RNA–Protein interactions for RNA: ENST00000414664.5

CPNE1-207, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,070 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-207ENST00000414664 SLC4A10Q6U841 1118 aa32.11■■■□□ 2.73
CPNE1-207ENST00000414664 CCDC152Q4G0S7 254 aa32.1■■■□□ 2.73
CPNE1-207ENST00000414664 UBE3BQ7Z3V4 1068 aa32.1■■■□□ 2.73
CPNE1-207ENST00000414664 TMC4Q7Z404 712 aa32.1■■■□□ 2.73
CPNE1-207ENST00000414664 ALDH1L1O75891 902 aa32.09■■■□□ 2.73
CPNE1-207ENST00000414664 FKBP4Q02790 459 aaKnown RBP eCLIP32.09■■■□□ 2.73
CPNE1-207ENST00000414664 ATP6V0A2Q9Y487 856 aa32.09■■■□□ 2.73
CPNE1-207ENST00000414664 OLFM4Q6UX06 510 aa32.08■■■□□ 2.73
CPNE1-207ENST00000414664 SRCIN1Q9C0H9 1055 aa32.08■■■□□ 2.73
CPNE1-207ENST00000414664 ZC3H4Q9UPT8 1303 aaKnown RBP32.07■■■□□ 2.72
CPNE1-207ENST00000414664 BRPF1P55201 1214 aaPredicted RBP32.07■■■□□ 2.72
CPNE1-207ENST00000414664 RARSP54136 660 aaKnown RBP32.06■■■□□ 2.72
CPNE1-207ENST00000414664 SP8Q8IXZ3 490 aa32.06■■■□□ 2.72
CPNE1-207ENST00000414664 PRELPP51888 382 aa32.05■■■□□ 2.72
CPNE1-207ENST00000414664 PSMD1Q99460 953 aa32.05■■■□□ 2.72
CPNE1-207ENST00000414664 CCDC88AQ3V6T2 1871 aa32.04■■■□□ 2.72
CPNE1-207ENST00000414664 CTSWP56202 376 aa32.04■■■□□ 2.72
CPNE1-207ENST00000414664 PLA2G12BQ9BX93 195 aa32.04■■■□□ 2.72
CPNE1-207ENST00000414664 CASP7P55210 303 aa32.03■■■□□ 2.72
CPNE1-207ENST00000414664 C9orf78Q9NZ63 289 aaPredicted RBP32.03■■■□□ 2.72
CPNE1-207ENST00000414664 RPS8P62241 208 aaKnown RBP32.02■■■□□ 2.72
CPNE1-207ENST00000414664 CELF1Q92879 486 aaKnown RBP32.02■■■□□ 2.72
CPNE1-207ENST00000414664 GPBP1L1Q9HC44 474 aaPredicted RBP32.02■■■□□ 2.72
CPNE1-207ENST00000414664 NOB1Q9ULX3 412 aaKnown RBP32.02■■■□□ 2.72
CPNE1-207ENST00000414664 GRM8O00222 908 aa32.01■■■□□ 2.71
CPNE1-207ENST00000414664 TTLL11Q8NHH1 800 aa32.01■■■□□ 2.71
CPNE1-207ENST00000414664 SNED1Q8TER0 1413 aa32■■■□□ 2.71
CPNE1-207ENST00000414664 ZNF526Q8TF50 670 aaPredicted RBP32■■■□□ 2.71
CPNE1-207ENST00000414664 CCDC85AQ96PX6 553 aaPredicted RBP32■■■□□ 2.71
CPNE1-207ENST00000414664 API5Q9BZZ5 524 aaKnown RBP32■■■□□ 2.71
CPNE1-207ENST00000414664 ZNF277Q9NRM2 450 aaPredicted RBP32■■■□□ 2.71
CPNE1-207ENST00000414664 KIF16BQ96L93 1317 aa32■■■□□ 2.71
CPNE1-207ENST00000414664 TAF1P21675 1872 aa31.99■■■□□ 2.71
CPNE1-207ENST00000414664 MYH3P11055 1940 aa31.99■■■□□ 2.71
CPNE1-207ENST00000414664 SUPT20HQ8NEM7 779 aa31.99■■■□□ 2.71
CPNE1-207ENST00000414664 SEC31BQ9NQW1 1179 aa31.99■■■□□ 2.71
CPNE1-207ENST00000414664 DICER1Q9UPY3 1922 aaKnown RBP31.98■■■□□ 2.71
CPNE1-207ENST00000414664 MPNDQ8N594 471 aa31.98■■■□□ 2.71
CPNE1-207ENST00000414664 CDC5LQ99459 802 aaKnown RBP31.98■■■□□ 2.71
CPNE1-207ENST00000414664 IARSP41252 1262 aaKnown RBP31.97■■■□□ 2.71
CPNE1-207ENST00000414664 DPP8Q6V1X1 898 aaPredicted RBP31.97■■■□□ 2.71
CPNE1-207ENST00000414664 ANKRD18AQ8IVF6 992 aa31.97■■■□□ 2.71
CPNE1-207ENST00000414664 RTL9Q8NET4 1388 aa31.96■■■□□ 2.71
CPNE1-207ENST00000414664 ARHGAP45Q92619 1136 aa31.96■■■□□ 2.71
CPNE1-207ENST00000414664 KDM2BQ8NHM5 1336 aa31.96■■■□□ 2.71
CPNE1-207ENST00000414664 IPO8O15397 1037 aaKnown RBP31.95■■■□□ 2.71
CPNE1-207ENST00000414664 CSF1RP07333 972 aa31.95■■■□□ 2.71
CPNE1-207ENST00000414664 VPS33BQ9H267 617 aa31.95■■■□□ 2.71
CPNE1-207ENST00000414664 GREM2Q9H772 168 aa31.95■■■□□ 2.71
CPNE1-207ENST00000414664 DPY19L2Q6NUT2 758 aa31.94■■■□□ 2.7
CPNE1-207ENST00000414664 RTFDC1Q9BY42 306 aaPredicted RBP31.94■■■□□ 2.7
CPNE1-207ENST00000414664 TIAM2Q8IVF5 1701 aa31.94■■■□□ 2.7
CPNE1-207ENST00000414664 CCT4P50991 539 aaKnown RBP31.93■■■□□ 2.7
CPNE1-207ENST00000414664 SLC51AQ86UW1 340 aa31.93■■■□□ 2.7
CPNE1-207ENST00000414664 JDP2Q8WYK2 163 aa31.92■■■□□ 2.7
CPNE1-207ENST00000414664 GLTPD2A6NH11 291 aa31.91■■■□□ 2.7
CPNE1-207ENST00000414664 NSFL1CQ9UNZ2 370 aaKnown RBP31.91■■■□□ 2.7
CPNE1-207ENST00000414664 UTYO14607 1347 aa31.91■■■□□ 2.7
CPNE1-207ENST00000414664 LRRC37AA6NMS7 1700 aa31.9■■■□□ 2.7
CPNE1-207ENST00000414664 BCAR3O75815 825 aa31.9■■■□□ 2.7
CPNE1-207ENST00000414664 FOXO4P98177 505 aa31.9■■■□□ 2.7
CPNE1-207ENST00000414664 LARGE2Q8N3Y3 721 aa31.9■■■□□ 2.7
CPNE1-207ENST00000414664 ITGA6P23229 1130 aa31.89■■■□□ 2.7
CPNE1-207ENST00000414664 IGHMBP2P38935 993 aaKnown RBP31.89■■■□□ 2.7
CPNE1-207ENST00000414664 PPIP5K2O43314 1243 aa31.88■■■□□ 2.69
CPNE1-207ENST00000414664 NBPF7P0C2Y1 421 aaPredicted RBP31.88■■■□□ 2.69
CPNE1-207ENST00000414664 FAM161AQ3B820 660 aa31.88■■■□□ 2.69
CPNE1-207ENST00000414664 FRAT1Q92837 279 aaPredicted RBP31.88■■■□□ 2.69
CPNE1-207ENST00000414664 BSDC1Q9NW68 430 aaPredicted RBP31.88■■■□□ 2.69
CPNE1-207ENST00000414664 CHMP3Q9Y3E7 222 aa31.88■■■□□ 2.69
CPNE1-207ENST00000414664 COL4A1P02462 1669 aa31.87■■■□□ 2.69
CPNE1-207ENST00000414664 ANKRD18BA2A2Z9 1011 aa31.87■■■□□ 2.69
CPNE1-207ENST00000414664 GPSM2P81274 684 aa31.87■■■□□ 2.69
CPNE1-207ENST00000414664 LMBR1LQ6UX01 489 aa31.87■■■□□ 2.69
CPNE1-207ENST00000414664 IFIT5Q13325 482 aaKnown RBP31.86■■■□□ 2.69
CPNE1-207ENST00000414664 USP44Q9H0E7 712 aa31.86■■■□□ 2.69
CPNE1-207ENST00000414664 ANKIB1Q9P2G1 1089 aa31.86■■■□□ 2.69
CPNE1-207ENST00000414664 NIM1KQ8IY84 436 aa31.85■■■□□ 2.69
CPNE1-207ENST00000414664 SUCLG2Q96I99 432 aa31.85■■■□□ 2.69
CPNE1-207ENST00000414664 MPHOSPH8Q99549 860 aa31.85■■■□□ 2.69
CPNE1-207ENST00000414664 PODXL2Q9NZ53 605 aa31.85■■■□□ 2.69
CPNE1-207ENST00000414664 C6orf229H3BNL8 230 aa31.84■■■□□ 2.69
CPNE1-207ENST00000414664 FZD9O00144 591 aa31.84■■■□□ 2.69
CPNE1-207ENST00000414664 AOC3Q16853 763 aa31.84■■■□□ 2.69
CPNE1-207ENST00000414664 EPHA10Q5JZY3 1008 aa31.84■■■□□ 2.69
CPNE1-207ENST00000414664 ATF7IPQ6VMQ6 1270 aa31.84■■■□□ 2.69
CPNE1-207ENST00000414664 EYA3Q99504 573 aa31.84■■■□□ 2.69
CPNE1-207ENST00000414664 KIAA2012Q0VF49 1180 aa31.83■■■□□ 2.69
CPNE1-207ENST00000414664 CCDC57Q2TAC2 916 aa31.83■■■□□ 2.69
CPNE1-207ENST00000414664 ZKSCAN2Q63HK3 967 aa31.83■■■□□ 2.69
CPNE1-207ENST00000414664 NMRK2Q9NPI5 230 aa31.83■■■□□ 2.69
CPNE1-207ENST00000414664 EIF6P56537 245 aaKnown RBP31.82■■■□□ 2.68
CPNE1-207ENST00000414664 WASHC4Q2M389 1173 aa31.82■■■□□ 2.68
CPNE1-207ENST00000414664 HDAC5Q9UQL6 1122 aa31.82■■■□□ 2.68
CPNE1-207ENST00000414664 XDHP47989 1333 aa31.81■■■□□ 2.68
CPNE1-207ENST00000414664 INTS3Q68E01 1043 aaKnown RBP31.81■■■□□ 2.68
CPNE1-207ENST00000414664 TBC1D16Q8TBP0 767 aa31.81■■■□□ 2.68
CPNE1-207ENST00000414664 RRAGCQ9HB90 399 aa31.81■■■□□ 2.68
CPNE1-207ENST00000414664 POLLQ9UGP5 575 aa31.81■■■□□ 2.68
CPNE1-207ENST00000414664 GGA1Q9UJY5 639 aa31.81■■■□□ 2.68
Retrieved 100 of 20,778 RNA–protein pairs in 125.6 ms