RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 GRAPQ13588 217 aa14.59□□□□□ -0.07
IGHV4-28-201ENST00000390612 RTL5Q5HYW3 569 aaPredicted RBP14.59□□□□□ -0.07
IGHV4-28-201ENST00000390612 DIEXFQ68CQ4 756 aaKnown RBP14.59□□□□□ -0.07
IGHV4-28-201ENST00000390612 GRAPLQ8TC17 118 aaPredicted RBP14.59□□□□□ -0.07
IGHV4-28-201ENST00000390612 RTFDC1Q9BY42 306 aaPredicted RBP14.59□□□□□ -0.07
IGHV4-28-201ENST00000390612 CDHR2Q9BYE9 1310 aa14.59□□□□□ -0.07
IGHV4-28-201ENST00000390612 SCN4AP35499 1836 aa14.59□□□□□ -0.07
IGHV4-28-201ENST00000390612 LTBP1Q14766 1721 aa14.58□□□□□ -0.07
IGHV4-28-201ENST00000390612 H7C1W4 665 aa14.58□□□□□ -0.08
IGHV4-28-201ENST00000390612 FZD9O00144 591 aa14.58□□□□□ -0.08
IGHV4-28-201ENST00000390612 TOMM70O94826 608 aa14.58□□□□□ -0.08
IGHV4-28-201ENST00000390612 TMC4Q7Z404 712 aa14.58□□□□□ -0.08
IGHV4-28-201ENST00000390612 MIER1Q8N108 512 aa14.58□□□□□ -0.08
IGHV4-28-201ENST00000390612 DNAAF4Q8WXU2 420 aa14.58□□□□□ -0.08
IGHV4-28-201ENST00000390612 RRAGCQ9HB90 399 aa14.58□□□□□ -0.08
IGHV4-28-201ENST00000390612 PDE8AO60658 829 aa14.57□□□□□ -0.08
IGHV4-28-201ENST00000390612 HSP90B1P14625 803 aaKnown RBP14.57□□□□□ -0.08
IGHV4-28-201ENST00000390612 NEXNQ0ZGT2 675 aa14.57□□□□□ -0.08
IGHV4-28-201ENST00000390612 FKBP5Q13451 457 aaPredicted RBP14.57□□□□□ -0.08
IGHV4-28-201ENST00000390612 CWF19L2Q2TBE0 894 aaKnown RBP14.57□□□□□ -0.08
IGHV4-28-201ENST00000390612 JARID2Q92833 1246 aaPredicted RBP14.57□□□□□ -0.08
IGHV4-28-201ENST00000390612 CELF1Q92879 486 aaKnown RBP14.57□□□□□ -0.08
IGHV4-28-201ENST00000390612 CDCA7LQ96GN5 454 aa14.57□□□□□ -0.08
IGHV4-28-201ENST00000390612 VPS33BQ9H267 617 aa14.57□□□□□ -0.08
IGHV4-28-201ENST00000390612 DUOX1Q9NRD9 1551 aa14.56□□□□□ -0.08
IGHV4-28-201ENST00000390612 VEGFAP15692 232 aaPredicted RBP14.56□□□□□ -0.08
IGHV4-28-201ENST00000390612 CASP7P55210 303 aa14.56□□□□□ -0.08
IGHV4-28-201ENST00000390612 GCKRQ14397 625 aa14.56□□□□□ -0.08
IGHV4-28-201ENST00000390612 DPY19L2Q6NUT2 758 aa14.56□□□□□ -0.08
IGHV4-28-201ENST00000390612 LINS1Q8NG48 757 aa14.56□□□□□ -0.08
IGHV4-28-201ENST00000390612 DDNO94850 711 aaPredicted RBP14.55□□□□□ -0.08
IGHV4-28-201ENST00000390612 RPS8P62241 208 aaKnown RBP14.55□□□□□ -0.08
IGHV4-28-201ENST00000390612 RBM46Q8TBY0 533 aaKnown RBP14.55□□□□□ -0.08
IGHV4-28-201ENST00000390612 L3MBTL3Q96JM7 780 aaPredicted RBP14.55□□□□□ -0.08
IGHV4-28-201ENST00000390612 BEND3Q5T5X7 828 aa14.54□□□□□ -0.08
IGHV4-28-201ENST00000390612 MPNDQ8N594 471 aa14.54□□□□□ -0.08
IGHV4-28-201ENST00000390612 MRPL50Q8N5N7 158 aaKnown RBP14.54□□□□□ -0.08
IGHV4-28-201ENST00000390612 TTLL11Q8NHH1 800 aa14.54□□□□□ -0.08
IGHV4-28-201ENST00000390612 PLA2G12BQ9BX93 195 aa14.54□□□□□ -0.08
IGHV4-28-201ENST00000390612 SEC31BQ9NQW1 1179 aa14.54□□□□□ -0.08
IGHV4-28-201ENST00000390612 ZNF541Q9H0D2 1346 aa14.54□□□□□ -0.08
IGHV4-28-201ENST00000390612 RTL9Q8NET4 1388 aa14.54□□□□□ -0.08
IGHV4-28-201ENST00000390612 SPEF2Q9C093 1822 aa14.53□□□□□ -0.08
IGHV4-28-201ENST00000390612 F6X3S4 739 aa14.53□□□□□ -0.08
IGHV4-28-201ENST00000390612 CTSWP56202 376 aa14.53□□□□□ -0.08
IGHV4-28-201ENST00000390612 CCDC152Q4G0S7 254 aa14.53□□□□□ -0.08
IGHV4-28-201ENST00000390612 DPP8Q6V1X1 898 aaPredicted RBP14.52□□□□□ -0.09
IGHV4-28-201ENST00000390612 UBE3BQ7Z3V4 1068 aa14.52□□□□□ -0.09
IGHV4-28-201ENST00000390612 SUPT20HQ8NEM7 779 aa14.52□□□□□ -0.09
IGHV4-28-201ENST00000390612 SSH1Q8WYL5 1049 aa14.52□□□□□ -0.09
IGHV4-28-201ENST00000390612 TMX4Q9H1E5 349 aaPredicted RBP14.52□□□□□ -0.09
IGHV4-28-201ENST00000390612 CSF1RP07333 972 aa14.51□□□□□ -0.09
IGHV4-28-201ENST00000390612 HSPA6P17066 643 aa14.51□□□□□ -0.09
IGHV4-28-201ENST00000390612 KIAA2012Q0VF49 1180 aa14.51□□□□□ -0.09
IGHV4-28-201ENST00000390612 FSTL1Q12841 308 aa14.51□□□□□ -0.09
IGHV4-28-201ENST00000390612 LARGE2Q8N3Y3 721 aa14.51□□□□□ -0.09
IGHV4-28-201ENST00000390612 JDP2Q8WYK2 163 aa14.51□□□□□ -0.09
IGHV4-28-201ENST00000390612 PODXL2Q9NZ53 605 aa14.51□□□□□ -0.09
IGHV4-28-201ENST00000390612 PPIP5K2O43314 1243 aa14.5□□□□□ -0.09
IGHV4-28-201ENST00000390612 CT47B1P0C2W7 299 aaPredicted RBP14.5□□□□□ -0.09
IGHV4-28-201ENST00000390612 AOC3Q16853 763 aa14.5□□□□□ -0.09
IGHV4-28-201ENST00000390612 ALDH1L2Q3SY69 923 aa14.5□□□□□ -0.09
IGHV4-28-201ENST00000390612 GPC2Q8N158 579 aa14.5□□□□□ -0.09
IGHV4-28-201ENST00000390612 POLLQ9UGP5 575 aa14.5□□□□□ -0.09
IGHV4-28-201ENST00000390612 SCN9AQ15858 1988 aa14.5□□□□□ -0.09
IGHV4-28-201ENST00000390612 ADAMTSL1Q8N6G6 1762 aa14.5□□□□□ -0.09
IGHV4-28-201ENST00000390612 ALDH1L1O75891 902 aa14.49□□□□□ -0.09
IGHV4-28-201ENST00000390612 GPSM2P81274 684 aa14.49□□□□□ -0.09
IGHV4-28-201ENST00000390612 C16orf71Q8IYS4 520 aaPredicted RBP14.49□□□□□ -0.09
IGHV4-28-201ENST00000390612 GREM2Q9H772 168 aa14.49□□□□□ -0.09
IGHV4-28-201ENST00000390612 PSME4Q14997 1843 aa14.48□□□□□ -0.09
IGHV4-28-201ENST00000390612 PTPRCP08575 1304 aa14.48□□□□□ -0.09
IGHV4-28-201ENST00000390612 BRPF1P55201 1214 aaPredicted RBP14.48□□□□□ -0.09
IGHV4-28-201ENST00000390612 FOXO4P98177 505 aa14.48□□□□□ -0.09
IGHV4-28-201ENST00000390612 NIM1KQ8IY84 436 aa14.48□□□□□ -0.09
IGHV4-28-201ENST00000390612 CCDC85AQ96PX6 553 aaPredicted RBP14.48□□□□□ -0.09
IGHV4-28-201ENST00000390612 TAF1DQ9H5J8 278 aaPredicted RBP14.48□□□□□ -0.09
IGHV4-28-201ENST00000390612 ZNRF3Q9ULT6 936 aa14.48□□□□□ -0.09
IGHV4-28-201ENST00000390612 NSFL1CQ9UNZ2 370 aaKnown RBP14.48□□□□□ -0.09
IGHV4-28-201ENST00000390612 UTYO14607 1347 aa14.47□□□□□ -0.09
IGHV4-28-201ENST00000390612 PCNTO95613 3336 aa14.47□□□□□ -0.09
IGHV4-28-201ENST00000390612 IQCA1LA6NCM1 817 aa14.47□□□□□ -0.09
IGHV4-28-201ENST00000390612 GRM8O00222 908 aa14.47□□□□□ -0.09
IGHV4-28-201ENST00000390612 EIF6P56537 245 aaKnown RBP14.47□□□□□ -0.09
IGHV4-28-201ENST00000390612 CXCL9Q07325 125 aa14.47□□□□□ -0.09
IGHV4-28-201ENST00000390612 ANKRD18AQ8IVF6 992 aa14.47□□□□□ -0.09
IGHV4-28-201ENST00000390612 SMC1BQ8NDV3 1235 aa14.47□□□□□ -0.09
IGHV4-28-201ENST00000390612 TBC1D16Q8TBP0 767 aa14.47□□□□□ -0.09
IGHV4-28-201ENST00000390612 CDC5LQ99459 802 aaKnown RBP14.47□□□□□ -0.09
IGHV4-28-201ENST00000390612 BSDC1Q9NW68 430 aaPredicted RBP14.47□□□□□ -0.09
IGHV4-28-201ENST00000390612 A0A1B0GUL6 1792 aa14.47□□□□□ -0.09
IGHV4-28-201ENST00000390612 YDJCA8MPS7 323 aa14.46□□□□□ -0.09
IGHV4-28-201ENST00000390612 SRCIN1Q9C0H9 1055 aa14.46□□□□□ -0.09
IGHV4-28-201ENST00000390612 POTEIP0CG38 1075 aa14.45□□□□□ -0.1
IGHV4-28-201ENST00000390612 POTEJP0CG39 1038 aa14.45□□□□□ -0.1
IGHV4-28-201ENST00000390612 SCNN1DP51172 638 aa14.45□□□□□ -0.1
IGHV4-28-201ENST00000390612 WASHC4Q2M389 1173 aa14.45□□□□□ -0.1
IGHV4-28-201ENST00000390612 FAM161AQ3B820 660 aa14.45□□□□□ -0.1
IGHV4-28-201ENST00000390612 EPHA10Q5JZY3 1008 aa14.45□□□□□ -0.1
IGHV4-28-201ENST00000390612 KAZALD1Q96I82 304 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms