RNA–Protein interactions for RNA: ENST00000409076.6

SNX13-201, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,818 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-201ENST00000409076 EVI5LQ96CN4 794 aa9.79□□□□□ -0.84
SNX13-201ENST00000409076 ZC3H13Q5T200 1668 aaKnown RBP9.78□□□□□ -0.84
SNX13-201ENST00000409076 SKILP12757 684 aa9.78□□□□□ -0.84
SNX13-201ENST00000409076 LEO1Q8WVC0 666 aaPredicted RBP9.78□□□□□ -0.84
SNX13-201ENST00000409076 INTS4Q96HW7 963 aaKnown RBP9.78□□□□□ -0.84
SNX13-201ENST00000409076 PPP6R1Q9UPN7 881 aa9.78□□□□□ -0.84
SNX13-201ENST00000409076 MRVI1Q9Y6F6 885 aa9.78□□□□□ -0.84
SNX13-201ENST00000409076 MAP3K5Q99683 1374 aa9.78□□□□□ -0.84
SNX13-201ENST00000409076 IDH1O75874 414 aaKnown RBP9.78□□□□□ -0.84
SNX13-201ENST00000409076 SASH1O94885 1247 aa9.78□□□□□ -0.84
SNX13-201ENST00000409076 HMGN5P82970 282 aaKnown RBP9.78□□□□□ -0.84
SNX13-201ENST00000409076 CCDC144BQ3MJ40 725 aa9.78□□□□□ -0.84
SNX13-201ENST00000409076 KLHL10Q6JEL2 608 aa9.78□□□□□ -0.84
SNX13-201ENST00000409076 CMTR1Q8N1G2 835 aaKnown RBP9.78□□□□□ -0.84
SNX13-201ENST00000409076 ZNF710Q8N1W2 664 aa9.78□□□□□ -0.84
SNX13-201ENST00000409076 ZMYM3Q14202 1370 aa9.78□□□□□ -0.84
SNX13-201ENST00000409076 ANAPC15P60006 121 aa9.78□□□□□ -0.84
SNX13-201ENST00000409076 CACTINQ8WUQ7 758 aaKnown RBP9.78□□□□□ -0.84
SNX13-201ENST00000409076 EPC1Q9H2F5 836 aa9.78□□□□□ -0.84
SNX13-201ENST00000409076 ELF2Q15723 593 aa9.77□□□□□ -0.84
SNX13-201ENST00000409076 MICU3Q86XE3 530 aa9.77□□□□□ -0.84
SNX13-201ENST00000409076 PUS7Q96PZ0 661 aaKnown RBP9.77□□□□□ -0.84
SNX13-201ENST00000409076 CCDC94Q9BW85 323 aaPredicted RBP9.77□□□□□ -0.84
SNX13-201ENST00000409076 MED14O60244 1454 aa9.77□□□□□ -0.85
SNX13-201ENST00000409076 hCG_1642624A0A1W2PR95 340 aa9.77□□□□□ -0.85
SNX13-201ENST00000409076 PTPN14Q15678 1187 aa9.77□□□□□ -0.85
SNX13-201ENST00000409076 SYNE3Q6ZMZ3 975 aa9.77□□□□□ -0.85
SNX13-201ENST00000409076 MYO5BQ9ULV0 1848 aa9.77□□□□□ -0.85
SNX13-201ENST00000409076 RGS12O14924 1447 aa9.77□□□□□ -0.85
SNX13-201ENST00000409076 FAM170AA1A519 330 aa9.77□□□□□ -0.85
SNX13-201ENST00000409076 PTPDC1A2A3K4 754 aa9.77□□□□□ -0.85
SNX13-201ENST00000409076 SERPINC1P01008 464 aa9.77□□□□□ -0.85
SNX13-201ENST00000409076 CEP135Q66GS9 1140 aa9.77□□□□□ -0.85
SNX13-201ENST00000409076 AIFM3Q96NN9 605 aa9.77□□□□□ -0.85
SNX13-201ENST00000409076 ZKSCAN3Q9BRR0 538 aa9.77□□□□□ -0.85
SNX13-201ENST00000409076 RIMS1Q86UR5 1692 aaKnown RBP9.76□□□□□ -0.85
SNX13-201ENST00000409076 CCDC69A6NI79 296 aa9.76□□□□□ -0.85
SNX13-201ENST00000409076 PDCP20941 246 aa9.76□□□□□ -0.85
SNX13-201ENST00000409076 NEXMIFQ5QGS0 1516 aa9.76□□□□□ -0.85
SNX13-201ENST00000409076 MROH1Q8NDA8 1641 aa9.76□□□□□ -0.85
SNX13-201ENST00000409076 SYT10Q6XYQ8 523 aa9.76□□□□□ -0.85
SNX13-201ENST00000409076 RALYLQ86SE5 291 aaKnown RBP9.76□□□□□ -0.85
SNX13-201ENST00000409076 NUP133Q8WUM0 1156 aa9.76□□□□□ -0.85
SNX13-201ENST00000409076 ZSCAN31Q96LW9 406 aaPredicted RBP9.76□□□□□ -0.85
SNX13-201ENST00000409076 USP28Q96RU2 1077 aa9.76□□□□□ -0.85
SNX13-201ENST00000409076 MAP7D2Q96T17 732 aa9.76□□□□□ -0.85
SNX13-201ENST00000409076 HINFPQ9BQA5 517 aa9.76□□□□□ -0.85
SNX13-201ENST00000409076 INCENPQ9NQS7 918 aa9.76□□□□□ -0.85
SNX13-201ENST00000409076 ALKQ9UM73 1620 aa9.76□□□□□ -0.85
SNX13-201ENST00000409076 GOLGA8BA8MQT2 603 aa9.76□□□□□ -0.85
SNX13-201ENST00000409076 SNAP23O00161 211 aa9.76□□□□□ -0.85
SNX13-201ENST00000409076 URI1O94763 535 aaPredicted RBP9.76□□□□□ -0.85
SNX13-201ENST00000409076 IFIT1P09914 478 aaKnown RBP9.76□□□□□ -0.85
SNX13-201ENST00000409076 ST3GAL1Q11201 340 aa9.76□□□□□ -0.85
SNX13-201ENST00000409076 CFAP100Q494V2 611 aa9.76□□□□□ -0.85
SNX13-201ENST00000409076 KSR2Q6VAB6 950 aa9.76□□□□□ -0.85
SNX13-201ENST00000409076 DHX37Q8IY37 1157 aaKnown RBP9.76□□□□□ -0.85
SNX13-201ENST00000409076 IFNKQ9P0W0 207 aa9.76□□□□□ -0.85
SNX13-201ENST00000409076 LETM1O95202 739 aaPredicted RBP9.75□□□□□ -0.85
SNX13-201ENST00000409076 PGBD1Q96JS3 809 aa9.75□□□□□ -0.85
SNX13-201ENST00000409076 OSBPL3Q9H4L5 887 aa9.75□□□□□ -0.85
SNX13-201ENST00000409076 A1BGP04217 495 aa9.75□□□□□ -0.85
SNX13-201ENST00000409076 RPS6KB1P23443 525 aa9.75□□□□□ -0.85
SNX13-201ENST00000409076 CABP4P57796 275 aa9.75□□□□□ -0.85
SNX13-201ENST00000409076 ZNF496Q96IT1 587 aaPredicted RBP9.75□□□□□ -0.85
SNX13-201ENST00000409076 SH2B1Q9NRF2 756 aaPredicted RBP9.75□□□□□ -0.85
SNX13-201ENST00000409076 HTATSF1O43719 755 aaKnown RBP9.75□□□□□ -0.85
SNX13-201ENST00000409076 PHKBQ93100 1093 aa9.75□□□□□ -0.85
SNX13-201ENST00000409076 TTC14Q96N46 770 aa9.75□□□□□ -0.85
SNX13-201ENST00000409076 PUS3Q9BZE2 481 aaKnown RBP9.75□□□□□ -0.85
SNX13-201ENST00000409076 DBNLQ9UJU6 430 aaKnown RBP9.75□□□□□ -0.85
SNX13-201ENST00000409076 ZNF215Q9UL58 517 aaPredicted RBP9.75□□□□□ -0.85
SNX13-201ENST00000409076 KLF18A0A0U1RQI7 1052 aa9.74□□□□□ -0.85
SNX13-201ENST00000409076 ZNF75DP51815 510 aa9.74□□□□□ -0.85
SNX13-201ENST00000409076 LRRC24Q50LG9 513 aa9.74□□□□□ -0.85
SNX13-201ENST00000409076 TTC39AQ5SRH9 613 aa9.74□□□□□ -0.85
SNX13-201ENST00000409076 ZSCAN25Q6NSZ9 544 aa9.74□□□□□ -0.85
SNX13-201ENST00000409076 ANKRD13DQ6ZTN6 518 aa9.74□□□□□ -0.85
SNX13-201ENST00000409076 CCDC34Q96HJ3 373 aa9.74□□□□□ -0.85
SNX13-201ENST00000409076 SCAND2PQ9GZW5 306 aaPredicted RBP9.74□□□□□ -0.85
SNX13-201ENST00000409076 TNRQ92752 1358 aa9.74□□□□□ -0.85
SNX13-201ENST00000409076 ARHGEF28Q8N1W1 1705 aaKnown RBP9.74□□□□□ -0.85
SNX13-201ENST00000409076 INO80Q9ULG1 1556 aaPredicted RBP9.74□□□□□ -0.85
SNX13-201ENST00000409076 RNMTO43148 476 aaKnown RBP9.74□□□□□ -0.85
SNX13-201ENST00000409076 CYP21A2P08686 494 aa9.74□□□□□ -0.85
SNX13-201ENST00000409076 PDE4CQ08493 712 aa9.74□□□□□ -0.85
SNX13-201ENST00000409076 SCRN1Q12765 414 aa9.74□□□□□ -0.85
SNX13-201ENST00000409076 ZNF827Q17R98 1081 aa9.74□□□□□ -0.85
SNX13-201ENST00000409076 MNS1Q8NEH6 495 aa9.74□□□□□ -0.85
SNX13-201ENST00000409076 DNAI1Q9UI46 699 aa9.74□□□□□ -0.85
SNX13-201ENST00000409076 LONRF3Q496Y0 759 aa9.74□□□□□ -0.85
SNX13-201ENST00000409076 ERC1Q8IUD2 1116 aa9.74□□□□□ -0.85
SNX13-201ENST00000409076 SYNE4Q8N205 404 aa9.74□□□□□ -0.85
SNX13-201ENST00000409076 STAMQ92783 540 aa9.74□□□□□ -0.85
SNX13-201ENST00000409076 PIK3C2BO00750 1634 aa9.73□□□□□ -0.85
SNX13-201ENST00000409076 KARSQ15046 597 aaKnown RBP9.73□□□□□ -0.85
SNX13-201ENST00000409076 HS1BP3Q53T59 392 aa9.73□□□□□ -0.85
SNX13-201ENST00000409076 TEX35Q5T0J7 233 aa9.73□□□□□ -0.85
SNX13-201ENST00000409076 PROSER2Q86WR7 435 aaPredicted RBP9.73□□□□□ -0.85
SNX13-201ENST00000409076 KIAA1524Q8TCG1 905 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms