RNA–Protein interactions for RNA: ENST00000427118.1

AFF3-208, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 4

Gene AFF3, Length 528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-208ENST00000427118 TRIM28Q13263 835 aaKnown RBP20.29■□□□□ 0.84
AFF3-208ENST00000427118 CEP350Q5VT06 3117 aa20.29■□□□□ 0.84
AFF3-208ENST00000427118 COL4A5P29400 1685 aa20.29■□□□□ 0.84
AFF3-208ENST00000427118 RTKN2Q8IZC4 609 aa20.28■□□□□ 0.84
AFF3-208ENST00000427118 MAP3K2Q9Y2U5 619 aa20.28■□□□□ 0.84
AFF3-208ENST00000427118 PI4KAP2A4QPH2 592 aa20.27■□□□□ 0.84
AFF3-208ENST00000427118 FLIIQ13045 1269 aa20.27■□□□□ 0.84
AFF3-208ENST00000427118 ALDH1L2Q3SY69 923 aa20.27■□□□□ 0.84
AFF3-208ENST00000427118 PI4KAP1Q8N8J0 262 aa20.27■□□□□ 0.84
AFF3-208ENST00000427118 METTL22Q9BUU2 404 aaPredicted RBP20.27■□□□□ 0.84
AFF3-208ENST00000427118 KSR2Q6VAB6 950 aa20.26■□□□□ 0.83
AFF3-208ENST00000427118 WDR90Q96KV7 1748 aa20.26■□□□□ 0.83
AFF3-208ENST00000427118 POTECB2RU33 542 aa20.25■□□□□ 0.83
AFF3-208ENST00000427118 IRS4O14654 1257 aaPredicted RBP20.25■□□□□ 0.83
AFF3-208ENST00000427118 IGKV5-2P06315 115 aa20.25■□□□□ 0.83
AFF3-208ENST00000427118 IARSP41252 1262 aaKnown RBP20.25■□□□□ 0.83
AFF3-208ENST00000427118 IPO8O15397 1037 aaKnown RBP20.24■□□□□ 0.83
AFF3-208ENST00000427118 TOMM70O94826 608 aa20.24■□□□□ 0.83
AFF3-208ENST00000427118 DDNO94850 711 aaPredicted RBP20.24■□□□□ 0.83
AFF3-208ENST00000427118 FKBP5Q13451 457 aaPredicted RBP20.24■□□□□ 0.83
AFF3-208ENST00000427118 DDX46Q7L014 1031 aaKnown RBP20.24■□□□□ 0.83
AFF3-208ENST00000427118 ZBTB38Q8NAP3 1195 aaPredicted RBP20.24■□□□□ 0.83
AFF3-208ENST00000427118 SSH1Q8WYL5 1049 aa20.24■□□□□ 0.83
AFF3-208ENST00000427118 PSMD1Q99460 953 aa20.24■□□□□ 0.83
AFF3-208ENST00000427118 ATP6V0A2Q9Y487 856 aa20.24■□□□□ 0.83
AFF3-208ENST00000427118 ZNF541Q9H0D2 1346 aa20.24■□□□□ 0.83
AFF3-208ENST00000427118 GRAPQ13588 217 aa20.23■□□□□ 0.83
AFF3-208ENST00000427118 C20orf194Q5TEA3 1177 aa20.23■□□□□ 0.83
AFF3-208ENST00000427118 ZKSCAN2Q63HK3 967 aa20.23■□□□□ 0.83
AFF3-208ENST00000427118 MRPL50Q8N5N7 158 aaKnown RBP20.23■□□□□ 0.83
AFF3-208ENST00000427118 CCDC191Q8NCU4 936 aa20.23■□□□□ 0.83
AFF3-208ENST00000427118 GRAPLQ8TC17 118 aaPredicted RBP20.23■□□□□ 0.83
AFF3-208ENST00000427118 SMC4Q9NTJ3 1288 aa20.23■□□□□ 0.83
AFF3-208ENST00000427118 CWC25Q9NXE8 425 aaPredicted RBP20.23■□□□□ 0.83
AFF3-208ENST00000427118 KIF16BQ96L93 1317 aa20.23■□□□□ 0.83
AFF3-208ENST00000427118 SF3B3Q15393 1217 aaKnown RBP20.22■□□□□ 0.83
AFF3-208ENST00000427118 CWF19L2Q2TBE0 894 aaKnown RBP20.22■□□□□ 0.83
AFF3-208ENST00000427118 CC2D2BQ6DHV5 1058 aa20.22■□□□□ 0.83
AFF3-208ENST00000427118 FRAT1Q92837 279 aaPredicted RBP20.22■□□□□ 0.83
AFF3-208ENST00000427118 CELF1Q92879 486 aaKnown RBP20.22■□□□□ 0.83
AFF3-208ENST00000427118 PCCAP05165 728 aaPredicted RBP20.21■□□□□ 0.83
AFF3-208ENST00000427118 BRPF1P55201 1214 aaPredicted RBP20.21■□□□□ 0.83
AFF3-208ENST00000427118 NEXNQ0ZGT2 675 aa20.21■□□□□ 0.83
AFF3-208ENST00000427118 C16orf71Q8IYS4 520 aaPredicted RBP20.21■□□□□ 0.83
AFF3-208ENST00000427118 LRRC37AA6NMS7 1700 aa20.21■□□□□ 0.83
AFF3-208ENST00000427118 BBOX1O75936 387 aa20.2■□□□□ 0.82
AFF3-208ENST00000427118 DPY19L2Q6NUT2 758 aa20.2■□□□□ 0.82
AFF3-208ENST00000427118 RBM46Q8TBY0 533 aaKnown RBP20.2■□□□□ 0.82
AFF3-208ENST00000427118 DNAAF4Q8WXU2 420 aa20.2■□□□□ 0.82
AFF3-208ENST00000427118 DUOX1Q9NRD9 1551 aa20.2■□□□□ 0.82
AFF3-208ENST00000427118 VEGFAP15692 232 aaPredicted RBP20.19■□□□□ 0.82
AFF3-208ENST00000427118 HSPA6P17066 643 aa20.19■□□□□ 0.82
AFF3-208ENST00000427118 SP8Q8IXZ3 490 aa20.19■□□□□ 0.82
AFF3-208ENST00000427118 CCDC85AQ96PX6 553 aaPredicted RBP20.19■□□□□ 0.82
AFF3-208ENST00000427118 BCL2L13Q9BXK5 485 aa20.19■□□□□ 0.82
AFF3-208ENST00000427118 SEC31BQ9NQW1 1179 aa20.19■□□□□ 0.82
AFF3-208ENST00000427118 MYH3P11055 1940 aa20.18■□□□□ 0.82
AFF3-208ENST00000427118 NEURL1BA8MQ27 555 aa20.18■□□□□ 0.82
AFF3-208ENST00000427118 FZD9O00144 591 aa20.18■□□□□ 0.82
AFF3-208ENST00000427118 PTPRCP08575 1304 aa20.18■□□□□ 0.82
AFF3-208ENST00000427118 F6X3S4 739 aa20.17■□□□□ 0.82
AFF3-208ENST00000427118 AOC3Q16853 763 aa20.17■□□□□ 0.82
AFF3-208ENST00000427118 FTSJ3Q8IY81 847 aaKnown RBP20.17■□□□□ 0.82
AFF3-208ENST00000427118 LARGE2Q8N3Y3 721 aa20.17■□□□□ 0.82
AFF3-208ENST00000427118 PPIP5K2O43314 1243 aa20.16■□□□□ 0.82
AFF3-208ENST00000427118 PDE8AO60658 829 aa20.16■□□□□ 0.82
AFF3-208ENST00000427118 POTEIP0CG38 1075 aa20.16■□□□□ 0.82
AFF3-208ENST00000427118 POTEJP0CG39 1038 aa20.16■□□□□ 0.82
AFF3-208ENST00000427118 DPP8Q6V1X1 898 aaPredicted RBP20.16■□□□□ 0.82
AFF3-208ENST00000427118 CENPQQ7L2Z9 268 aaPredicted RBP20.16■□□□□ 0.82
AFF3-208ENST00000427118 DZIP1LQ8IYY4 767 aaKnown RBP20.16■□□□□ 0.82
AFF3-208ENST00000427118 MPNDQ8N594 471 aa20.16■□□□□ 0.82
AFF3-208ENST00000427118 RTFDC1Q9BY42 306 aaPredicted RBP20.16■□□□□ 0.82
AFF3-208ENST00000427118 CHMP4BQ9H444 224 aaKnown RBP20.16■□□□□ 0.82
AFF3-208ENST00000427118 SPEF2Q9C093 1822 aa20.16■□□□□ 0.82
AFF3-208ENST00000427118 GRIPAP1Q4V328 841 aa20.15■□□□□ 0.82
AFF3-208ENST00000427118 LINS1Q8NG48 757 aa20.15■□□□□ 0.82
AFF3-208ENST00000427118 ARHGAP45Q92619 1136 aa20.15■□□□□ 0.82
AFF3-208ENST00000427118 CDHR2Q9BYE9 1310 aa20.15■□□□□ 0.82
AFF3-208ENST00000427118 LTBP1Q14766 1721 aa20.15■□□□□ 0.82
AFF3-208ENST00000427118 SCN4AP35499 1836 aa20.14■□□□□ 0.81
AFF3-208ENST00000427118 ATF7IPQ6VMQ6 1270 aa20.14■□□□□ 0.81
AFF3-208ENST00000427118 UBE3BQ7Z3V4 1068 aa20.14■□□□□ 0.81
AFF3-208ENST00000427118 JDP2Q8WYK2 163 aa20.14■□□□□ 0.81
AFF3-208ENST00000427118 L3MBTL3Q96JM7 780 aaPredicted RBP20.14■□□□□ 0.81
AFF3-208ENST00000427118 TMX4Q9H1E5 349 aaPredicted RBP20.14■□□□□ 0.81
AFF3-208ENST00000427118 H7C1W4 665 aa20.13■□□□□ 0.81
AFF3-208ENST00000427118 RPS8P62241 208 aaKnown RBP20.13■□□□□ 0.81
AFF3-208ENST00000427118 GPSM2P81274 684 aa20.13■□□□□ 0.81
AFF3-208ENST00000427118 GCKRQ14397 625 aa20.13■□□□□ 0.81
AFF3-208ENST00000427118 PANK1Q8TE04 598 aa20.13■□□□□ 0.81
AFF3-208ENST00000427118 TSHZ2Q9NRE2 1034 aa20.13■□□□□ 0.81
AFF3-208ENST00000427118 NOB1Q9ULX3 412 aaKnown RBP20.13■□□□□ 0.81
AFF3-208ENST00000427118 HSP90B1P14625 803 aaKnown RBP20.12■□□□□ 0.81
AFF3-208ENST00000427118 CASP7P55210 303 aa20.12■□□□□ 0.81
AFF3-208ENST00000427118 CTSWP56202 376 aa20.12■□□□□ 0.81
AFF3-208ENST00000427118 HTRA3P83110 453 aa20.12■□□□□ 0.81
AFF3-208ENST00000427118 FSTL1Q12841 308 aa20.12■□□□□ 0.81
AFF3-208ENST00000427118 CCDC152Q4G0S7 254 aa20.12■□□□□ 0.81
AFF3-208ENST00000427118 BEND3Q5T5X7 828 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms