RNA–Protein interactions for RNA: ENST00000420101.6

SEMA4D-204, Transcript of semaphorin 4D, humanhuman

TSL 1 (best) BASIC

Gene SEMA4D, Length 1,837 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-204ENST00000420101 CAVIN1Q6NZI2 390 aaKnown RBP17.77■□□□□ 0.43
SEMA4D-204ENST00000420101 GIGYF2Q6Y7W6 1299 aaKnown RBP17.77■□□□□ 0.43
SEMA4D-204ENST00000420101 TBC1D9Q6ZT07 1266 aa17.77■□□□□ 0.43
SEMA4D-204ENST00000420101 ERC1Q8IUD2 1116 aa17.77■□□□□ 0.43
SEMA4D-204ENST00000420101 H7C1W4 665 aa17.76■□□□□ 0.43
SEMA4D-204ENST00000420101 GPTP24298 496 aa17.76■□□□□ 0.43
SEMA4D-204ENST00000420101 MCTP1Q6DN14 999 aa17.76■□□□□ 0.43
SEMA4D-204ENST00000420101 SIL1Q9H173 461 aa17.76■□□□□ 0.43
SEMA4D-204ENST00000420101 AFDNP55196 1824 aaKnown RBP17.76■□□□□ 0.43
SEMA4D-204ENST00000420101 MX1P20591 662 aa17.75■□□□□ 0.43
SEMA4D-204ENST00000420101 PDE1AP54750 535 aa17.75■□□□□ 0.43
SEMA4D-204ENST00000420101 HLFQ16534 295 aa17.75■□□□□ 0.43
SEMA4D-204ENST00000420101 NUTM1Q86Y26 1132 aa17.75■□□□□ 0.43
SEMA4D-204ENST00000420101 ISCA1Q9BUE6 129 aa17.75■□□□□ 0.43
SEMA4D-204ENST00000420101 GSPT1P15170 499 aaKnown RBP17.75■□□□□ 0.43
SEMA4D-204ENST00000420101 UVSSAQ2YD98 709 aa17.75■□□□□ 0.43
SEMA4D-204ENST00000420101 INTS5Q6P9B9 1019 aaKnown RBP17.75■□□□□ 0.43
SEMA4D-204ENST00000420101 SYAP1Q96A49 352 aaPredicted RBP17.75■□□□□ 0.43
SEMA4D-204ENST00000420101 TAF3Q5VWG9 929 aa17.74■□□□□ 0.43
SEMA4D-204ENST00000420101 TSHZ3Q63HK5 1081 aa17.74■□□□□ 0.43
SEMA4D-204ENST00000420101 LMBR1LQ6UX01 489 aa17.74■□□□□ 0.43
SEMA4D-204ENST00000420101 PTF1AQ7RTS3 328 aa17.74■□□□□ 0.43
SEMA4D-204ENST00000420101 CLASRPQ8N2M8 674 aaKnown RBP17.74■□□□□ 0.43
SEMA4D-204ENST00000420101 FAM184AQ8NB25 1140 aa17.74■□□□□ 0.43
SEMA4D-204ENST00000420101 THSD7AQ9UPZ6 1657 aa17.74■□□□□ 0.43
SEMA4D-204ENST00000420101 TJP1Q07157 1748 aa17.73■□□□□ 0.43
SEMA4D-204ENST00000420101 ST18O60284 1047 aa17.73■□□□□ 0.43
SEMA4D-204ENST00000420101 LETM1O95202 739 aaPredicted RBP17.73■□□□□ 0.43
SEMA4D-204ENST00000420101 KCNQ4P56696 695 aa17.73■□□□□ 0.43
SEMA4D-204ENST00000420101 KLHDC4Q8TBB5 520 aa17.73■□□□□ 0.43
SEMA4D-204ENST00000420101 PHF14O94880 888 aa17.72■□□□□ 0.43
SEMA4D-204ENST00000420101 CD2BP2O95400 341 aaKnown RBP17.72■□□□□ 0.43
SEMA4D-204ENST00000420101 CASP7P55210 303 aa17.72■□□□□ 0.43
SEMA4D-204ENST00000420101 CASC1Q6TDU7 716 aa17.72■□□□□ 0.43
SEMA4D-204ENST00000420101 NUP188Q5SRE5 1749 aa17.72■□□□□ 0.43
SEMA4D-204ENST00000420101 ERVV-1B6SEH8 477 aa17.72■□□□□ 0.43
SEMA4D-204ENST00000420101 ONECUT3O60422 494 aaPredicted RBP17.72■□□□□ 0.43
SEMA4D-204ENST00000420101 EIF5P55010 431 aaKnown RBP17.72■□□□□ 0.43
SEMA4D-204ENST00000420101 FAM89AQ96GI7 184 aa17.72■□□□□ 0.43
SEMA4D-204ENST00000420101 TRIM6-TRIM34B2RNG4 842 aa17.71■□□□□ 0.43
SEMA4D-204ENST00000420101 IFIT2P09913 472 aaKnown RBP17.71■□□□□ 0.43
SEMA4D-204ENST00000420101 TRIM28Q13263 835 aaKnown RBP17.71■□□□□ 0.43
SEMA4D-204ENST00000420101 RABL6Q3YEC7 729 aaPredicted RBP17.71■□□□□ 0.43
SEMA4D-204ENST00000420101 OSBPL3Q9H4L5 887 aa17.71■□□□□ 0.43
SEMA4D-204ENST00000420101 SDSP20132 328 aa17.7■□□□□ 0.42
SEMA4D-204ENST00000420101 ZBTB38Q8NAP3 1195 aaPredicted RBP17.7■□□□□ 0.42
SEMA4D-204ENST00000420101 LINC00116Q8NCU8 138 aa17.7■□□□□ 0.42
SEMA4D-204ENST00000420101 CCNL1Q9UK58 526 aaPredicted RBP17.7■□□□□ 0.42
SEMA4D-204ENST00000420101 COL15A1P39059 1388 aa17.7■□□□□ 0.42
SEMA4D-204ENST00000420101 PCCAP05165 728 aaPredicted RBP17.7■□□□□ 0.42
SEMA4D-204ENST00000420101 FOXO4P98177 505 aa17.7■□□□□ 0.42
SEMA4D-204ENST00000420101 NLRP10Q86W26 655 aa17.7■□□□□ 0.42
SEMA4D-204ENST00000420101 RILPL2Q969X0 211 aa17.7■□□□□ 0.42
SEMA4D-204ENST00000420101 TRMT112Q9UI30 125 aaKnown RBP17.7■□□□□ 0.42
SEMA4D-204ENST00000420101 ZSCAN20P17040 1043 aaPredicted RBP17.69■□□□□ 0.42
SEMA4D-204ENST00000420101 MCM2P49736 904 aa17.69■□□□□ 0.42
SEMA4D-204ENST00000420101 AACSQ86V21 672 aa17.69■□□□□ 0.42
SEMA4D-204ENST00000420101 GPATCH3Q96I76 525 aa17.69■□□□□ 0.42
SEMA4D-204ENST00000420101 FAM177BA6PVY3 158 aa17.68■□□□□ 0.42
SEMA4D-204ENST00000420101 ZNF772Q68DY9 489 aaPredicted RBP17.68■□□□□ 0.42
SEMA4D-204ENST00000420101 PTPN12Q05209 780 aaKnown RBP17.68■□□□□ 0.42
SEMA4D-204ENST00000420101 KRT27Q7Z3Y8 459 aa17.68■□□□□ 0.42
SEMA4D-204ENST00000420101 PIBF1Q8WXW3 757 aa17.68■□□□□ 0.42
SEMA4D-204ENST00000420101 CCDC85AQ96PX6 553 aaPredicted RBP17.68■□□□□ 0.42
SEMA4D-204ENST00000420101 COPRSQ9NQ92 184 aa17.68■□□□□ 0.42
SEMA4D-204ENST00000420101 STAP2Q9UGK3 403 aa17.68■□□□□ 0.42
SEMA4D-204ENST00000420101 SALL3Q9BXA9 1300 aa17.67■□□□□ 0.42
SEMA4D-204ENST00000420101 SASH1O94885 1247 aa17.67■□□□□ 0.42
SEMA4D-204ENST00000420101 CCDC57Q2TAC2 916 aa17.67■□□□□ 0.42
SEMA4D-204ENST00000420101 TAF7LQ5H9L4 462 aa17.67■□□□□ 0.42
SEMA4D-204ENST00000420101 ZNF652Q9Y2D9 606 aa17.67■□□□□ 0.42
SEMA4D-204ENST00000420101 AOX1Q06278 1338 aa17.67■□□□□ 0.42
SEMA4D-204ENST00000420101 AK9Q5TCS8 1911 aa17.66■□□□□ 0.42
SEMA4D-204ENST00000420101 PRPF40AO75400 957 aaKnown RBP17.66■□□□□ 0.42
SEMA4D-204ENST00000420101 TPM3P06753 285 aa17.66■□□□□ 0.42
SEMA4D-204ENST00000420101 RFX5P48382 616 aaPredicted RBP17.66■□□□□ 0.42
SEMA4D-204ENST00000420101 GPT2Q8TD30 523 aa17.66■□□□□ 0.42
SEMA4D-204ENST00000420101 FOXD4L1Q9NU39 408 aa17.66■□□□□ 0.42
SEMA4D-204ENST00000420101 ERC2O15083 957 aa17.65■□□□□ 0.42
SEMA4D-204ENST00000420101 FAM196AQ6ZSG2 479 aa17.65■□□□□ 0.42
SEMA4D-204ENST00000420101 USP26Q9BXU7 913 aa17.65■□□□□ 0.42
SEMA4D-204ENST00000420101 CCDC8Q9H0W5 538 aaPredicted RBP17.65■□□□□ 0.42
SEMA4D-204ENST00000420101 TSPY26PQ9H489 355 aa17.65■□□□□ 0.42
SEMA4D-204ENST00000420101 IRS4O14654 1257 aaPredicted RBP17.65■□□□□ 0.42
SEMA4D-204ENST00000420101 CAMTA2O94983 1202 aa17.65■□□□□ 0.42
SEMA4D-204ENST00000420101 MAP4K4O95819 1239 aaPredicted RBP17.65■□□□□ 0.42
SEMA4D-204ENST00000420101 PTMAP06454 111 aaKnown RBP17.65■□□□□ 0.42
SEMA4D-204ENST00000420101 ZNF34Q8IZ26 560 aa17.65■□□□□ 0.42
SEMA4D-204ENST00000420101 BCL11BQ9C0K0 894 aaPredicted RBP17.65■□□□□ 0.42
SEMA4D-204ENST00000420101 NIP7Q9Y221 180 aaKnown RBP eCLIP17.65■□□□□ 0.42
SEMA4D-204ENST00000420101 GNPATO15228 680 aa17.64■□□□□ 0.41
SEMA4D-204ENST00000420101 RBM6P78332 1123 aaKnown RBP17.64■□□□□ 0.41
SEMA4D-204ENST00000420101 TFCP2Q12800 502 aa17.64■□□□□ 0.41
SEMA4D-204ENST00000420101 SYNE4Q8N205 404 aa17.64■□□□□ 0.41
SEMA4D-204ENST00000420101 CNTNAP4Q9C0A0 1308 aa17.64■□□□□ 0.41
SEMA4D-204ENST00000420101 NHSQ6T4R5 1651 aa17.64■□□□□ 0.41
SEMA4D-204ENST00000420101 TTC41PQ6P2S7 1318 aa17.63■□□□□ 0.41
SEMA4D-204ENST00000420101 CDHR2Q9BYE9 1310 aa17.63■□□□□ 0.41
SEMA4D-204ENST00000420101 REC8O95072 547 aa17.63■□□□□ 0.41
SEMA4D-204ENST00000420101 ZNF594Q96JF6 807 aaPredicted RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms