RNA–Protein interactions for RNA: ENST00000436769.5

COL6A2-206, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 2

Gene COL6A2, Length 919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-206ENST00000436769 DPP8Q6V1X1 898 aaPredicted RBP26.27■■□□□ 1.8
COL6A2-206ENST00000436769 MPNDQ8N594 471 aa26.27■■□□□ 1.8
COL6A2-206ENST00000436769 SUPT20HQ8NEM7 779 aa26.27■■□□□ 1.8
COL6A2-206ENST00000436769 FAM89AQ96GI7 184 aa26.27■■□□□ 1.8
COL6A2-206ENST00000436769 IFT57Q9NWB7 429 aa26.27■■□□□ 1.8
COL6A2-206ENST00000436769 LMOD1P29536 600 aaPredicted RBP26.26■■□□□ 1.79
COL6A2-206ENST00000436769 TRIM28Q13263 835 aaKnown RBP26.26■■□□□ 1.79
COL6A2-206ENST00000436769 ZNRF3Q9ULT6 936 aa26.26■■□□□ 1.79
COL6A2-206ENST00000436769 CXCL9Q07325 125 aa26.25■■□□□ 1.79
COL6A2-206ENST00000436769 SF3B3Q15393 1217 aaKnown RBP26.25■■□□□ 1.79
COL6A2-206ENST00000436769 GNAI1P63096 354 aa26.24■■□□□ 1.79
COL6A2-206ENST00000436769 KIAA2012Q0VF49 1180 aa26.24■■□□□ 1.79
COL6A2-206ENST00000436769 LRRC37AA6NMS7 1700 aa26.23■■□□□ 1.79
COL6A2-206ENST00000436769 USP50Q70EL3 339 aaPredicted RBP26.23■■□□□ 1.79
COL6A2-206ENST00000436769 PHAXQ9H814 394 aaKnown RBP26.23■■□□□ 1.79
COL6A2-206ENST00000436769 DUOX1Q9NRD9 1551 aa26.22■■□□□ 1.79
COL6A2-206ENST00000436769 ELL2O00472 640 aaPredicted RBP26.22■■□□□ 1.79
COL6A2-206ENST00000436769 VEGFBP49765 207 aa26.22■■□□□ 1.79
COL6A2-206ENST00000436769 TMC4Q7Z404 712 aa26.22■■□□□ 1.79
COL6A2-206ENST00000436769 GPRC5DQ9NZD1 345 aa26.22■■□□□ 1.79
COL6A2-206ENST00000436769 COL4A1P02462 1669 aa26.22■■□□□ 1.79
COL6A2-206ENST00000436769 CALD1Q05682 793 aaKnown RBP26.21■■□□□ 1.79
COL6A2-206ENST00000436769 C8orf58Q8NAV2 365 aa26.21■■□□□ 1.79
COL6A2-206ENST00000436769 CELF1Q92879 486 aaKnown RBP26.21■■□□□ 1.79
COL6A2-206ENST00000436769 RTL5Q5HYW3 569 aaPredicted RBP26.2■■□□□ 1.78
COL6A2-206ENST00000436769 RASSF10A6NK89 507 aa26.19■■□□□ 1.78
COL6A2-206ENST00000436769 FMR1Q06787 632 aaKnown RBP eCLIP26.19■■□□□ 1.78
COL6A2-206ENST00000436769 CCDC184Q52MB2 194 aa26.19■■□□□ 1.78
COL6A2-206ENST00000436769 RIC3Q7Z5B4 369 aa26.19■■□□□ 1.78
COL6A2-206ENST00000436769 IRS4O14654 1257 aaPredicted RBP26.18■■□□□ 1.78
COL6A2-206ENST00000436769 GMPSP49915 693 aaPredicted RBP26.18■■□□□ 1.78
COL6A2-206ENST00000436769 ADARB2Q9NS39 739 aaKnown RBP26.18■■□□□ 1.78
COL6A2-206ENST00000436769 YDJCA8MPS7 323 aa26.17■■□□□ 1.78
COL6A2-206ENST00000436769 CIAPIN1Q6FI81 312 aa26.17■■□□□ 1.78
COL6A2-206ENST00000436769 TNS4Q8IZW8 715 aa26.17■■□□□ 1.78
COL6A2-206ENST00000436769 RAD17O75943 681 aa26.16■■□□□ 1.78
COL6A2-206ENST00000436769 GOLGA2Q08379 1002 aa26.16■■□□□ 1.78
COL6A2-206ENST00000436769 DEFB115Q30KQ5 88 aa26.16■■□□□ 1.78
COL6A2-206ENST00000436769 ZBTB38Q8NAP3 1195 aaPredicted RBP26.16■■□□□ 1.78
COL6A2-206ENST00000436769 TRPM7Q96QT4 1865 aa26.16■■□□□ 1.78
COL6A2-206ENST00000436769 NSFL1CQ9UNZ2 370 aaKnown RBP26.15■■□□□ 1.78
COL6A2-206ENST00000436769 FOXN1O15353 648 aa26.14■■□□□ 1.78
COL6A2-206ENST00000436769 TNIP1Q15025 636 aa26.14■■□□□ 1.78
COL6A2-206ENST00000436769 CST9Q5W186 159 aa26.14■■□□□ 1.78
COL6A2-206ENST00000436769 TSPYL6Q8N831 410 aa26.14■■□□□ 1.78
COL6A2-206ENST00000436769 MYD88Q99836 296 aa26.14■■□□□ 1.78
COL6A2-206ENST00000436769 POLLQ9UGP5 575 aa26.14■■□□□ 1.78
COL6A2-206ENST00000436769 PGAP2Q9UHJ9 254 aa26.14■■□□□ 1.78
COL6A2-206ENST00000436769 TRAF5O00463 557 aa26.13■■□□□ 1.77
COL6A2-206ENST00000436769 RPS8P62241 208 aaKnown RBP26.13■■□□□ 1.77
COL6A2-206ENST00000436769 GPSM2P81274 684 aa26.13■■□□□ 1.77
COL6A2-206ENST00000436769 CDHR2Q9BYE9 1310 aa26.13■■□□□ 1.77
COL6A2-206ENST00000436769 HIRAP54198 1017 aaPredicted RBP26.12■■□□□ 1.77
COL6A2-206ENST00000436769 WASHC4Q2M389 1173 aa26.12■■□□□ 1.77
COL6A2-206ENST00000436769 CCDC191Q8NCU4 936 aa26.12■■□□□ 1.77
COL6A2-206ENST00000436769 WBP1LQ9NX94 342 aa26.12■■□□□ 1.77
COL6A2-206ENST00000436769 CCDC30Q5VVM6 783 aa26.11■■□□□ 1.77
COL6A2-206ENST00000436769 METTL22Q9BUU2 404 aaPredicted RBP26.11■■□□□ 1.77
COL6A2-206ENST00000436769 SEC31BQ9NQW1 1179 aa26.11■■□□□ 1.77
COL6A2-206ENST00000436769 ABT1Q9ULW3 272 aaKnown RBP26.11■■□□□ 1.77
COL6A2-206ENST00000436769 PCCAP05165 728 aaPredicted RBP26.1■■□□□ 1.77
COL6A2-206ENST00000436769 CCDC27Q2M243 656 aa26.1■■□□□ 1.77
COL6A2-206ENST00000436769 BCL2L13Q9BXK5 485 aa26.1■■□□□ 1.77
COL6A2-206ENST00000436769 WDR33Q9C0J8 1336 aaKnown RBP26.1■■□□□ 1.77
COL6A2-206ENST00000436769 SHTN1A0MZ66 631 aa26.09■■□□□ 1.77
COL6A2-206ENST00000436769 RIMBP2O15034 1052 aa26.09■■□□□ 1.77
COL6A2-206ENST00000436769 CNOT7Q9UIV1 285 aaKnown RBP26.09■■□□□ 1.77
COL6A2-206ENST00000436769 C6orf229H3BNL8 230 aa26.08■■□□□ 1.77
COL6A2-206ENST00000436769 TBC1D16Q8TBP0 767 aa26.08■■□□□ 1.77
COL6A2-206ENST00000436769 TRPM4Q8TD43 1214 aa26.08■■□□□ 1.77
COL6A2-206ENST00000436769 ZC3H15Q8WU90 426 aaKnown RBP26.08■■□□□ 1.77
COL6A2-206ENST00000436769 JARID2Q92833 1246 aaPredicted RBP26.08■■□□□ 1.77
COL6A2-206ENST00000436769 TSR2Q969E8 191 aaKnown RBP26.08■■□□□ 1.77
COL6A2-206ENST00000436769 CHMP4AQ9BY43 222 aa26.08■■□□□ 1.77
COL6A2-206ENST00000436769 DBNDD1Q9H9R9 158 aa26.08■■□□□ 1.77
COL6A2-206ENST00000436769 CWC25Q9NXE8 425 aaPredicted RBP26.08■■□□□ 1.77
COL6A2-206ENST00000436769 ZBTB12Q9Y330 459 aaPredicted RBP26.08■■□□□ 1.77
COL6A2-206ENST00000436769 WWC1Q8IX03 1113 aa26.07■■□□□ 1.76
COL6A2-206ENST00000436769 KCNQ5Q9NR82 932 aa26.07■■□□□ 1.76
COL6A2-206ENST00000436769 PODXL2Q9NZ53 605 aa26.07■■□□□ 1.76
COL6A2-206ENST00000436769 PSMD14O00487 310 aa26.06■■□□□ 1.76
COL6A2-206ENST00000436769 PDE8AO60658 829 aa26.06■■□□□ 1.76
COL6A2-206ENST00000436769 DDX58O95786 925 aaKnown RBP26.06■■□□□ 1.76
COL6A2-206ENST00000436769 HSP90B1P14625 803 aaKnown RBP26.06■■□□□ 1.76
COL6A2-206ENST00000436769 DPF2Q92785 391 aa26.06■■□□□ 1.76
COL6A2-206ENST00000436769 GPR101Q96P66 508 aaPredicted RBP26.06■■□□□ 1.76
COL6A2-206ENST00000436769 GLIS2Q9BZE0 524 aaPredicted RBP26.06■■□□□ 1.76
COL6A2-206ENST00000436769 PRDM10Q9NQV6 1147 aa26.06■■□□□ 1.76
COL6A2-206ENST00000436769 MAP3K2Q9Y2U5 619 aa26.06■■□□□ 1.76
COL6A2-206ENST00000436769 IGKV5-2P06315 115 aa26.05■■□□□ 1.76
COL6A2-206ENST00000436769 CTCFP49711 727 aaPredicted RBP26.05■■□□□ 1.76
COL6A2-206ENST00000436769 KSR2Q6VAB6 950 aa26.05■■□□□ 1.76
COL6A2-206ENST00000436769 TLL2Q9Y6L7 1015 aa26.05■■□□□ 1.76
COL6A2-206ENST00000436769 SCN9AQ15858 1988 aa26.05■■□□□ 1.76
COL6A2-206ENST00000436769 POLR2AP24928 1970 aaKnown RBP26.04■■□□□ 1.76
COL6A2-206ENST00000436769 PI4KAP2A4QPH2 592 aa26.04■■□□□ 1.76
COL6A2-206ENST00000436769 H7C1D1 291 aa26.04■■□□□ 1.76
COL6A2-206ENST00000436769 DOK7Q18PE1 504 aa26.04■■□□□ 1.76
COL6A2-206ENST00000436769 CCDC152Q4G0S7 254 aa26.04■■□□□ 1.76
COL6A2-206ENST00000436769 MICALL2Q8IY33 904 aa26.04■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms