RNA–Protein interactions for RNA: ENST00000231524.13

TRIM23-201, Transcript of tripartite motif containing 23, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM23, Length 4,186 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-201ENST00000231524 HSP90AB2PQ58FF8 381 aa11.32□□□□□ -0.6
TRIM23-201ENST00000231524 ANKRD20A12PQ8NF67 263 aa11.32□□□□□ -0.6
TRIM23-201ENST00000231524 PI4KAP2A4QPH2 592 aa11.31□□□□□ -0.6
TRIM23-201ENST00000231524 TTC31Q49AM3 519 aaPredicted RBP11.31□□□□□ -0.6
TRIM23-201ENST00000231524 PI4KAP1Q8N8J0 262 aa11.31□□□□□ -0.6
TRIM23-201ENST00000231524 OSBPL3Q9H4L5 887 aa11.31□□□□□ -0.6
TRIM23-201ENST00000231524 SMC1AQ14683 1233 aaKnown RBP11.31□□□□□ -0.6
TRIM23-201ENST00000231524 TAF7LQ5H9L4 462 aa11.31□□□□□ -0.6
TRIM23-201ENST00000231524 C1orf141Q5JVX7 400 aa11.31□□□□□ -0.6
TRIM23-201ENST00000231524 TMEM87AQ8NBN3 555 aa11.31□□□□□ -0.6
TRIM23-201ENST00000231524 MRPS27Q92552 414 aaKnown RBP11.31□□□□□ -0.6
TRIM23-201ENST00000231524 PCMTD1Q96MG8 357 aaPredicted RBP11.31□□□□□ -0.6
TRIM23-201ENST00000231524 RNF216Q9NWF9 866 aaPredicted RBP11.31□□□□□ -0.6
TRIM23-201ENST00000231524 A0A1B0GVL5 298 aa11.31□□□□□ -0.6
TRIM23-201ENST00000231524 LARGE1O95461 756 aa11.31□□□□□ -0.6
TRIM23-201ENST00000231524 IL13P35225 146 aa11.31□□□□□ -0.6
TRIM23-201ENST00000231524 NMIQ13287 307 aaPredicted RBP11.31□□□□□ -0.6
TRIM23-201ENST00000231524 FILIP1LQ4L180 1135 aa11.31□□□□□ -0.6
TRIM23-201ENST00000231524 DNAAF4Q8WXU2 420 aa11.31□□□□□ -0.6
TRIM23-201ENST00000231524 GBP3Q9H0R5 595 aa11.31□□□□□ -0.6
TRIM23-201ENST00000231524 KDM5AP29375 1690 aaKnown RBP11.31□□□□□ -0.6
TRIM23-201ENST00000231524 GNAT3A8MTJ3 354 aa11.31□□□□□ -0.6
TRIM23-201ENST00000231524 CTIFO43310 598 aaKnown RBP11.31□□□□□ -0.6
TRIM23-201ENST00000231524 MNAT1P51948 309 aa11.31□□□□□ -0.6
TRIM23-201ENST00000231524 TDRD7Q8NHU6 1098 aaKnown RBP11.31□□□□□ -0.6
TRIM23-201ENST00000231524 C8orf76Q96K31 380 aa11.31□□□□□ -0.6
TRIM23-201ENST00000231524 HYPKQ9NX55 129 aa11.31□□□□□ -0.6
TRIM23-201ENST00000231524 PUF60Q9UHX1 559 aaKnown RBP11.31□□□□□ -0.6
TRIM23-201ENST00000231524 CHL1O00533 1208 aa11.3□□□□□ -0.6
TRIM23-201ENST00000231524 TUBB4AP04350 444 aa11.3□□□□□ -0.6
TRIM23-201ENST00000231524 KARSQ15046 597 aaKnown RBP11.3□□□□□ -0.6
TRIM23-201ENST00000231524 Q6ZUG5 572 aa11.3□□□□□ -0.6
TRIM23-201ENST00000231524 PA2G4Q9UQ80 394 aaKnown RBP11.3□□□□□ -0.6
TRIM23-201ENST00000231524 EPB41L2O43491 1005 aaKnown RBP11.3□□□□□ -0.6
TRIM23-201ENST00000231524 JAK2O60674 1132 aa11.3□□□□□ -0.6
TRIM23-201ENST00000231524 SLFN14P0C7P3 912 aa11.3□□□□□ -0.6
TRIM23-201ENST00000231524 SAFBQ15424 915 aaKnown RBP eCLIP11.3□□□□□ -0.6
TRIM23-201ENST00000231524 ADCK5Q3MIX3 580 aa11.3□□□□□ -0.6
TRIM23-201ENST00000231524 SMARCE1Q969G3 411 aa11.3□□□□□ -0.6
TRIM23-201ENST00000231524 CRACR2AQ9BSW2 395 aa11.3□□□□□ -0.6
TRIM23-201ENST00000231524 KIAA0754O94854 1291 aa11.3□□□□□ -0.6
TRIM23-201ENST00000231524 SEC31AO94979 1220 aaKnown RBP11.3□□□□□ -0.6
TRIM23-201ENST00000231524 USP8P40818 1118 aa11.3□□□□□ -0.6
TRIM23-201ENST00000231524 PTH1RQ03431 593 aa11.3□□□□□ -0.6
TRIM23-201ENST00000231524 CTR9Q6PD62 1173 aa11.3□□□□□ -0.6
TRIM23-201ENST00000231524 DRC1Q96MC2 740 aa11.3□□□□□ -0.6
TRIM23-201ENST00000231524 TMEM51Q9NW97 253 aa11.3□□□□□ -0.6
TRIM23-201ENST00000231524 USP27XA6NNY8 438 aa11.29□□□□□ -0.6
TRIM23-201ENST00000231524 CLCN6P51797 869 aa11.29□□□□□ -0.6
TRIM23-201ENST00000231524 GOLGA1Q92805 767 aa11.29□□□□□ -0.6
TRIM23-201ENST00000231524 SMARCC1Q92922 1105 aaPredicted RBP11.29□□□□□ -0.6
TRIM23-201ENST00000231524 TPCN1Q9ULQ1 816 aa11.29□□□□□ -0.6
TRIM23-201ENST00000231524 EIF4A2Q14240 407 aaKnown RBP11.29□□□□□ -0.6
TRIM23-201ENST00000231524 CCDC144BQ3MJ40 725 aa11.29□□□□□ -0.6
TRIM23-201ENST00000231524 CCDC144CPQ8IYA2 1237 aa11.29□□□□□ -0.6
TRIM23-201ENST00000231524 MRFAP1L1Q96HT8 127 aa11.29□□□□□ -0.6
TRIM23-201ENST00000231524 XPO4Q9C0E2 1151 aaKnown RBP11.29□□□□□ -0.6
TRIM23-201ENST00000231524 GOLGA6L9A6NEM1 432 aa11.29□□□□□ -0.6
TRIM23-201ENST00000231524 KLHL10Q6JEL2 608 aa11.29□□□□□ -0.6
TRIM23-201ENST00000231524 RAB11FIP4Q86YS3 637 aa11.29□□□□□ -0.6
TRIM23-201ENST00000231524 MICALL1Q8N3F8 863 aa11.29□□□□□ -0.6
TRIM23-201ENST00000231524 CENPHQ9H3R5 247 aa11.29□□□□□ -0.6
TRIM23-201ENST00000231524 ZFYVE16Q7Z3T8 1539 aa11.29□□□□□ -0.6
TRIM23-201ENST00000231524 KIF24Q5T7B8 1368 aa11.28□□□□□ -0.6
TRIM23-201ENST00000231524 AK9Q5TCS8 1911 aa11.28□□□□□ -0.6
TRIM23-201ENST00000231524 FAM160A1Q05DH4 1040 aa11.28□□□□□ -0.6
TRIM23-201ENST00000231524 PPP2R3AQ06190 1150 aa11.28□□□□□ -0.6
TRIM23-201ENST00000231524 HSP90AB3PQ58FF7 597 aa11.28□□□□□ -0.6
TRIM23-201ENST00000231524 FAM227BQ96M60 508 aa11.28□□□□□ -0.6
TRIM23-201ENST00000231524 SBNO2Q9Y2G9 1366 aa11.28□□□□□ -0.6
TRIM23-201ENST00000231524 A0A1B0GUL7 405 aa11.28□□□□□ -0.6
TRIM23-201ENST00000231524 ETF1P62495 437 aaKnown RBP11.28□□□□□ -0.6
TRIM23-201ENST00000231524 PATL2C9JE40 543 aaKnown RBP11.28□□□□□ -0.6
TRIM23-201ENST00000231524 PNMA6AP0CW24 399 aaPredicted RBP11.28□□□□□ -0.6
TRIM23-201ENST00000231524 NLRP2Q9NX02 1062 aa11.28□□□□□ -0.6
TRIM23-201ENST00000231524 RAI14Q9P0K7 980 aa11.28□□□□□ -0.6
TRIM23-201ENST00000231524 RHOXF2BP0C7M4 288 aa11.28□□□□□ -0.6
TRIM23-201ENST00000231524 C11orf57Q6ZUT1 292 aaPredicted RBP11.28□□□□□ -0.6
TRIM23-201ENST00000231524 RHOXF2Q9BQY4 288 aa11.28□□□□□ -0.6
TRIM23-201ENST00000231524 LZTFL1Q9NQ48 299 aa11.28□□□□□ -0.6
TRIM23-201ENST00000231524 HMG20BQ9P0W2 317 aa11.28□□□□□ -0.6
TRIM23-201ENST00000231524 TULP1O00294 542 aaPredicted RBP11.27□□□□□ -0.6
TRIM23-201ENST00000231524 MARCKSP29966 332 aaPredicted RBP11.27□□□□□ -0.6
TRIM23-201ENST00000231524 LRRFIP1Q32MZ4 808 aaKnown RBP11.27□□□□□ -0.6
TRIM23-201ENST00000231524 SLC27A2O14975 620 aa11.27□□□□□ -0.61
TRIM23-201ENST00000231524 CNNM3Q8NE01 707 aa11.27□□□□□ -0.61
TRIM23-201ENST00000231524 ZCCHC17Q9NP64 241 aaKnown RBP11.27□□□□□ -0.61
TRIM23-201ENST00000231524 U3KPZ7 1027 aaPredicted RBP11.27□□□□□ -0.61
TRIM23-201ENST00000231524 SSH2Q76I76 1423 aa11.27□□□□□ -0.61
TRIM23-201ENST00000231524 DHX37Q8IY37 1157 aaKnown RBP11.27□□□□□ -0.61
TRIM23-201ENST00000231524 LSG1Q9H089 658 aaKnown RBP11.27□□□□□ -0.61
TRIM23-201ENST00000231524 PHAXQ9H814 394 aaKnown RBP11.27□□□□□ -0.61
TRIM23-201ENST00000231524 DACH1Q9UI36 760 aa11.27□□□□□ -0.61
TRIM23-201ENST00000231524 AP5Z1O43299 807 aa11.26□□□□□ -0.61
TRIM23-201ENST00000231524 MTHFSDQ2M296 383 aaKnown RBP11.26□□□□□ -0.61
TRIM23-201ENST00000231524 ACEP12821 1306 aa11.26□□□□□ -0.61
TRIM23-201ENST00000231524 FAM135BQ49AJ0 1406 aa11.26□□□□□ -0.61
TRIM23-201ENST00000231524 RPS6KB1P23443 525 aa11.26□□□□□ -0.61
TRIM23-201ENST00000231524 SYKP43405 635 aa11.26□□□□□ -0.61
TRIM23-201ENST00000231524 RAD51AP2Q09MP3 1159 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms