RNA–Protein interactions for RNA: ENST00000373162.5

TRAPPC3-202, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-202ENST00000373162 PCCAP05165 728 aaPredicted RBP23.18■■□□□ 1.3
TRAPPC3-202ENST00000373162 IGKV5-2P06315 115 aa23.18■■□□□ 1.3
TRAPPC3-202ENST00000373162 POTEIP0CG38 1075 aa23.18■■□□□ 1.3
TRAPPC3-202ENST00000373162 POTEJP0CG39 1038 aa23.18■■□□□ 1.3
TRAPPC3-202ENST00000373162 DDX46Q7L014 1031 aaKnown RBP23.18■■□□□ 1.3
TRAPPC3-202ENST00000373162 VPS33BQ9H267 617 aa23.18■■□□□ 1.3
TRAPPC3-202ENST00000373162 TAF1DQ9H5J8 278 aaPredicted RBP23.18■■□□□ 1.3
TRAPPC3-202ENST00000373162 TCERG1O14776 1098 aaKnown RBP23.17■■□□□ 1.3
TRAPPC3-202ENST00000373162 VAMP4O75379 141 aa23.17■■□□□ 1.3
TRAPPC3-202ENST00000373162 KSR2Q6VAB6 950 aa23.17■■□□□ 1.3
TRAPPC3-202ENST00000373162 CELF1Q92879 486 aaKnown RBP23.17■■□□□ 1.3
TRAPPC3-202ENST00000373162 PI4KAP2A4QPH2 592 aa23.16■■□□□ 1.3
TRAPPC3-202ENST00000373162 TMC4Q7Z404 712 aa23.16■■□□□ 1.3
TRAPPC3-202ENST00000373162 GPC2Q8N158 579 aa23.16■■□□□ 1.3
TRAPPC3-202ENST00000373162 PI4KAP1Q8N8J0 262 aa23.16■■□□□ 1.3
TRAPPC3-202ENST00000373162 MAP3K2Q9Y2U5 619 aa23.16■■□□□ 1.3
TRAPPC3-202ENST00000373162 CDHR2Q9BYE9 1310 aa23.15■■□□□ 1.3
TRAPPC3-202ENST00000373162 IQCA1LA6NCM1 817 aa23.15■■□□□ 1.3
TRAPPC3-202ENST00000373162 DDX58O95786 925 aaKnown RBP23.15■■□□□ 1.3
TRAPPC3-202ENST00000373162 HTRA3P83110 453 aa23.14■■□□□ 1.29
TRAPPC3-202ENST00000373162 AOC3Q16853 763 aa23.14■■□□□ 1.29
TRAPPC3-202ENST00000373162 RTL5Q5HYW3 569 aaPredicted RBP23.14■■□□□ 1.29
TRAPPC3-202ENST00000373162 FAM9BQ8IZU0 186 aa23.14■■□□□ 1.29
TRAPPC3-202ENST00000373162 JDP2Q8WYK2 163 aa23.14■■□□□ 1.29
TRAPPC3-202ENST00000373162 CWC25Q9NXE8 425 aaPredicted RBP23.14■■□□□ 1.29
TRAPPC3-202ENST00000373162 EXOSC9Q06265 439 aaKnown RBP23.13■■□□□ 1.29
TRAPPC3-202ENST00000373162 KIAA2012Q0VF49 1180 aa23.13■■□□□ 1.29
TRAPPC3-202ENST00000373162 LARGE2Q8N3Y3 721 aa23.13■■□□□ 1.29
TRAPPC3-202ENST00000373162 MPNDQ8N594 471 aa23.13■■□□□ 1.29
TRAPPC3-202ENST00000373162 STK31Q9BXU1 1019 aa23.13■■□□□ 1.29
TRAPPC3-202ENST00000373162 SALL2Q9Y467 1007 aaPredicted RBP23.13■■□□□ 1.29
TRAPPC3-202ENST00000373162 MYH3P11055 1940 aa23.13■■□□□ 1.29
TRAPPC3-202ENST00000373162 PPIP5K2O43314 1243 aa23.12■■□□□ 1.29
TRAPPC3-202ENST00000373162 SLC4A2P04920 1241 aa23.12■■□□□ 1.29
TRAPPC3-202ENST00000373162 CHADLQ6NUI6 762 aa23.12■■□□□ 1.29
TRAPPC3-202ENST00000373162 DPP8Q6V1X1 898 aaPredicted RBP23.12■■□□□ 1.29
TRAPPC3-202ENST00000373162 SUPT20HQ8NEM7 779 aa23.12■■□□□ 1.29
TRAPPC3-202ENST00000373162 SCNN1DP51172 638 aa23.11■■□□□ 1.29
TRAPPC3-202ENST00000373162 FLIIQ13045 1269 aa23.11■■□□□ 1.29
TRAPPC3-202ENST00000373162 HACL1Q9UJ83 578 aa23.11■■□□□ 1.29
TRAPPC3-202ENST00000373162 PASKQ96RG2 1323 aa23.1■■□□□ 1.29
TRAPPC3-202ENST00000373162 NEURL1BA8MQ27 555 aa23.1■■□□□ 1.29
TRAPPC3-202ENST00000373162 PDE8AO60658 829 aa23.1■■□□□ 1.29
TRAPPC3-202ENST00000373162 LDHDQ86WU2 507 aa23.1■■□□□ 1.29
TRAPPC3-202ENST00000373162 SEC31BQ9NQW1 1179 aa23.1■■□□□ 1.29
TRAPPC3-202ENST00000373162 CASP7P55210 303 aa23.09■■□□□ 1.29
TRAPPC3-202ENST00000373162 EIF6P56537 245 aaKnown RBP23.09■■□□□ 1.29
TRAPPC3-202ENST00000373162 CWF19L2Q2TBE0 894 aaKnown RBP23.09■■□□□ 1.29
TRAPPC3-202ENST00000373162 NIM1KQ8IY84 436 aa23.09■■□□□ 1.29
TRAPPC3-202ENST00000373162 JARID2Q92833 1246 aaPredicted RBP23.09■■□□□ 1.29
TRAPPC3-202ENST00000373162 EPHX2P34913 555 aa23.08■■□□□ 1.29
TRAPPC3-202ENST00000373162 JMYQ8N9B5 988 aa23.08■■□□□ 1.29
TRAPPC3-202ENST00000373162 ZNRF3Q9ULT6 936 aa23.08■■□□□ 1.29
TRAPPC3-202ENST00000373162 RTL9Q8NET4 1388 aa23.08■■□□□ 1.29
TRAPPC3-202ENST00000373162 H7C1W4 665 aa23.07■■□□□ 1.28
TRAPPC3-202ENST00000373162 ITGBL1O95965 494 aaPredicted RBP23.07■■□□□ 1.28
TRAPPC3-202ENST00000373162 HSP90B1P14625 803 aaKnown RBP23.07■■□□□ 1.28
TRAPPC3-202ENST00000373162 RPS8P62241 208 aaKnown RBP23.07■■□□□ 1.28
TRAPPC3-202ENST00000373162 GPSM2P81274 684 aa23.07■■□□□ 1.28
TRAPPC3-202ENST00000373162 CXCL9Q07325 125 aa23.07■■□□□ 1.28
TRAPPC3-202ENST00000373162 KLRG1Q96E93 195 aa23.07■■□□□ 1.28
TRAPPC3-202ENST00000373162 POLLQ9UGP5 575 aa23.07■■□□□ 1.28
TRAPPC3-202ENST00000373162 YDJCA8MPS7 323 aa23.06■■□□□ 1.28
TRAPPC3-202ENST00000373162 TMX4Q9H1E5 349 aaPredicted RBP23.06■■□□□ 1.28
TRAPPC3-202ENST00000373162 PODXL2Q9NZ53 605 aa23.06■■□□□ 1.28
TRAPPC3-202ENST00000373162 CTSWP56202 376 aa23.05■■□□□ 1.28
TRAPPC3-202ENST00000373162 MYH16Q9H6N6 1097 aa23.05■■□□□ 1.28
TRAPPC3-202ENST00000373162 SCN9AQ15858 1988 aa23.04■■□□□ 1.28
TRAPPC3-202ENST00000373162 GCKRQ14397 625 aa23.04■■□□□ 1.28
TRAPPC3-202ENST00000373162 CCDC152Q4G0S7 254 aa23.04■■□□□ 1.28
TRAPPC3-202ENST00000373162 TTLL11Q8NHH1 800 aa23.04■■□□□ 1.28
TRAPPC3-202ENST00000373162 DNAAF4Q8WXU2 420 aa23.04■■□□□ 1.28
TRAPPC3-202ENST00000373162 PLA2G12BQ9BX93 195 aa23.04■■□□□ 1.28
TRAPPC3-202ENST00000373162 GJA3Q9Y6H8 435 aa23.04■■□□□ 1.28
TRAPPC3-202ENST00000373162 EPS15P42566 896 aa23.03■■□□□ 1.28
TRAPPC3-202ENST00000373162 NEXNQ0ZGT2 675 aa23.03■■□□□ 1.28
TRAPPC3-202ENST00000373162 PNMA8AQ86V59 439 aaPredicted RBP23.03■■□□□ 1.28
TRAPPC3-202ENST00000373162 TBC1D16Q8TBP0 767 aa23.03■■□□□ 1.28
TRAPPC3-202ENST00000373162 PSME4Q14997 1843 aa23.03■■□□□ 1.28
TRAPPC3-202ENST00000373162 SPEF2Q9C093 1822 aa23.03■■□□□ 1.28
TRAPPC3-202ENST00000373162 FKBP5Q13451 457 aaPredicted RBP23.02■■□□□ 1.28
TRAPPC3-202ENST00000373162 LINS1Q8NG48 757 aa23.02■■□□□ 1.28
TRAPPC3-202ENST00000373162 GPRC5DQ9NZD1 345 aa23.02■■□□□ 1.28
TRAPPC3-202ENST00000373162 NSFL1CQ9UNZ2 370 aaKnown RBP23.02■■□□□ 1.28
TRAPPC3-202ENST00000373162 ZNF646O15015 1829 aaPredicted RBP23.01■■□□□ 1.27
TRAPPC3-202ENST00000373162 BEND3Q5T5X7 828 aa23■■□□□ 1.27
TRAPPC3-202ENST00000373162 CIAPIN1Q6FI81 312 aa23■■□□□ 1.27
TRAPPC3-202ENST00000373162 UBE3BQ7Z3V4 1068 aa23■■□□□ 1.27
TRAPPC3-202ENST00000373162 CREBZFQ9NS37 354 aa23■■□□□ 1.27
TRAPPC3-202ENST00000373162 ZNF609O15014 1411 aa22.99■■□□□ 1.27
TRAPPC3-202ENST00000373162 WASHC4Q2M389 1173 aa22.99■■□□□ 1.27
TRAPPC3-202ENST00000373162 EAPPQ56P03 285 aaPredicted RBP22.99■■□□□ 1.27
TRAPPC3-202ENST00000373162 CCDC85AQ96PX6 553 aaPredicted RBP22.99■■□□□ 1.27
TRAPPC3-202ENST00000373162 GREM2Q9H772 168 aa22.99■■□□□ 1.27
TRAPPC3-202ENST00000373162 A0A1B0GUL6 1792 aa22.99■■□□□ 1.27
TRAPPC3-202ENST00000373162 CSF1RP07333 972 aa22.98■■□□□ 1.27
TRAPPC3-202ENST00000373162 GMPSP49915 693 aaPredicted RBP22.98■■□□□ 1.27
TRAPPC3-202ENST00000373162 USP50Q70EL3 339 aaPredicted RBP22.98■■□□□ 1.27
TRAPPC3-202ENST00000373162 GPR101Q96P66 508 aaPredicted RBP22.98■■□□□ 1.27
TRAPPC3-202ENST00000373162 F6X3S4 739 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms