RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 MRC1P22897 1456 aa15.36■□□□□ 0.05
MSH5-204ENST00000375755 RIC3Q7Z5B4 369 aa15.36■□□□□ 0.05
MSH5-204ENST00000375755 KAZALD1Q96I82 304 aa15.36■□□□□ 0.05
MSH5-204ENST00000375755 PCDH11XQ9BZA7 1347 aa15.36■□□□□ 0.05
MSH5-204ENST00000375755 PCDH11YQ9BZA8 1340 aa15.36■□□□□ 0.05
MSH5-204ENST00000375755 GLI3P10071 1580 aa15.36■□□□□ 0.05
MSH5-204ENST00000375755 SNRPA1P09661 255 aaKnown RBP15.35■□□□□ 0.05
MSH5-204ENST00000375755 SYT1P21579 422 aa15.35■□□□□ 0.05
MSH5-204ENST00000375755 UNC5CLQ8IV45 518 aa15.35■□□□□ 0.05
MSH5-204ENST00000375755 GOLGA6L6A8MZA4 724 aa15.35■□□□□ 0.05
MSH5-204ENST00000375755 STX6O43752 255 aa15.35■□□□□ 0.05
MSH5-204ENST00000375755 FMNL2Q96PY5 1086 aa15.35■□□□□ 0.05
MSH5-204ENST00000375755 LARP6Q9BRS8 491 aaKnown RBP15.35■□□□□ 0.05
MSH5-204ENST00000375755 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.35■□□□□ 0.05
MSH5-204ENST00000375755 F13A1P00488 732 aa15.35■□□□□ 0.05
MSH5-204ENST00000375755 POLA2Q14181 598 aa15.35■□□□□ 0.05
MSH5-204ENST00000375755 SUCLG2Q96I99 432 aa15.35■□□□□ 0.05
MSH5-204ENST00000375755 MYD88Q99836 296 aa15.35■□□□□ 0.05
MSH5-204ENST00000375755 MAP4K4O95819 1239 aaPredicted RBP15.34■□□□□ 0.05
MSH5-204ENST00000375755 SLFN14P0C7P3 912 aa15.34■□□□□ 0.05
MSH5-204ENST00000375755 GABPB1Q06547 395 aaPredicted RBP15.34■□□□□ 0.05
MSH5-204ENST00000375755 C16orf45Q96MC5 204 aaPredicted RBP15.34■□□□□ 0.05
MSH5-204ENST00000375755 LRMPQ12912 555 aa15.34■□□□□ 0.05
MSH5-204ENST00000375755 DDX41Q9UJV9 622 aaKnown RBP15.34■□□□□ 0.05
MSH5-204ENST00000375755 NBPF26B4DH59 902 aa15.33■□□□□ 0.05
MSH5-204ENST00000375755 ATP5J2-PTCD1G3V325 749 aa15.33■□□□□ 0.05
MSH5-204ENST00000375755 DTNBO60941 627 aa15.33■□□□□ 0.05
MSH5-204ENST00000375755 A1BGP04217 495 aa15.33■□□□□ 0.05
MSH5-204ENST00000375755 SYCP1Q15431 976 aa15.33■□□□□ 0.05
MSH5-204ENST00000375755 NBPF14Q5TI25 921 aa15.33■□□□□ 0.05
MSH5-204ENST00000375755 NBPF10Q6P3W6 841 aaKnown RBP15.33■□□□□ 0.05
MSH5-204ENST00000375755 NBPF15Q8N660 670 aa15.33■□□□□ 0.05
MSH5-204ENST00000375755 PHLPP1O60346 1717 aa15.33■□□□□ 0.05
MSH5-204ENST00000375755 TUBGCP6Q96RT7 1819 aa15.33■□□□□ 0.05
MSH5-204ENST00000375755 SMTNL1A8MU46 457 aa15.33■□□□□ 0.04
MSH5-204ENST00000375755 ADAMTS2O95450 1211 aa15.33■□□□□ 0.04
MSH5-204ENST00000375755 KLHDC4Q8TBB5 520 aa15.33■□□□□ 0.04
MSH5-204ENST00000375755 TOGARAM1Q9Y4F4 1720 aa15.33■□□□□ 0.04
MSH5-204ENST00000375755 HSPA4P34932 840 aa15.32■□□□□ 0.04
MSH5-204ENST00000375755 BICC1Q9H694 974 aaKnown RBP15.32■□□□□ 0.04
MSH5-204ENST00000375755 DNM1Q05193 864 aaKnown RBP15.32■□□□□ 0.04
MSH5-204ENST00000375755 CCDC186Q7Z3E2 898 aa15.32■□□□□ 0.04
MSH5-204ENST00000375755 EPHA10Q5JZY3 1008 aa15.32■□□□□ 0.04
MSH5-204ENST00000375755 GRM8O00222 908 aa15.31■□□□□ 0.04
MSH5-204ENST00000375755 CCDC192P0DO97 292 aa15.31■□□□□ 0.04
MSH5-204ENST00000375755 PIP4K2BP78356 416 aa15.31■□□□□ 0.04
MSH5-204ENST00000375755 LINS1Q8NG48 757 aa15.31■□□□□ 0.04
MSH5-204ENST00000375755 NEURL1BA8MQ27 555 aa15.31■□□□□ 0.04
MSH5-204ENST00000375755 TTLL7Q6ZT98 887 aa15.31■□□□□ 0.04
MSH5-204ENST00000375755 ANKRD13DQ6ZTN6 518 aa15.31■□□□□ 0.04
MSH5-204ENST00000375755 RUFY3Q7L099 469 aa15.31■□□□□ 0.04
MSH5-204ENST00000375755 RHPN1Q8TCX5 695 aa15.31■□□□□ 0.04
MSH5-204ENST00000375755 TTC14Q96N46 770 aa15.31■□□□□ 0.04
MSH5-204ENST00000375755 NRBP1Q9UHY1 535 aa15.31■□□□□ 0.04
MSH5-204ENST00000375755 TNNT1P13805 278 aa15.3■□□□□ 0.04
MSH5-204ENST00000375755 AK2P54819 239 aa15.3■□□□□ 0.04
MSH5-204ENST00000375755 ASAP1Q9ULH1 1129 aa15.3■□□□□ 0.04
MSH5-204ENST00000375755 MORC2Q9Y6X9 1032 aaPredicted RBP15.3■□□□□ 0.04
MSH5-204ENST00000375755 ALDH1L1O75891 902 aa15.3■□□□□ 0.04
MSH5-204ENST00000375755 DDX58O95786 925 aaKnown RBP15.3■□□□□ 0.04
MSH5-204ENST00000375755 LUZP1Q86V48 1076 aa15.3■□□□□ 0.04
MSH5-204ENST00000375755 FAM200AQ8TCP9 573 aa15.3■□□□□ 0.04
MSH5-204ENST00000375755 CHMP4AQ9BY43 222 aa15.3■□□□□ 0.04
MSH5-204ENST00000375755 SMC3Q9UQE7 1217 aa15.3■□□□□ 0.04
MSH5-204ENST00000375755 PAXIP1Q6ZW49 1069 aaPredicted RBP15.3■□□□□ 0.04
MSH5-204ENST00000375755 KIF18AQ8NI77 898 aa15.3■□□□□ 0.04
MSH5-204ENST00000375755 NKX1-1Q15270 411 aaPredicted RBP15.29■□□□□ 0.04
MSH5-204ENST00000375755 KLHL34Q8N239 644 aa15.29■□□□□ 0.04
MSH5-204ENST00000375755 SIL1Q9H173 461 aa15.29■□□□□ 0.04
MSH5-204ENST00000375755 ATP6V1DQ9Y5K8 247 aa15.29■□□□□ 0.04
MSH5-204ENST00000375755 SNX14Q9Y5W7 946 aa15.29■□□□□ 0.04
MSH5-204ENST00000375755 KCPQ6ZWJ8 1503 aa15.29■□□□□ 0.04
MSH5-204ENST00000375755 ERVV-2B6SEH9 535 aa15.29■□□□□ 0.04
MSH5-204ENST00000375755 LARGE1O95461 756 aa15.29■□□□□ 0.04
MSH5-204ENST00000375755 METTL22Q9BUU2 404 aaPredicted RBP15.29■□□□□ 0.04
MSH5-204ENST00000375755 STAP2Q9UGK3 403 aa15.29■□□□□ 0.04
MSH5-204ENST00000375755 MRVI1Q9Y6F6 885 aa15.29■□□□□ 0.04
MSH5-204ENST00000375755 NUTM2BA6NNL0 878 aaPredicted RBP15.28■□□□□ 0.04
MSH5-204ENST00000375755 NUTM2EB1AL46 878 aaPredicted RBP15.28■□□□□ 0.04
MSH5-204ENST00000375755 GCKRQ14397 625 aa15.28■□□□□ 0.04
MSH5-204ENST00000375755 NUTM2AQ8IVF1 878 aaPredicted RBP15.28■□□□□ 0.04
MSH5-204ENST00000375755 MTMR6Q9Y217 621 aa15.28■□□□□ 0.04
MSH5-204ENST00000375755 ZNF330Q9Y3S2 320 aaPredicted RBP15.28■□□□□ 0.04
MSH5-204ENST00000375755 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.28■□□□□ 0.04
MSH5-204ENST00000375755 TERF2Q15554 542 aa15.28■□□□□ 0.04
MSH5-204ENST00000375755 RASEFQ8IZ41 740 aa15.28■□□□□ 0.04
MSH5-204ENST00000375755 CCDC112Q8NEF3 446 aa15.28■□□□□ 0.04
MSH5-204ENST00000375755 PIGBQ92521 554 aa15.28■□□□□ 0.04
MSH5-204ENST00000375755 LIMCH1Q9UPQ0 1083 aa15.28■□□□□ 0.04
MSH5-204ENST00000375755 AFDNP55196 1824 aaKnown RBP15.28■□□□□ 0.04
MSH5-204ENST00000375755 OS9Q13438 667 aaPredicted RBP15.28■□□□□ 0.04
MSH5-204ENST00000375755 ZSCAN25Q6NSZ9 544 aa15.28■□□□□ 0.04
MSH5-204ENST00000375755 CHMP3Q9Y3E7 222 aa15.28■□□□□ 0.04
MSH5-204ENST00000375755 UBR2Q8IWV8 1755 aa15.27■□□□□ 0.04
MSH5-204ENST00000375755 ARFGEF2Q9Y6D5 1785 aa15.27■□□□□ 0.04
MSH5-204ENST00000375755 CPA1P15085 419 aa15.27■□□□□ 0.04
MSH5-204ENST00000375755 TYRO3Q06418 890 aa15.27■□□□□ 0.04
MSH5-204ENST00000375755 CAMK4Q16566 473 aa15.27■□□□□ 0.04
MSH5-204ENST00000375755 DRC7Q8IY82 874 aa15.27■□□□□ 0.04
MSH5-204ENST00000375755 ZBTB3Q9H5J0 574 aa15.27■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms