RNA–Protein interactions for RNA: ENST00000457288.2

CBWD6-204, Transcript of COBW domain containing 6, human

TSL 3

Gene CBWD6, Length 449 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD6-204	ENST00000457288	ATP5J2-PTCD1	G3V325	749 aa		11.18	□□□□□ -0.62
CBWD6-204	ENST00000457288	TMC4	Q7Z404	712 aa		11.18	□□□□□ -0.62
CBWD6-204	ENST00000457288	TSPYL6	Q8N831	410 aa		11.18	□□□□□ -0.62
CBWD6-204	ENST00000457288	HACL1	Q9UJ83	578 aa		11.18	□□□□□ -0.62
CBWD6-204	ENST00000457288	TRPM7	Q96QT4	1865 aa		11.17	□□□□□ -0.62
CBWD6-204	ENST00000457288	ELL2	O00472	640 aa	Predicted RBP	11.17	□□□□□ -0.62
CBWD6-204	ENST00000457288	PPIP5K2	O43314	1243 aa		11.17	□□□□□ -0.62
CBWD6-204	ENST00000457288	EPHX2	P34913	555 aa		11.17	□□□□□ -0.62
CBWD6-204	ENST00000457288	SCNN1D	P51172	638 aa		11.17	□□□□□ -0.62
CBWD6-204	ENST00000457288	EIF6	P56537	245 aa	Known RBP	11.17	□□□□□ -0.62
CBWD6-204	ENST00000457288	GOLGA2	Q08379	1002 aa		11.17	□□□□□ -0.62
CBWD6-204	ENST00000457288	AOC3	Q16853	763 aa		11.17	□□□□□ -0.62
CBWD6-204	ENST00000457288	CCDC30	Q5VVM6	783 aa		11.17	□□□□□ -0.62
CBWD6-204	ENST00000457288	DDX46	Q7L014	1031 aa	Known RBP	11.17	□□□□□ -0.62
CBWD6-204	ENST00000457288	LARGE2	Q8N3Y3	721 aa		11.17	□□□□□ -0.62
CBWD6-204	ENST00000457288	FAM89A	Q96GI7	184 aa		11.17	□□□□□ -0.62
CBWD6-204	ENST00000457288	MRS2	Q9HD23	443 aa		11.17	□□□□□ -0.62
CBWD6-204	ENST00000457288	THSD7B	Q9C0I4	1608 aa		11.17	□□□□□ -0.62
CBWD6-204	ENST00000457288	SPEF2	Q9C093	1822 aa		11.16	□□□□□ -0.62
CBWD6-204	ENST00000457288	SCN9A	Q15858	1988 aa		11.16	□□□□□ -0.62
CBWD6-204	ENST00000457288	ITGBL1	O95965	494 aa	Predicted RBP	11.16	□□□□□ -0.62
CBWD6-204	ENST00000457288	KIAA2012	Q0VF49	1180 aa		11.16	□□□□□ -0.62
CBWD6-204	ENST00000457288	NIM1K	Q8IY84	436 aa		11.16	□□□□□ -0.62
CBWD6-204	ENST00000457288	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	11.16	□□□□□ -0.62
CBWD6-204	ENST00000457288	CCDC191	Q8NCU4	936 aa		11.16	□□□□□ -0.62
CBWD6-204	ENST00000457288	SUPT20H	Q8NEM7	779 aa		11.16	□□□□□ -0.62
CBWD6-204	ENST00000457288	TSR2	Q969E8	191 aa	Known RBP	11.16	□□□□□ -0.62
CBWD6-204	ENST00000457288	METTL22	Q9BUU2	404 aa	Predicted RBP	11.16	□□□□□ -0.62
CBWD6-204	ENST00000457288	CHMP4A	Q9BY43	222 aa		11.16	□□□□□ -0.62
CBWD6-204	ENST00000457288	CREBZF	Q9NS37	354 aa		11.16	□□□□□ -0.62
CBWD6-204	ENST00000457288	ZNF646	O15015	1829 aa	Predicted RBP	11.16	□□□□□ -0.62
CBWD6-204	ENST00000457288	CDHR2	Q9BYE9	1310 aa		11.15	□□□□□ -0.62
CBWD6-204	ENST00000457288	FANCI	Q9NVI1	1328 aa		11.15	□□□□□ -0.62
CBWD6-204	ENST00000457288	IRS4	O14654	1257 aa	Predicted RBP	11.15	□□□□□ -0.62
CBWD6-204	ENST00000457288	TCERG1	O14776	1098 aa	Known RBP	11.15	□□□□□ -0.62
CBWD6-204	ENST00000457288	ANP32C	O43423	234 aa		11.15	□□□□□ -0.62
CBWD6-204	ENST00000457288	PCCA	P05165	728 aa	Predicted RBP	11.15	□□□□□ -0.62
CBWD6-204	ENST00000457288	DPP8	Q6V1X1	898 aa	Predicted RBP	11.15	□□□□□ -0.62
CBWD6-204	ENST00000457288	RIC3	Q7Z5B4	369 aa		11.15	□□□□□ -0.62
CBWD6-204	ENST00000457288	PNMA8A	Q86V59	439 aa	Predicted RBP	11.15	□□□□□ -0.62
CBWD6-204	ENST00000457288	MPND	Q8N594	471 aa		11.15	□□□□□ -0.62
CBWD6-204	ENST00000457288	CELF1	Q92879	486 aa	Known RBP	11.15	□□□□□ -0.62
CBWD6-204	ENST00000457288	ZNF428	Q96B54	188 aa		11.15	□□□□□ -0.62
CBWD6-204	ENST00000457288	TWISTNB	Q3B726	338 aa	Predicted RBP	11.14	□□□□□ -0.63
CBWD6-204	ENST00000457288	MYD88	Q99836	296 aa		11.14	□□□□□ -0.63
CBWD6-204	ENST00000457288	TMX4	Q9H1E5	349 aa	Predicted RBP	11.14	□□□□□ -0.63
CBWD6-204	ENST00000457288		A0A1B0GUL6	1792 aa		11.13	□□□□□ -0.63
CBWD6-204	ENST00000457288	DDX58	O95786	925 aa	Known RBP	11.13	□□□□□ -0.63
CBWD6-204	ENST00000457288	IGKV5-2	P06315	115 aa		11.13	□□□□□ -0.63
CBWD6-204	ENST00000457288	CXCL9	Q07325	125 aa		11.13	□□□□□ -0.63
CBWD6-204	ENST00000457288	EAPP	Q56P03	285 aa	Predicted RBP	11.13	□□□□□ -0.63
CBWD6-204	ENST00000457288	KSR2	Q6VAB6	950 aa		11.13	□□□□□ -0.63
CBWD6-204	ENST00000457288	CWC25	Q9NXE8	425 aa	Predicted RBP	11.13	□□□□□ -0.63
CBWD6-204	ENST00000457288	ZNRF3	Q9ULT6	936 aa		11.13	□□□□□ -0.63
CBWD6-204	ENST00000457288	MAP3K2	Q9Y2U5	619 aa		11.13	□□□□□ -0.63
CBWD6-204	ENST00000457288	CNTNAP1	P78357	1384 aa		11.13	□□□□□ -0.63
CBWD6-204	ENST00000457288	ZNF609	O15014	1411 aa		11.12	□□□□□ -0.63
CBWD6-204	ENST00000457288	YDJC	A8MPS7	323 aa		11.12	□□□□□ -0.63
CBWD6-204	ENST00000457288	HSP90B1	P14625	803 aa	Known RBP	11.12	□□□□□ -0.63
CBWD6-204	ENST00000457288	LMOD1	P29536	600 aa	Predicted RBP	11.12	□□□□□ -0.63
CBWD6-204	ENST00000457288	EPS15	P42566	896 aa		11.12	□□□□□ -0.63
CBWD6-204	ENST00000457288	RTL5	Q5HYW3	569 aa	Predicted RBP	11.12	□□□□□ -0.63
CBWD6-204	ENST00000457288	WDR63	Q8IWG1	891 aa		11.12	□□□□□ -0.63
CBWD6-204	ENST00000457288	GPRC5D	Q9NZD1	345 aa		11.12	□□□□□ -0.63
CBWD6-204	ENST00000457288	GJA3	Q9Y6H8	435 aa		11.12	□□□□□ -0.63
CBWD6-204	ENST00000457288	RTL9	Q8NET4	1388 aa		11.12	□□□□□ -0.63
CBWD6-204	ENST00000457288	PI4KAP2	A4QPH2	592 aa		11.11	□□□□□ -0.63
CBWD6-204	ENST00000457288	PDE8A	O60658	829 aa		11.11	□□□□□ -0.63
CBWD6-204	ENST00000457288	RPS8	P62241	208 aa	Known RBP	11.11	□□□□□ -0.63
CBWD6-204	ENST00000457288	MAP1S	Q66K74	1059 aa	Predicted RBP	11.11	□□□□□ -0.63
CBWD6-204	ENST00000457288	CIAPIN1	Q6FI81	312 aa		11.11	□□□□□ -0.63
CBWD6-204	ENST00000457288	USP50	Q70EL3	339 aa	Predicted RBP	11.11	□□□□□ -0.63
CBWD6-204	ENST00000457288	G2E3	Q7L622	706 aa		11.11	□□□□□ -0.63
CBWD6-204	ENST00000457288	PI4KAP1	Q8N8J0	262 aa		11.11	□□□□□ -0.63
CBWD6-204	ENST00000457288	STK31	Q9BXU1	1019 aa		11.11	□□□□□ -0.63
CBWD6-204	ENST00000457288	PODXL2	Q9NZ53	605 aa		11.11	□□□□□ -0.63
CBWD6-204	ENST00000457288	POLL	Q9UGP5	575 aa		11.11	□□□□□ -0.63
CBWD6-204	ENST00000457288	NEURL1B	A8MQ27	555 aa		11.1	□□□□□ -0.63
CBWD6-204	ENST00000457288	CTSW	P56202	376 aa		11.1	□□□□□ -0.63
CBWD6-204	ENST00000457288	GPSM2	P81274	684 aa		11.1	□□□□□ -0.63
CBWD6-204	ENST00000457288	CCDC152	Q4G0S7	254 aa		11.1	□□□□□ -0.63
CBWD6-204	ENST00000457288	IFFO2	Q5TF58	517 aa		11.1	□□□□□ -0.63
CBWD6-204	ENST00000457288	CNTROB	Q8N137	903 aa		11.1	□□□□□ -0.63
CBWD6-204	ENST00000457288	SEC31B	Q9NQW1	1179 aa		11.1	□□□□□ -0.63
CBWD6-204	ENST00000457288	ADARB2	Q9NS39	739 aa	Known RBP	11.1	□□□□□ -0.63
CBWD6-204	ENST00000457288	ZNF521	Q96K83	1311 aa		11.09	□□□□□ -0.63
CBWD6-204	ENST00000457288	TMEM88B	A6NKF7	163 aa		11.09	□□□□□ -0.63
CBWD6-204	ENST00000457288	VAMP4	O75379	141 aa		11.09	□□□□□ -0.63
CBWD6-204	ENST00000457288	GMPS	P49915	693 aa	Predicted RBP	11.09	□□□□□ -0.63
CBWD6-204	ENST00000457288	FLII	Q13045	1269 aa		11.09	□□□□□ -0.63
CBWD6-204	ENST00000457288	CWF19L2	Q2TBE0	894 aa	Known RBP	11.09	□□□□□ -0.63
CBWD6-204	ENST00000457288	TBC1D16	Q8TBP0	767 aa		11.09	□□□□□ -0.63
CBWD6-204	ENST00000457288	SPINK5	Q9NQ38	1064 aa	Predicted RBP	11.09	□□□□□ -0.63
CBWD6-204	ENST00000457288	NSFL1C	Q9UNZ2	370 aa	Known RBP	11.09	□□□□□ -0.63
CBWD6-204	ENST00000457288	CLEC11A	Q9Y240	323 aa		11.09	□□□□□ -0.63
CBWD6-204	ENST00000457288	RASSF10	A6NK89	507 aa		11.08	□□□□□ -0.64
CBWD6-204	ENST00000457288	RAD17	O75943	681 aa		11.08	□□□□□ -0.64
CBWD6-204	ENST00000457288	SLC4A2	P04920	1241 aa		11.08	□□□□□ -0.64
CBWD6-204	ENST00000457288	HSPA1A	P0DMV8	641 aa	Known RBP	11.08	□□□□□ -0.64
CBWD6-204	ENST00000457288	HSPA1B	P0DMV9	641 aa	Known RBP	11.08	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms