RNA–Protein interactions for RNA: ENST00000395194.1

COL11A2-204, Transcript of collagen type XI alpha 2 chain, humanhuman

TSL 1 (best) BASIC

Gene COL11A2, Length 1,194 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-204ENST00000395194 CFAP44Q96MT7 982 aa25.05■■□□□ 1.6
COL11A2-204ENST00000395194 DBF4Q9UBU7 674 aaPredicted RBP25.05■■□□□ 1.6
COL11A2-204ENST00000395194 HOXB7P09629 217 aa25.04■■□□□ 1.6
COL11A2-204ENST00000395194 SUPT20HQ8NEM7 779 aa25.04■■□□□ 1.6
COL11A2-204ENST00000395194 FAM89AQ96GI7 184 aa25.04■■□□□ 1.6
COL11A2-204ENST00000395194 COL4A1P02462 1669 aa25.04■■□□□ 1.6
COL11A2-204ENST00000395194 LRRC37AA6NMS7 1700 aa25.03■■□□□ 1.6
COL11A2-204ENST00000395194 DUOX1Q9NRD9 1551 aa25.03■■□□□ 1.6
COL11A2-204ENST00000395194 APAF1O14727 1248 aa25.03■■□□□ 1.6
COL11A2-204ENST00000395194 CXCL9Q07325 125 aa25.03■■□□□ 1.6
COL11A2-204ENST00000395194 RTFDC1Q9BY42 306 aaPredicted RBP25.03■■□□□ 1.6
COL11A2-204ENST00000395194 FOXN1O15353 648 aa25.02■■□□□ 1.6
COL11A2-204ENST00000395194 ISCA1Q9BUE6 129 aa25.02■■□□□ 1.6
COL11A2-204ENST00000395194 ZNRF3Q9ULT6 936 aa25.02■■□□□ 1.6
COL11A2-204ENST00000395194 ABT1Q9ULW3 272 aaKnown RBP25.02■■□□□ 1.6
COL11A2-204ENST00000395194 ELL2O00472 640 aaPredicted RBP25.01■■□□□ 1.59
COL11A2-204ENST00000395194 RAD17O75943 681 aa25■■□□□ 1.59
COL11A2-204ENST00000395194 GMPSP49915 693 aaPredicted RBP25■■□□□ 1.59
COL11A2-204ENST00000395194 KIAA2012Q0VF49 1180 aa25■■□□□ 1.59
COL11A2-204ENST00000395194 USP50Q70EL3 339 aaPredicted RBP25■■□□□ 1.59
COL11A2-204ENST00000395194 HYPKQ9NX55 129 aa25■■□□□ 1.59
COL11A2-204ENST00000395194 GPRC5DQ9NZD1 345 aa25■■□□□ 1.59
COL11A2-204ENST00000395194 TRAF5O00463 557 aa24.99■■□□□ 1.59
COL11A2-204ENST00000395194 DEFB115Q30KQ5 88 aa24.99■■□□□ 1.59
COL11A2-204ENST00000395194 CELF1Q92879 486 aaKnown RBP24.99■■□□□ 1.59
COL11A2-204ENST00000395194 VPS33BQ9H267 617 aa24.99■■□□□ 1.59
COL11A2-204ENST00000395194 RASSF10A6NK89 507 aa24.98■■□□□ 1.59
COL11A2-204ENST00000395194 CIAPIN1Q6FI81 312 aa24.98■■□□□ 1.59
COL11A2-204ENST00000395194 PHAXQ9H814 394 aaKnown RBP24.98■■□□□ 1.59
COL11A2-204ENST00000395194 ADARB2Q9NS39 739 aaKnown RBP24.98■■□□□ 1.59
COL11A2-204ENST00000395194 ZNF853P0CG23 659 aa24.97■■□□□ 1.59
COL11A2-204ENST00000395194 PAXIP1Q6ZW49 1069 aaPredicted RBP24.97■■□□□ 1.59
COL11A2-204ENST00000395194 AIDAQ96BJ3 306 aa24.97■■□□□ 1.59
COL11A2-204ENST00000395194 BCL2L13Q9BXK5 485 aa24.97■■□□□ 1.59
COL11A2-204ENST00000395194 RIC3Q7Z5B4 369 aa24.96■■□□□ 1.59
COL11A2-204ENST00000395194 IFT57Q9NWB7 429 aa24.96■■□□□ 1.59
COL11A2-204ENST00000395194 YDJCA8MPS7 323 aa24.95■■□□□ 1.58
COL11A2-204ENST00000395194 IRS4O14654 1257 aaPredicted RBP24.95■■□□□ 1.58
COL11A2-204ENST00000395194 GNAI1P63096 354 aa24.95■■□□□ 1.58
COL11A2-204ENST00000395194 GOLGA2Q08379 1002 aa24.95■■□□□ 1.58
COL11A2-204ENST00000395194 GRM1Q13255 1194 aa24.95■■□□□ 1.58
COL11A2-204ENST00000395194 NSFL1CQ9UNZ2 370 aaKnown RBP24.95■■□□□ 1.58
COL11A2-204ENST00000395194 WDR33Q9C0J8 1336 aaKnown RBP24.94■■□□□ 1.58
COL11A2-204ENST00000395194 SHTN1A0MZ66 631 aa24.94■■□□□ 1.58
COL11A2-204ENST00000395194 RIMBP2O15034 1052 aa24.94■■□□□ 1.58
COL11A2-204ENST00000395194 SF3B3Q15393 1217 aaKnown RBP24.94■■□□□ 1.58
COL11A2-204ENST00000395194 TMC4Q7Z404 712 aa24.94■■□□□ 1.58
COL11A2-204ENST00000395194 C8orf58Q8NAV2 365 aa24.93■■□□□ 1.58
COL11A2-204ENST00000395194 GPR101Q96P66 508 aaPredicted RBP24.93■■□□□ 1.58
COL11A2-204ENST00000395194 MYD88Q99836 296 aa24.93■■□□□ 1.58
COL11A2-204ENST00000395194 DBNDD1Q9H9R9 158 aa24.93■■□□□ 1.58
COL11A2-204ENST00000395194 C6orf229H3BNL8 230 aa24.92■■□□□ 1.58
COL11A2-204ENST00000395194 GPSM2P81274 684 aa24.92■■□□□ 1.58
COL11A2-204ENST00000395194 TNIP1Q15025 636 aa24.92■■□□□ 1.58
COL11A2-204ENST00000395194 TRPM4Q8TD43 1214 aa24.92■■□□□ 1.58
COL11A2-204ENST00000395194 JARID2Q92833 1246 aaPredicted RBP24.92■■□□□ 1.58
COL11A2-204ENST00000395194 GLIS2Q9BZE0 524 aaPredicted RBP24.92■■□□□ 1.58
COL11A2-204ENST00000395194 WBP1LQ9NX94 342 aa24.92■■□□□ 1.58
COL11A2-204ENST00000395194 CTCFP49711 727 aaPredicted RBP24.91■■□□□ 1.58
COL11A2-204ENST00000395194 CALD1Q05682 793 aaKnown RBP24.91■■□□□ 1.58
COL11A2-204ENST00000395194 WASHC4Q2M389 1173 aa24.91■■□□□ 1.58
COL11A2-204ENST00000395194 CST9Q5W186 159 aa24.91■■□□□ 1.58
COL11A2-204ENST00000395194 ZBTB12Q9Y330 459 aaPredicted RBP24.91■■□□□ 1.58
COL11A2-204ENST00000395194 POLR2AP24928 1970 aaKnown RBP24.91■■□□□ 1.58
COL11A2-204ENST00000395194 TRIM28Q13263 835 aaKnown RBP24.9■■□□□ 1.58
COL11A2-204ENST00000395194 CYP4F22Q6NT55 531 aa24.9■■□□□ 1.58
COL11A2-204ENST00000395194 SEC31BQ9NQW1 1179 aa24.9■■□□□ 1.58
COL11A2-204ENST00000395194 POLLQ9UGP5 575 aa24.9■■□□□ 1.58
COL11A2-204ENST00000395194 LBX1P52954 281 aa24.89■■□□□ 1.58
COL11A2-204ENST00000395194 HIRAP54198 1017 aaPredicted RBP24.89■■□□□ 1.58
COL11A2-204ENST00000395194 CCDC184Q52MB2 194 aa24.89■■□□□ 1.58
COL11A2-204ENST00000395194 CAPNS2Q96L46 248 aa24.89■■□□□ 1.58
COL11A2-204ENST00000395194 CCDC85AQ96PX6 553 aaPredicted RBP24.89■■□□□ 1.58
COL11A2-204ENST00000395194 CNOT7Q9UIV1 285 aaKnown RBP24.89■■□□□ 1.58
COL11A2-204ENST00000395194 SCN9AQ15858 1988 aa24.89■■□□□ 1.57
COL11A2-204ENST00000395194 CDHR2Q9BYE9 1310 aa24.88■■□□□ 1.57
COL11A2-204ENST00000395194 THSD7BQ9C0I4 1608 aa24.88■■□□□ 1.57
COL11A2-204ENST00000395194 PSMD14O00487 310 aa24.88■■□□□ 1.57
COL11A2-204ENST00000395194 CELF2O95319 508 aaKnown RBP24.88■■□□□ 1.57
COL11A2-204ENST00000395194 DOK7Q18PE1 504 aa24.88■■□□□ 1.57
COL11A2-204ENST00000395194 MICALL2Q8IY33 904 aa24.88■■□□□ 1.57
COL11A2-204ENST00000395194 ZBTB38Q8NAP3 1195 aaPredicted RBP24.88■■□□□ 1.57
COL11A2-204ENST00000395194 ZNF408Q9H9D4 720 aa24.88■■□□□ 1.57
COL11A2-204ENST00000395194 SPEF2Q9C093 1822 aa24.87■■□□□ 1.57
COL11A2-204ENST00000395194 RPS8P62241 208 aaKnown RBP24.87■■□□□ 1.57
COL11A2-204ENST00000395194 TSPYL6Q8N831 410 aa24.87■■□□□ 1.57
COL11A2-204ENST00000395194 PRDM10Q9NQV6 1147 aa24.87■■□□□ 1.57
COL11A2-204ENST00000395194 ECE2O60344 883 aa24.86■■□□□ 1.57
COL11A2-204ENST00000395194 TSR2Q969E8 191 aaKnown RBP24.86■■□□□ 1.57
COL11A2-204ENST00000395194 KCNQ5Q9NR82 932 aa24.86■■□□□ 1.57
COL11A2-204ENST00000395194 TLL2Q9Y6L7 1015 aa24.86■■□□□ 1.57
COL11A2-204ENST00000395194 H7C1D1 291 aa24.85■■□□□ 1.57
COL11A2-204ENST00000395194 HSPA8P11142 646 aaKnown RBP24.85■■□□□ 1.57
COL11A2-204ENST00000395194 SAMD7Q7Z3H4 446 aa24.85■■□□□ 1.57
COL11A2-204ENST00000395194 TBC1D16Q8TBP0 767 aa24.85■■□□□ 1.57
COL11A2-204ENST00000395194 MYH3P11055 1940 aa24.84■■□□□ 1.57
COL11A2-204ENST00000395194 MAP2K1Q02750 393 aaPredicted RBP24.84■■□□□ 1.57
COL11A2-204ENST00000395194 CCDC30Q5VVM6 783 aa24.84■■□□□ 1.57
COL11A2-204ENST00000395194 CCDC191Q8NCU4 936 aa24.84■■□□□ 1.57
COL11A2-204ENST00000395194 CWC25Q9NXE8 425 aaPredicted RBP24.84■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms