RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 HSPA1BP0DMV9 641 aaKnown RBP27.26■■□□□ 1.95
NEDD8-201ENST00000250495 MAP1SQ66K74 1059 aaPredicted RBP27.26■■□□□ 1.95
NEDD8-201ENST00000250495 RIC3Q7Z5B4 369 aa27.26■■□□□ 1.95
NEDD8-201ENST00000250495 ZNF428Q96B54 188 aa27.26■■□□□ 1.95
NEDD8-201ENST00000250495 ADAMTSL1Q8N6G6 1762 aa27.25■■□□□ 1.95
NEDD8-201ENST00000250495 ELL2O00472 640 aaPredicted RBP27.25■■□□□ 1.95
NEDD8-201ENST00000250495 EPS15P42566 896 aa27.25■■□□□ 1.95
NEDD8-201ENST00000250495 SCNN1DP51172 638 aa27.25■■□□□ 1.95
NEDD8-201ENST00000250495 GOLGA2Q08379 1002 aa27.25■■□□□ 1.95
NEDD8-201ENST00000250495 SF3B3Q15393 1217 aaKnown RBP27.25■■□□□ 1.95
NEDD8-201ENST00000250495 COL13A1Q5TAT6 717 aaPredicted RBP27.24■■□□□ 1.95
NEDD8-201ENST00000250495 USP50Q70EL3 339 aaPredicted RBP27.24■■□□□ 1.95
NEDD8-201ENST00000250495 KIAA2012Q0VF49 1180 aa27.23■■□□□ 1.95
NEDD8-201ENST00000250495 CNTNAP1P78357 1384 aa27.22■■□□□ 1.95
NEDD8-201ENST00000250495 CXCL9Q07325 125 aa27.22■■□□□ 1.95
NEDD8-201ENST00000250495 PHAXQ9H814 394 aaKnown RBP27.22■■□□□ 1.95
NEDD8-201ENST00000250495 IRS4O14654 1257 aaPredicted RBP27.21■■□□□ 1.95
NEDD8-201ENST00000250495 HSP90B1P14625 803 aaKnown RBP27.21■■□□□ 1.95
NEDD8-201ENST00000250495 C8orf58Q8NAV2 365 aa27.21■■□□□ 1.95
NEDD8-201ENST00000250495 TAF1P21675 1872 aa27.2■■□□□ 1.94
NEDD8-201ENST00000250495 TNIP1Q15025 636 aa27.2■■□□□ 1.94
NEDD8-201ENST00000250495 RTL5Q5HYW3 569 aaPredicted RBP27.2■■□□□ 1.94
NEDD8-201ENST00000250495 CCDC30Q5VVM6 783 aa27.2■■□□□ 1.94
NEDD8-201ENST00000250495 GPRC5DQ9NZD1 345 aa27.2■■□□□ 1.94
NEDD8-201ENST00000250495 LTBP1Q14766 1721 aa27.19■■□□□ 1.94
NEDD8-201ENST00000250495 DDX60Q8IY21 1712 aaKnown RBP27.19■■□□□ 1.94
NEDD8-201ENST00000250495 PCNTO95613 3336 aa27.19■■□□□ 1.94
NEDD8-201ENST00000250495 CIAPIN1Q6FI81 312 aa27.19■■□□□ 1.94
NEDD8-201ENST00000250495 ZBTB38Q8NAP3 1195 aaPredicted RBP27.19■■□□□ 1.94
NEDD8-201ENST00000250495 CELF1Q92879 486 aaKnown RBP27.19■■□□□ 1.94
NEDD8-201ENST00000250495 ADARB2Q9NS39 739 aaKnown RBP27.19■■□□□ 1.94
NEDD8-201ENST00000250495 DDX58O95786 925 aaKnown RBP27.18■■□□□ 1.94
NEDD8-201ENST00000250495 NSFL1CQ9UNZ2 370 aaKnown RBP27.18■■□□□ 1.94
NEDD8-201ENST00000250495 CCDC191Q8NCU4 936 aa27.17■■□□□ 1.94
NEDD8-201ENST00000250495 MYD88Q99836 296 aa27.17■■□□□ 1.94
NEDD8-201ENST00000250495 VEGFBP49765 207 aa27.16■■□□□ 1.94
NEDD8-201ENST00000250495 DEFB115Q30KQ5 88 aa27.16■■□□□ 1.94
NEDD8-201ENST00000250495 BCL2L13Q9BXK5 485 aa27.16■■□□□ 1.94
NEDD8-201ENST00000250495 RAD17O75943 681 aa27.15■■□□□ 1.94
NEDD8-201ENST00000250495 ZEB1P37275 1124 aaPredicted RBP27.15■■□□□ 1.94
NEDD8-201ENST00000250495 GMPSP49915 693 aaPredicted RBP27.15■■□□□ 1.94
NEDD8-201ENST00000250495 RPS8P62241 208 aaKnown RBP27.15■■□□□ 1.94
NEDD8-201ENST00000250495 CCDC27Q2M243 656 aa27.15■■□□□ 1.94
NEDD8-201ENST00000250495 WASHC4Q2M389 1173 aa27.15■■□□□ 1.94
NEDD8-201ENST00000250495 CCDC184Q52MB2 194 aa27.15■■□□□ 1.94
NEDD8-201ENST00000250495 CDHR2Q9BYE9 1310 aa27.15■■□□□ 1.94
NEDD8-201ENST00000250495 RASSF10A6NK89 507 aa27.14■■□□□ 1.94
NEDD8-201ENST00000250495 METTL22Q9BUU2 404 aaPredicted RBP27.14■■□□□ 1.94
NEDD8-201ENST00000250495 C6orf229H3BNL8 230 aa27.13■■□□□ 1.93
NEDD8-201ENST00000250495 TNS4Q8IZW8 715 aa27.13■■□□□ 1.93
NEDD8-201ENST00000250495 CWC25Q9NXE8 425 aaPredicted RBP27.13■■□□□ 1.93
NEDD8-201ENST00000250495 ABT1Q9ULW3 272 aaKnown RBP27.13■■□□□ 1.93
NEDD8-201ENST00000250495 PCCAP05165 728 aaPredicted RBP27.12■■□□□ 1.93
NEDD8-201ENST00000250495 TSPYL6Q8N831 410 aa27.12■■□□□ 1.93
NEDD8-201ENST00000250495 EYA3Q99504 573 aa27.12■■□□□ 1.93
NEDD8-201ENST00000250495 LRRC37AA6NMS7 1700 aa27.12■■□□□ 1.93
NEDD8-201ENST00000250495 GPSM2P81274 684 aa27.11■■□□□ 1.93
NEDD8-201ENST00000250495 YDJCA8MPS7 323 aa27.1■■□□□ 1.93
NEDD8-201ENST00000250495 PDE8AO60658 829 aa27.1■■□□□ 1.93
NEDD8-201ENST00000250495 CCDC152Q4G0S7 254 aa27.1■■□□□ 1.93
NEDD8-201ENST00000250495 WWC1Q8IX03 1113 aa27.1■■□□□ 1.93
NEDD8-201ENST00000250495 STK31Q9BXU1 1019 aa27.1■■□□□ 1.93
NEDD8-201ENST00000250495 POLLQ9UGP5 575 aa27.1■■□□□ 1.93
NEDD8-201ENST00000250495 DUOX1Q9NRD9 1551 aa27.09■■□□□ 1.93
NEDD8-201ENST00000250495 H7C1D1 291 aa27.09■■□□□ 1.93
NEDD8-201ENST00000250495 RIMBP2O15034 1052 aa27.09■■□□□ 1.93
NEDD8-201ENST00000250495 NCBP3Q53F19 620 aaKnown RBP27.09■■□□□ 1.93
NEDD8-201ENST00000250495 KSR2Q6VAB6 950 aa27.09■■□□□ 1.93
NEDD8-201ENST00000250495 ZC3H15Q8WU90 426 aaKnown RBP27.09■■□□□ 1.93
NEDD8-201ENST00000250495 TSR2Q969E8 191 aaKnown RBP27.09■■□□□ 1.93
NEDD8-201ENST00000250495 CNOT7Q9UIV1 285 aaKnown RBP27.09■■□□□ 1.93
NEDD8-201ENST00000250495 MAP3K2Q9Y2U5 619 aa27.09■■□□□ 1.93
NEDD8-201ENST00000250495 AIDAQ96BJ3 306 aa27.08■■□□□ 1.93
NEDD8-201ENST00000250495 SEC31BQ9NQW1 1179 aa27.08■■□□□ 1.93
NEDD8-201ENST00000250495 PGAP2Q9UHJ9 254 aa27.08■■□□□ 1.93
NEDD8-201ENST00000250495 FMR1Q06787 632 aaKnown RBP eCLIP27.07■■□□□ 1.92
NEDD8-201ENST00000250495 TBC1D16Q8TBP0 767 aa27.07■■□□□ 1.92
NEDD8-201ENST00000250495 DPF2Q92785 391 aa27.07■■□□□ 1.92
NEDD8-201ENST00000250495 ZC3H12CQ9C0D7 883 aaKnown RBP27.07■■□□□ 1.92
NEDD8-201ENST00000250495 DBNDD1Q9H9R9 158 aa27.07■■□□□ 1.92
NEDD8-201ENST00000250495 WDR33Q9C0J8 1336 aaKnown RBP27.07■■□□□ 1.92
NEDD8-201ENST00000250495 PI4KAP2A4QPH2 592 aa27.06■■□□□ 1.92
NEDD8-201ENST00000250495 TRAF5O00463 557 aa27.06■■□□□ 1.92
NEDD8-201ENST00000250495 NEXNQ0ZGT2 675 aa27.06■■□□□ 1.92
NEDD8-201ENST00000250495 TWISTNBQ3B726 338 aaPredicted RBP27.06■■□□□ 1.92
NEDD8-201ENST00000250495 PI4KAP1Q8N8J0 262 aa27.06■■□□□ 1.92
NEDD8-201ENST00000250495 MRS2Q9HD23 443 aa27.06■■□□□ 1.92
NEDD8-201ENST00000250495 PODXL2Q9NZ53 605 aa27.06■■□□□ 1.92
NEDD8-201ENST00000250495 IL16Q14005 1332 aa27.06■■□□□ 1.92
NEDD8-201ENST00000250495 FOXN1O15353 648 aa27.05■■□□□ 1.92
NEDD8-201ENST00000250495 ANP32CO43423 234 aa27.05■■□□□ 1.92
NEDD8-201ENST00000250495 CST9Q5W186 159 aa27.05■■□□□ 1.92
NEDD8-201ENST00000250495 JARID2Q92833 1246 aaPredicted RBP27.05■■□□□ 1.92
NEDD8-201ENST00000250495 ANKIB1Q9P2G1 1089 aa27.05■■□□□ 1.92
NEDD8-201ENST00000250495 TRPM7Q96QT4 1865 aa27.04■■□□□ 1.92
NEDD8-201ENST00000250495 PSMD14O00487 310 aa27.04■■□□□ 1.92
NEDD8-201ENST00000250495 HIRAP54198 1017 aaPredicted RBP27.04■■□□□ 1.92
NEDD8-201ENST00000250495 WBP1LQ9NX94 342 aa27.04■■□□□ 1.92
NEDD8-201ENST00000250495 ZBTB12Q9Y330 459 aaPredicted RBP27.04■■□□□ 1.92
NEDD8-201ENST00000250495 ECE2O60344 883 aa27.03■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 260.5 ms