RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 LSG1Q9H089 658 aaKnown RBP21.21■□□□□ 0.99
SPSB4-201ENST00000310546 DDX19AQ9NUU7 478 aaKnown RBP21.21■□□□□ 0.99
SPSB4-201ENST00000310546 RSPH14Q9UHP6 348 aa21.21■□□□□ 0.99
SPSB4-201ENST00000310546 XIRP1Q702N8 1843 aaKnown RBP21.21■□□□□ 0.99
SPSB4-201ENST00000310546 ADCK5Q3MIX3 580 aa21.21■□□□□ 0.99
SPSB4-201ENST00000310546 ARHGAP29Q52LW3 1261 aa21.21■□□□□ 0.99
SPSB4-201ENST00000310546 RGPD1P0DJD0 1748 aa21.21■□□□□ 0.99
SPSB4-201ENST00000310546 FLT4P35916 1363 aa21.2■□□□□ 0.98
SPSB4-201ENST00000310546 NEMFO60524 1076 aa21.2■□□□□ 0.98
SPSB4-201ENST00000310546 PLA2G4AP47712 749 aa21.2■□□□□ 0.98
SPSB4-201ENST00000310546 ME3Q16798 604 aa21.2■□□□□ 0.98
SPSB4-201ENST00000310546 CLSTN2Q9H4D0 955 aa21.2■□□□□ 0.98
SPSB4-201ENST00000310546 SBNO1A3KN83 1393 aa21.2■□□□□ 0.98
SPSB4-201ENST00000310546 GORABQ5T7V8 394 aa21.2■□□□□ 0.98
SPSB4-201ENST00000310546 KRBA2Q6ZNG9 492 aa21.19■□□□□ 0.98
SPSB4-201ENST00000310546 MARF1Q9Y4F3 1742 aaKnown RBP21.19■□□□□ 0.98
SPSB4-201ENST00000310546 RNF20Q5VTR2 975 aa21.19■□□□□ 0.98
SPSB4-201ENST00000310546 TMX1Q9H3N1 280 aa21.19■□□□□ 0.98
SPSB4-201ENST00000310546 CCZ1BP86790 482 aa21.18■□□□□ 0.98
SPSB4-201ENST00000310546 CCZ1P86791 482 aaPredicted RBP21.18■□□□□ 0.98
SPSB4-201ENST00000310546 ELP1O95163 1332 aa21.18■□□□□ 0.98
SPSB4-201ENST00000310546 NPHP3Q7Z494 1330 aa21.18■□□□□ 0.98
SPSB4-201ENST00000310546 CHL1O00533 1208 aa21.18■□□□□ 0.98
SPSB4-201ENST00000310546 GCP02774 474 aa21.18■□□□□ 0.98
SPSB4-201ENST00000310546 CDC25BP30305 580 aa21.18■□□□□ 0.98
SPSB4-201ENST00000310546 ST3GAL1Q11201 340 aa21.18■□□□□ 0.98
SPSB4-201ENST00000310546 SNW1Q13573 536 aaKnown RBP21.18■□□□□ 0.98
SPSB4-201ENST00000310546 SYT10Q6XYQ8 523 aa21.18■□□□□ 0.98
SPSB4-201ENST00000310546 SCAND2PQ9GZW5 306 aaPredicted RBP21.18■□□□□ 0.98
SPSB4-201ENST00000310546 ADGRL3Q9HAR2 1447 aa21.18■□□□□ 0.98
SPSB4-201ENST00000310546 BECN2A8MW95 431 aa21.18■□□□□ 0.98
SPSB4-201ENST00000310546 EPB41L2O43491 1005 aaKnown RBP21.18■□□□□ 0.98
SPSB4-201ENST00000310546 PRPF40BQ6NWY9 871 aaKnown RBP21.18■□□□□ 0.98
SPSB4-201ENST00000310546 ST5P78524 1137 aa21.17■□□□□ 0.98
SPSB4-201ENST00000310546 C10orf67Q8IYJ2 551 aa21.17■□□□□ 0.98
SPSB4-201ENST00000310546 NBPF6Q5VWK0 638 aa21.17■□□□□ 0.98
SPSB4-201ENST00000310546 NBPF4Q96M43 638 aa21.17■□□□□ 0.98
SPSB4-201ENST00000310546 SH2B1Q9NRF2 756 aaPredicted RBP21.17■□□□□ 0.98
SPSB4-201ENST00000310546 AXIN2Q9Y2T1 843 aa21.17■□□□□ 0.98
SPSB4-201ENST00000310546 CYP46A1Q9Y6A2 500 aa21.17■□□□□ 0.98
SPSB4-201ENST00000310546 A0A087WWV3 80 aa21.16■□□□□ 0.98
SPSB4-201ENST00000310546 ATP8B2P98198 1209 aa21.16■□□□□ 0.98
SPSB4-201ENST00000310546 CHRNA2Q15822 529 aa21.16■□□□□ 0.98
SPSB4-201ENST00000310546 C11orf57Q6ZUT1 292 aaPredicted RBP21.16■□□□□ 0.98
SPSB4-201ENST00000310546 LEO1Q8WVC0 666 aaPredicted RBP21.16■□□□□ 0.98
SPSB4-201ENST00000310546 RASSF4Q9H2L5 321 aa21.16■□□□□ 0.98
SPSB4-201ENST00000310546 ZCCHC17Q9NP64 241 aaKnown RBP21.16■□□□□ 0.98
SPSB4-201ENST00000310546 LRRFIP2Q9Y608 721 aaKnown RBP21.16■□□□□ 0.98
SPSB4-201ENST00000310546 TMCO3Q6UWJ1 677 aa21.16■□□□□ 0.98
SPSB4-201ENST00000310546 MRFAP1L1Q96HT8 127 aa21.16■□□□□ 0.98
SPSB4-201ENST00000310546 ZSCAN31Q96LW9 406 aaPredicted RBP21.16■□□□□ 0.98
SPSB4-201ENST00000310546 VPS53Q5VIR6 699 aa21.15■□□□□ 0.98
SPSB4-201ENST00000310546 RBM43Q6ZSC3 357 aaKnown RBP21.15■□□□□ 0.98
SPSB4-201ENST00000310546 LTBP4Q8N2S1 1624 aa21.15■□□□□ 0.98
SPSB4-201ENST00000310546 TRIM66O15016 1216 aa21.15■□□□□ 0.98
SPSB4-201ENST00000310546 FBXW7Q969H0 707 aa21.15■□□□□ 0.98
SPSB4-201ENST00000310546 TPM4P67936 248 aa21.15■□□□□ 0.98
SPSB4-201ENST00000310546 IQCB1Q15051 598 aa21.15■□□□□ 0.98
SPSB4-201ENST00000310546 TXLNBQ8N3L3 684 aa21.15■□□□□ 0.98
SPSB4-201ENST00000310546 SMARCE1Q969G3 411 aa21.14■□□□□ 0.97
SPSB4-201ENST00000310546 TPCN1Q9ULQ1 816 aa21.14■□□□□ 0.97
SPSB4-201ENST00000310546 KIF2AO00139 706 aaPredicted RBP21.13■□□□□ 0.97
SPSB4-201ENST00000310546 GNAI3P08754 354 aa21.13■□□□□ 0.97
SPSB4-201ENST00000310546 CNTROBQ8N137 903 aa21.13■□□□□ 0.97
SPSB4-201ENST00000310546 NFATC2IPQ8NCF5 419 aa21.13■□□□□ 0.97
SPSB4-201ENST00000310546 PGBD1Q96JS3 809 aa21.13■□□□□ 0.97
SPSB4-201ENST00000310546 ARHGEF10O15013 1369 aa21.13■□□□□ 0.97
SPSB4-201ENST00000310546 PTH1RQ03431 593 aa21.13■□□□□ 0.97
SPSB4-201ENST00000310546 UBXN4Q92575 508 aa21.13■□□□□ 0.97
SPSB4-201ENST00000310546 L2HGDHQ9H9P8 463 aa21.13■□□□□ 0.97
SPSB4-201ENST00000310546 ARGLU1Q9NWB6 273 aaPredicted RBP21.13■□□□□ 0.97
SPSB4-201ENST00000310546 SURF6O75683 361 aaKnown RBP21.12■□□□□ 0.97
SPSB4-201ENST00000310546 SEC31AO94979 1220 aaKnown RBP21.12■□□□□ 0.97
SPSB4-201ENST00000310546 SARM1Q6SZW1 724 aa21.12■□□□□ 0.97
SPSB4-201ENST00000310546 CCDC191Q8NCU4 936 aa21.12■□□□□ 0.97
SPSB4-201ENST00000310546 TCEANC2Q96MN5 208 aa21.12■□□□□ 0.97
SPSB4-201ENST00000310546 CEBPZQ03701 1054 aaKnown RBP21.12■□□□□ 0.97
SPSB4-201ENST00000310546 LCMT1Q9UIC8 334 aa21.12■□□□□ 0.97
SPSB4-201ENST00000310546 PDCP20941 246 aa21.11■□□□□ 0.97
SPSB4-201ENST00000310546 ZSCAN26Q16670 478 aa21.11■□□□□ 0.97
SPSB4-201ENST00000310546 LARP1Q6PKG0 1096 aaKnown RBP21.11■□□□□ 0.97
SPSB4-201ENST00000310546 HOMER1Q86YM7 354 aa21.11■□□□□ 0.97
SPSB4-201ENST00000310546 PI4K2BQ8TCG2 481 aa21.11■□□□□ 0.97
SPSB4-201ENST00000310546 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.11■□□□□ 0.97
SPSB4-201ENST00000310546 IGSF1Q8N6C5 1336 aa21.11■□□□□ 0.97
SPSB4-201ENST00000310546 MYO1CO00159 1063 aa21.11■□□□□ 0.97
SPSB4-201ENST00000310546 E4F1Q66K89 784 aaPredicted RBP21.11■□□□□ 0.97
SPSB4-201ENST00000310546 CAVIN2O95810 425 aa21.1■□□□□ 0.97
SPSB4-201ENST00000310546 GYS2P54840 703 aa21.1■□□□□ 0.97
SPSB4-201ENST00000310546 PPP1R13BQ96KQ4 1090 aa21.1■□□□□ 0.97
SPSB4-201ENST00000310546 ZRANB2O95218 330 aaKnown RBP eCLIP21.1■□□□□ 0.97
SPSB4-201ENST00000310546 STK3Q13188 491 aa21.1■□□□□ 0.97
SPSB4-201ENST00000310546 GPS2Q13227 327 aa21.1■□□□□ 0.97
SPSB4-201ENST00000310546 ZSWIM6Q9HCJ5 1215 aa21.1■□□□□ 0.97
SPSB4-201ENST00000310546 KDRP35968 1356 aa21.1■□□□□ 0.97
SPSB4-201ENST00000310546 AOX1Q06278 1338 aa21.09■□□□□ 0.97
SPSB4-201ENST00000310546 RAB11FIP3O75154 756 aa21.09■□□□□ 0.97
SPSB4-201ENST00000310546 EFCC1Q9HA90 598 aa21.09■□□□□ 0.97
SPSB4-201ENST00000310546 COL9A3Q14050 684 aaPredicted RBP21.09■□□□□ 0.97
SPSB4-201ENST00000310546 MUM1L1Q5H9M0 696 aa21.09■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms