RNA–Protein interactions for RNA: ENST00000460308.6

ABCD4-202, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 1,003 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-202ENST00000460308 SRCIN1Q9C0H9 1055 aa27.16■■□□□ 1.94
ABCD4-202ENST00000460308 SBF1O95248 1867 aa27.16■■□□□ 1.94
ABCD4-202ENST00000460308 FER1L6Q2WGJ9 1857 aa27.15■■□□□ 1.94
ABCD4-202ENST00000460308 RARSP54136 660 aaKnown RBP27.15■■□□□ 1.94
ABCD4-202ENST00000460308 GRIPAP1Q4V328 841 aa27.15■■□□□ 1.94
ABCD4-202ENST00000460308 ALDH1L1O75891 902 aa27.14■■□□□ 1.94
ABCD4-202ENST00000460308 LTBP3Q9NS15 1303 aa27.14■■□□□ 1.93
ABCD4-202ENST00000460308 CCDC88AQ3V6T2 1871 aa27.13■■□□□ 1.93
ABCD4-202ENST00000460308 FKBP4Q02790 459 aaKnown RBP eCLIP27.13■■□□□ 1.93
ABCD4-202ENST00000460308 ATP6V0A2Q9Y487 856 aa27.13■■□□□ 1.93
ABCD4-202ENST00000460308 TMC4Q7Z404 712 aa27.12■■□□□ 1.93
ABCD4-202ENST00000460308 CCDC85AQ96PX6 553 aaPredicted RBP27.12■■□□□ 1.93
ABCD4-202ENST00000460308 C9orf78Q9NZ63 289 aaPredicted RBP27.12■■□□□ 1.93
ABCD4-202ENST00000460308 NOB1Q9ULX3 412 aaKnown RBP27.12■■□□□ 1.93
ABCD4-202ENST00000460308 BRPF1P55201 1214 aaPredicted RBP27.11■■□□□ 1.93
ABCD4-202ENST00000460308 CTSWP56202 376 aa27.11■■□□□ 1.93
ABCD4-202ENST00000460308 SP8Q8IXZ3 490 aa27.11■■□□□ 1.93
ABCD4-202ENST00000460308 TAF1P21675 1872 aa27.1■■□□□ 1.93
ABCD4-202ENST00000460308 RPS8P62241 208 aaKnown RBP27.1■■□□□ 1.93
ABCD4-202ENST00000460308 CELF1Q92879 486 aaKnown RBP27.1■■□□□ 1.93
ABCD4-202ENST00000460308 GRM8O00222 908 aa27.09■■□□□ 1.93
ABCD4-202ENST00000460308 PRELPP51888 382 aa27.09■■□□□ 1.93
ABCD4-202ENST00000460308 ZNF526Q8TF50 670 aaPredicted RBP27.09■■□□□ 1.93
ABCD4-202ENST00000460308 API5Q9BZZ5 524 aaKnown RBP27.09■■□□□ 1.93
ABCD4-202ENST00000460308 SEC31BQ9NQW1 1179 aa27.09■■□□□ 1.93
ABCD4-202ENST00000460308 CASP7P55210 303 aa27.08■■□□□ 1.93
ABCD4-202ENST00000460308 TTLL11Q8NHH1 800 aa27.08■■□□□ 1.93
ABCD4-202ENST00000460308 PSMD1Q99460 953 aa27.08■■□□□ 1.93
ABCD4-202ENST00000460308 PLA2G12BQ9BX93 195 aa27.08■■□□□ 1.93
ABCD4-202ENST00000460308 KIF16BQ96L93 1317 aa27.08■■□□□ 1.93
ABCD4-202ENST00000460308 MYH3P11055 1940 aa27.08■■□□□ 1.93
ABCD4-202ENST00000460308 GPBP1L1Q9HC44 474 aaPredicted RBP27.07■■□□□ 1.92
ABCD4-202ENST00000460308 ZNF277Q9NRM2 450 aaPredicted RBP27.07■■□□□ 1.92
ABCD4-202ENST00000460308 CDC5LQ99459 802 aaKnown RBP27.06■■□□□ 1.92
ABCD4-202ENST00000460308 ZC3H4Q9UPT8 1303 aaKnown RBP27.06■■□□□ 1.92
ABCD4-202ENST00000460308 IPO8O15397 1037 aaKnown RBP27.05■■□□□ 1.92
ABCD4-202ENST00000460308 DPP8Q6V1X1 898 aaPredicted RBP27.05■■□□□ 1.92
ABCD4-202ENST00000460308 ANKRD18AQ8IVF6 992 aa27.05■■□□□ 1.92
ABCD4-202ENST00000460308 MPNDQ8N594 471 aa27.05■■□□□ 1.92
ABCD4-202ENST00000460308 BCAR3O75815 825 aa27.04■■□□□ 1.92
ABCD4-202ENST00000460308 IARSP41252 1262 aaKnown RBP27.04■■□□□ 1.92
ABCD4-202ENST00000460308 SUPT20HQ8NEM7 779 aa27.04■■□□□ 1.92
ABCD4-202ENST00000460308 ARHGAP45Q92619 1136 aa27.04■■□□□ 1.92
ABCD4-202ENST00000460308 GREM2Q9H772 168 aa27.04■■□□□ 1.92
ABCD4-202ENST00000460308 SLC51AQ86UW1 340 aa27.03■■□□□ 1.92
ABCD4-202ENST00000460308 FRAT1Q92837 279 aaPredicted RBP27.03■■□□□ 1.92
ABCD4-202ENST00000460308 DICER1Q9UPY3 1922 aaKnown RBP27.03■■□□□ 1.92
ABCD4-202ENST00000460308 CCT4P50991 539 aaKnown RBP27.02■■□□□ 1.92
ABCD4-202ENST00000460308 KDM2BQ8NHM5 1336 aa27.01■■□□□ 1.91
ABCD4-202ENST00000460308 CSF1RP07333 972 aa27.01■■□□□ 1.91
ABCD4-202ENST00000460308 DPY19L2Q6NUT2 758 aa27.01■■□□□ 1.91
ABCD4-202ENST00000460308 JDP2Q8WYK2 163 aa27.01■■□□□ 1.91
ABCD4-202ENST00000460308 NSFL1CQ9UNZ2 370 aaKnown RBP27.01■■□□□ 1.91
ABCD4-202ENST00000460308 CHMP3Q9Y3E7 222 aa27.01■■□□□ 1.91
ABCD4-202ENST00000460308 SNED1Q8TER0 1413 aa27■■□□□ 1.91
ABCD4-202ENST00000460308 RTL9Q8NET4 1388 aa27■■□□□ 1.91
ABCD4-202ENST00000460308 ITGA6P23229 1130 aa27■■□□□ 1.91
ABCD4-202ENST00000460308 FOXO4P98177 505 aa27■■□□□ 1.91
ABCD4-202ENST00000460308 NBPF7P0C2Y1 421 aaPredicted RBP26.99■■□□□ 1.91
ABCD4-202ENST00000460308 IGHMBP2P38935 993 aaKnown RBP26.99■■□□□ 1.91
ABCD4-202ENST00000460308 LARGE2Q8N3Y3 721 aa26.99■■□□□ 1.91
ABCD4-202ENST00000460308 UTYO14607 1347 aa26.98■■□□□ 1.91
ABCD4-202ENST00000460308 ANKRD18BA2A2Z9 1011 aa26.98■■□□□ 1.91
ABCD4-202ENST00000460308 FAM161AQ3B820 660 aa26.98■■□□□ 1.91
ABCD4-202ENST00000460308 LMBR1LQ6UX01 489 aa26.98■■□□□ 1.91
ABCD4-202ENST00000460308 RTFDC1Q9BY42 306 aaPredicted RBP26.98■■□□□ 1.91
ABCD4-202ENST00000460308 VPS33BQ9H267 617 aa26.98■■□□□ 1.91
ABCD4-202ENST00000460308 TIAM2Q8IVF5 1701 aa26.97■■□□□ 1.91
ABCD4-202ENST00000460308 GLTPD2A6NH11 291 aa26.97■■□□□ 1.91
ABCD4-202ENST00000460308 PPIP5K2O43314 1243 aa26.97■■□□□ 1.91
ABCD4-202ENST00000460308 IFIT5Q13325 482 aaKnown RBP26.97■■□□□ 1.91
ABCD4-202ENST00000460308 SUCLG2Q96I99 432 aa26.97■■□□□ 1.91
ABCD4-202ENST00000460308 MPHOSPH8Q99549 860 aa26.97■■□□□ 1.91
ABCD4-202ENST00000460308 ANKIB1Q9P2G1 1089 aa26.97■■□□□ 1.91
ABCD4-202ENST00000460308 GPSM2P81274 684 aa26.96■■□□□ 1.91
ABCD4-202ENST00000460308 ZKSCAN2Q63HK3 967 aa26.96■■□□□ 1.91
ABCD4-202ENST00000460308 ATF7IPQ6VMQ6 1270 aa26.96■■□□□ 1.91
ABCD4-202ENST00000460308 USP44Q9H0E7 712 aa26.96■■□□□ 1.91
ABCD4-202ENST00000460308 BSDC1Q9NW68 430 aaPredicted RBP26.96■■□□□ 1.91
ABCD4-202ENST00000460308 C6orf229H3BNL8 230 aa26.95■■□□□ 1.9
ABCD4-202ENST00000460308 CCDC57Q2TAC2 916 aa26.95■■□□□ 1.9
ABCD4-202ENST00000460308 EPHA10Q5JZY3 1008 aa26.95■■□□□ 1.9
ABCD4-202ENST00000460308 COL4A1P02462 1669 aa26.95■■□□□ 1.9
ABCD4-202ENST00000460308 AOC3Q16853 763 aa26.94■■□□□ 1.9
ABCD4-202ENST00000460308 TAF7LQ5H9L4 462 aa26.94■■□□□ 1.9
ABCD4-202ENST00000460308 NIM1KQ8IY84 436 aa26.94■■□□□ 1.9
ABCD4-202ENST00000460308 LRRC37AA6NMS7 1700 aa26.93■■□□□ 1.9
ABCD4-202ENST00000460308 TRIM27P14373 513 aa26.93■■□□□ 1.9
ABCD4-202ENST00000460308 EYA3Q99504 573 aa26.93■■□□□ 1.9
ABCD4-202ENST00000460308 CLUAP1Q96AJ1 413 aa26.92■■□□□ 1.9
ABCD4-202ENST00000460308 BICC1Q9H694 974 aaKnown RBP26.92■■□□□ 1.9
ABCD4-202ENST00000460308 PODXL2Q9NZ53 605 aa26.92■■□□□ 1.9
ABCD4-202ENST00000460308 GGA1Q9UJY5 639 aa26.92■■□□□ 1.9
ABCD4-202ENST00000460308 HDAC5Q9UQL6 1122 aa26.92■■□□□ 1.9
ABCD4-202ENST00000460308 FZD9O00144 591 aa26.91■■□□□ 1.9
ABCD4-202ENST00000460308 EIF6P56537 245 aaKnown RBP26.91■■□□□ 1.9
ABCD4-202ENST00000460308 KIAA2012Q0VF49 1180 aa26.91■■□□□ 1.9
ABCD4-202ENST00000460308 WASHC4Q2M389 1173 aa26.91■■□□□ 1.9
ABCD4-202ENST00000460308 INTS3Q68E01 1043 aaKnown RBP26.91■■□□□ 1.9
ABCD4-202ENST00000460308 KAZALD1Q96I82 304 aa26.91■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms