RNA–Protein interactions for RNA: ENST00000350498.7

PDAP1-201, Transcript of PDGFA associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDAP1, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-201ENST00000350498 ZSCAN22P10073 491 aaPredicted RBP19.86■□□□□ 0.77
PDAP1-201ENST00000350498 FAM173BQ6P4H8 233 aa19.86■□□□□ 0.77
PDAP1-201ENST00000350498 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.86■□□□□ 0.77
PDAP1-201ENST00000350498 VSIG10Q8N0Z9 540 aa19.86■□□□□ 0.77
PDAP1-201ENST00000350498 COPRSQ9NQ92 184 aa19.86■□□□□ 0.77
PDAP1-201ENST00000350498 FIBPO43427 364 aa19.85■□□□□ 0.77
PDAP1-201ENST00000350498 STK3Q13188 491 aa19.85■□□□□ 0.77
PDAP1-201ENST00000350498 HDAC5Q9UQL6 1122 aa19.85■□□□□ 0.77
PDAP1-201ENST00000350498 TIMM10P62072 90 aa19.85■□□□□ 0.77
PDAP1-201ENST00000350498 HS1BP3Q53T59 392 aa19.85■□□□□ 0.77
PDAP1-201ENST00000350498 CCDC85AQ96PX6 553 aaPredicted RBP19.85■□□□□ 0.77
PDAP1-201ENST00000350498 ARID3AQ99856 593 aa19.85■□□□□ 0.77
PDAP1-201ENST00000350498 VPS53Q5VIR6 699 aa19.84■□□□□ 0.77
PDAP1-201ENST00000350498 USP25Q9UHP3 1055 aa19.84■□□□□ 0.77
PDAP1-201ENST00000350498 PTMAP06454 111 aaKnown RBP19.84■□□□□ 0.77
PDAP1-201ENST00000350498 FOXO4P98177 505 aa19.84■□□□□ 0.77
PDAP1-201ENST00000350498 ZCRB1Q8TBF4 217 aaKnown RBP19.84■□□□□ 0.77
PDAP1-201ENST00000350498 KCNB2Q92953 911 aa19.84■□□□□ 0.77
PDAP1-201ENST00000350498 GLI3P10071 1580 aa19.84■□□□□ 0.77
PDAP1-201ENST00000350498 A0A0G2JLW4 131 aa19.83■□□□□ 0.77
PDAP1-201ENST00000350498 DNM1Q05193 864 aaKnown RBP19.83■□□□□ 0.77
PDAP1-201ENST00000350498 FERMT3Q86UX7 667 aa19.83■□□□□ 0.77
PDAP1-201ENST00000350498 C17orf53Q8N3J3 647 aaPredicted RBP19.83■□□□□ 0.77
PDAP1-201ENST00000350498 PLBD2Q8NHP8 589 aa19.83■□□□□ 0.77
PDAP1-201ENST00000350498 FAM13BQ9NYF5 915 aa19.83■□□□□ 0.77
PDAP1-201ENST00000350498 HCLS1P14317 486 aaPredicted RBP19.83■□□□□ 0.76
PDAP1-201ENST00000350498 RABL6Q3YEC7 729 aaPredicted RBP19.83■□□□□ 0.76
PDAP1-201ENST00000350498 NEUROD6Q96NK8 337 aa19.83■□□□□ 0.76
PDAP1-201ENST00000350498 ARFGEF2Q9Y6D5 1785 aa19.83■□□□□ 0.76
PDAP1-201ENST00000350498 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.83■□□□□ 0.76
PDAP1-201ENST00000350498 VPS37CA5D8V6 355 aaPredicted RBP19.82■□□□□ 0.76
PDAP1-201ENST00000350498 F13A1P00488 732 aa19.82■□□□□ 0.76
PDAP1-201ENST00000350498 ZKSCAN1P17029 563 aaPredicted RBP19.82■□□□□ 0.76
PDAP1-201ENST00000350498 LRRC24Q50LG9 513 aa19.82■□□□□ 0.76
PDAP1-201ENST00000350498 MTMR6Q9Y217 621 aa19.82■□□□□ 0.76
PDAP1-201ENST00000350498 TAF5LO75529 589 aa19.82■□□□□ 0.76
PDAP1-201ENST00000350498 LRRC2Q9BYS8 371 aa19.82■□□□□ 0.76
PDAP1-201ENST00000350498 PUS3Q9BZE2 481 aaKnown RBP19.82■□□□□ 0.76
PDAP1-201ENST00000350498 MED23Q9ULK4 1368 aa19.82■□□□□ 0.76
PDAP1-201ENST00000350498 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.81■□□□□ 0.76
PDAP1-201ENST00000350498 MRC1P22897 1456 aa19.81■□□□□ 0.76
PDAP1-201ENST00000350498 UQCRHLA0A096LP55 91 aa19.81■□□□□ 0.76
PDAP1-201ENST00000350498 UQCRHP07919 91 aa19.81■□□□□ 0.76
PDAP1-201ENST00000350498 CCDC39Q9UFE4 941 aa19.81■□□□□ 0.76
PDAP1-201ENST00000350498 TOB2Q14106 344 aaPredicted RBP19.8■□□□□ 0.76
PDAP1-201ENST00000350498 ATG9AQ7Z3C6 839 aa19.8■□□□□ 0.76
PDAP1-201ENST00000350498 ZNF609O15014 1411 aa19.8■□□□□ 0.76
PDAP1-201ENST00000350498 PPFIA3O75145 1194 aa19.8■□□□□ 0.76
PDAP1-201ENST00000350498 ATP5JP18859 108 aa19.8■□□□□ 0.76
PDAP1-201ENST00000350498 GIMAP6Q6P9H5 292 aa19.8■□□□□ 0.76
PDAP1-201ENST00000350498 LMTK3Q96Q04 1460 aa19.8■□□□□ 0.76
PDAP1-201ENST00000350498 WDR17Q8IZU2 1322 aa19.8■□□□□ 0.76
PDAP1-201ENST00000350498 TM6SF1Q9BZW5 370 aa19.79■□□□□ 0.76
PDAP1-201ENST00000350498 PKD1L3Q7Z443 1732 aa19.79■□□□□ 0.76
PDAP1-201ENST00000350498 PLCB2Q00722 1185 aa19.79■□□□□ 0.76
PDAP1-201ENST00000350498 SYNE4Q8N205 404 aa19.79■□□□□ 0.76
PDAP1-201ENST00000350498 SYAP1Q96A49 352 aaPredicted RBP19.79■□□□□ 0.76
PDAP1-201ENST00000350498 TTC12Q9H892 705 aaPredicted RBP19.79■□□□□ 0.76
PDAP1-201ENST00000350498 H7C1W4 665 aa19.78■□□□□ 0.76
PDAP1-201ENST00000350498 CDC37L1Q7L3B6 337 aa19.78■□□□□ 0.76
PDAP1-201ENST00000350498 XIRP1Q702N8 1843 aaKnown RBP19.78■□□□□ 0.76
PDAP1-201ENST00000350498 ZNF335Q9H4Z2 1342 aaPredicted RBP19.78■□□□□ 0.76
PDAP1-201ENST00000350498 GOLIM4O00461 696 aa19.78■□□□□ 0.76
PDAP1-201ENST00000350498 BLOC1S2Q6QNY1 142 aa19.78■□□□□ 0.76
PDAP1-201ENST00000350498 CPDO75976 1380 aa19.78■□□□□ 0.76
PDAP1-201ENST00000350498 SNRKQ9NRH2 765 aa19.77■□□□□ 0.76
PDAP1-201ENST00000350498 RPS6KB1P23443 525 aa19.77■□□□□ 0.76
PDAP1-201ENST00000350498 DCCP43146 1447 aa19.77■□□□□ 0.75
PDAP1-201ENST00000350498 HIP1O00291 1037 aa19.76■□□□□ 0.75
PDAP1-201ENST00000350498 TSC1Q92574 1164 aa19.76■□□□□ 0.75
PDAP1-201ENST00000350498 JAK2O60674 1132 aa19.76■□□□□ 0.75
PDAP1-201ENST00000350498 CYP21A2P08686 494 aa19.76■□□□□ 0.75
PDAP1-201ENST00000350498 CWC25Q9NXE8 425 aaPredicted RBP19.76■□□□□ 0.75
PDAP1-201ENST00000350498 SLAIN2Q9P270 581 aa19.76■□□□□ 0.75
PDAP1-201ENST00000350498 KAT6BQ8WYB5 2073 aa19.76■□□□□ 0.75
PDAP1-201ENST00000350498 PCDH11XQ9BZA7 1347 aa19.76■□□□□ 0.75
PDAP1-201ENST00000350498 PCDH11YQ9BZA8 1340 aa19.76■□□□□ 0.75
PDAP1-201ENST00000350498 AP5Z1O43299 807 aa19.75■□□□□ 0.75
PDAP1-201ENST00000350498 ADCY5O95622 1261 aa19.75■□□□□ 0.75
PDAP1-201ENST00000350498 CCDC183Q5T5S1 534 aa19.75■□□□□ 0.75
PDAP1-201ENST00000350498 LARP1BQ659C4 914 aaKnown RBP19.75■□□□□ 0.75
PDAP1-201ENST00000350498 ASAP1Q9ULH1 1129 aa19.75■□□□□ 0.75
PDAP1-201ENST00000350498 STOX1Q6ZVD7 989 aa19.75■□□□□ 0.75
PDAP1-201ENST00000350498 IL2RBP14784 551 aa19.74■□□□□ 0.75
PDAP1-201ENST00000350498 HAUS7Q99871 368 aa19.74■□□□□ 0.75
PDAP1-201ENST00000350498 TMEM87AQ8NBN3 555 aa19.74■□□□□ 0.75
PDAP1-201ENST00000350498 DDX11Q96FC9 970 aa19.74■□□□□ 0.75
PDAP1-201ENST00000350498 ZSCAN31Q96LW9 406 aaPredicted RBP19.74■□□□□ 0.75
PDAP1-201ENST00000350498 COL5A2P05997 1499 aaPredicted RBP19.74■□□□□ 0.75
PDAP1-201ENST00000350498 FOSBP53539 338 aa19.73■□□□□ 0.75
PDAP1-201ENST00000350498 FAM89AQ96GI7 184 aa19.73■□□□□ 0.75
PDAP1-201ENST00000350498 ZMYND15Q9H091 742 aa19.73■□□□□ 0.75
PDAP1-201ENST00000350498 SH2B1Q9NRF2 756 aaPredicted RBP19.73■□□□□ 0.75
PDAP1-201ENST00000350498 TFIP11Q9UBB9 837 aaKnown RBP19.73■□□□□ 0.75
PDAP1-201ENST00000350498 EVA1CP58658 441 aa19.73■□□□□ 0.75
PDAP1-201ENST00000350498 UBE2HP62256 183 aa19.73■□□□□ 0.75
PDAP1-201ENST00000350498 PDCL3Q9H2J4 239 aa19.73■□□□□ 0.75
PDAP1-201ENST00000350498 KCPQ6ZWJ8 1503 aa19.73■□□□□ 0.75
PDAP1-201ENST00000350498 PHF14O94880 888 aa19.72■□□□□ 0.75
PDAP1-201ENST00000350498 PSMA5P28066 241 aa19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms