 H7C1D1 291 aa17.31■□□□□ 0.36
COPS7B-219ENST00000474042 ELL2O00472 640 aaPredicted RBP17.31■□□□□ 0.36
COPS7B-219ENST00000474042 HSP90B1P14625 803 aaKnown RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms