RNA–Protein interactions for RNA: ENST00000636212.1

CLN6-213, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-213ENST00000636212 A8MVM7 634 aa16.74■□□□□ 0.27
CLN6-213ENST00000636212 HMGB1P1B2RPK0 211 aaPredicted RBP16.74■□□□□ 0.27
CLN6-213ENST00000636212 RAD51DO75771 328 aa16.74■□□□□ 0.27
CLN6-213ENST00000636212 PGM3O95394 542 aa16.74■□□□□ 0.27
CLN6-213ENST00000636212 IMPDH2P12268 514 aa16.74■□□□□ 0.27
CLN6-213ENST00000636212 H3F3AP84243 136 aa16.74■□□□□ 0.27
CLN6-213ENST00000636212 BSPH1Q075Z2 132 aa16.74■□□□□ 0.27
CLN6-213ENST00000636212 FAPQ12884 760 aa16.74■□□□□ 0.27
CLN6-213ENST00000636212 KLHL17Q6TDP4 642 aa16.74■□□□□ 0.27
CLN6-213ENST00000636212 KRT73Q86Y46 540 aa16.74■□□□□ 0.27
CLN6-213ENST00000636212 GTPBP3Q969Y2 492 aaKnown RBP16.74■□□□□ 0.27
CLN6-213ENST00000636212 SPDL1Q96EA4 605 aa16.74■□□□□ 0.27
CLN6-213ENST00000636212 RABEP2Q9H5N1 569 aa16.74■□□□□ 0.27
CLN6-213ENST00000636212 FAIMQ9NVQ4 179 aa16.74■□□□□ 0.27
CLN6-213ENST00000636212 TMEM45AQ9NWC5 275 aa16.74■□□□□ 0.27
CLN6-213ENST00000636212 RPS6KB2Q9UBS0 482 aa16.74■□□□□ 0.27
CLN6-213ENST00000636212 CORO2BQ9UQ03 480 aa16.74■□□□□ 0.27
CLN6-213ENST00000636212 RAI1Q7Z5J4 1906 aaPredicted RBP16.74■□□□□ 0.27
CLN6-213ENST00000636212 ZC3H12DA2A288 527 aaKnown RBP16.73■□□□□ 0.27
CLN6-213ENST00000636212 PAX1P15863 534 aa16.73■□□□□ 0.27
CLN6-213ENST00000636212 EDNRAP25101 427 aa16.73■□□□□ 0.27
CLN6-213ENST00000636212 ACAA2P42765 397 aaKnown RBP16.73■□□□□ 0.27
CLN6-213ENST00000636212 ATP5J2P56134 94 aa16.73■□□□□ 0.27
CLN6-213ENST00000636212 TGFBR3Q03167 851 aa16.73■□□□□ 0.27
CLN6-213ENST00000636212 CEACAM7Q14002 265 aa16.73■□□□□ 0.27
CLN6-213ENST00000636212 OR7A5Q15622 319 aa16.73■□□□□ 0.27
CLN6-213ENST00000636212 ZNF672Q499Z4 452 aaPredicted RBP16.73■□□□□ 0.27
CLN6-213ENST00000636212 TTMPQ5BVD1 217 aa16.73■□□□□ 0.27
CLN6-213ENST00000636212 TMEM225Q6GV28 225 aa16.73■□□□□ 0.27
CLN6-213ENST00000636212 BLOC1S3Q6QNY0 202 aa16.73■□□□□ 0.27
CLN6-213ENST00000636212 TMEM108Q6UXF1 575 aa16.73■□□□□ 0.27
CLN6-213ENST00000636212 CLEC9AQ6UXN8 241 aa16.73■□□□□ 0.27
CLN6-213ENST00000636212 CLIP4Q8N3C7 705 aa16.73■□□□□ 0.27
CLN6-213ENST00000636212 SMAP2Q8WU79 429 aaPredicted RBP16.73■□□□□ 0.27
CLN6-213ENST00000636212 SLC35B4Q969S0 331 aa16.73■□□□□ 0.27
CLN6-213ENST00000636212 RADILQ96JH8 1075 aa16.73■□□□□ 0.27
CLN6-213ENST00000636212 EBF4Q9BQW3 602 aa16.73■□□□□ 0.27
CLN6-213ENST00000636212 SPATA5L1Q9BVQ7 753 aa16.73■□□□□ 0.27
CLN6-213ENST00000636212 SF3B5Q9BWJ5 86 aaKnown RBP16.73■□□□□ 0.27
CLN6-213ENST00000636212 ALG2Q9H553 416 aa16.73■□□□□ 0.27
CLN6-213ENST00000636212 BCL2L10Q9HD36 194 aa16.73■□□□□ 0.27
CLN6-213ENST00000636212 MALT1Q9UDY8 824 aa16.73■□□□□ 0.27
CLN6-213ENST00000636212 MGAT4BQ9UQ53 548 aa16.73■□□□□ 0.27
CLN6-213ENST00000636212 FLVCR1Q9Y5Y0 555 aa16.73■□□□□ 0.27
CLN6-213ENST00000636212 DSCAMO60469 2012 aa16.73■□□□□ 0.27
CLN6-213ENST00000636212 C2CD3Q4AC94 2353 aa16.72■□□□□ 0.27
CLN6-213ENST00000636212 LIPT2A6NK58 231 aa16.72■□□□□ 0.27
CLN6-213ENST00000636212 EVPLLA8MZ36 301 aa16.72■□□□□ 0.27
CLN6-213ENST00000636212 ETS2P15036 469 aa16.72■□□□□ 0.27
CLN6-213ENST00000636212 GTF2E2P29084 291 aaKnown RBP16.72■□□□□ 0.27
CLN6-213ENST00000636212 ATP4BP51164 291 aa16.72■□□□□ 0.27
CLN6-213ENST00000636212 SQLEQ14534 574 aa16.72■□□□□ 0.27
CLN6-213ENST00000636212 SLC17A1Q14916 467 aa16.72■□□□□ 0.27
CLN6-213ENST00000636212 AGKQ53H12 422 aa16.72■□□□□ 0.27
CLN6-213ENST00000636212 LRIF1Q5T3J3 769 aa16.72■□□□□ 0.27
CLN6-213ENST00000636212 GCNT6Q5T4J0 391 aa16.72■□□□□ 0.27
CLN6-213ENST00000636212 ABHD12BQ7Z5M8 362 aaPredicted RBP16.72■□□□□ 0.27
CLN6-213ENST00000636212 DEPDC4Q8N2C3 294 aa16.72■□□□□ 0.27
CLN6-213ENST00000636212 PIF1Q9H611 641 aa16.72■□□□□ 0.27
CLN6-213ENST00000636212 ZNF701Q9NV72 531 aaPredicted RBP16.72■□□□□ 0.27
CLN6-213ENST00000636212 DPRXA6NFQ7 191 aa16.71■□□□□ 0.27
CLN6-213ENST00000636212 H7C1Q1 480 aa16.71■□□□□ 0.27
CLN6-213ENST00000636212 RAMP1O60894 148 aa16.71■□□□□ 0.27
CLN6-213ENST00000636212 KRT33AO76009 404 aa16.71■□□□□ 0.27
CLN6-213ENST00000636212 AKR7A3O95154 331 aa16.71■□□□□ 0.27
CLN6-213ENST00000636212 VAMP5O95183 116 aa16.71■□□□□ 0.27
CLN6-213ENST00000636212 AHSA1O95433 338 aa16.71■□□□□ 0.27
CLN6-213ENST00000636212 NUDT7P0C024 238 aa16.71■□□□□ 0.27
CLN6-213ENST00000636212 BMP2P12643 396 aa16.71■□□□□ 0.27
CLN6-213ENST00000636212 C1orf140Q5VVS0 124 aa16.71■□□□□ 0.27
CLN6-213ENST00000636212 AAED1Q7RTV5 226 aa16.71■□□□□ 0.27
CLN6-213ENST00000636212 SERPINA11Q86U17 422 aa16.71■□□□□ 0.27
CLN6-213ENST00000636212 GPAT4Q86UL3 456 aa16.71■□□□□ 0.27
CLN6-213ENST00000636212 TMEM99Q8N816 258 aa16.71■□□□□ 0.27
CLN6-213ENST00000636212 KBTBD8Q8NFY9 601 aa16.71■□□□□ 0.27
CLN6-213ENST00000636212 OR52N5Q8NH56 324 aa16.71■□□□□ 0.27
CLN6-213ENST00000636212 IGFBPL1Q8WX77 278 aa16.71■□□□□ 0.27
CLN6-213ENST00000636212 MAL2Q969L2 176 aa16.71■□□□□ 0.27
CLN6-213ENST00000636212 TMEM45BQ96B21 275 aa16.71■□□□□ 0.27
CLN6-213ENST00000636212 COX4I2Q96KJ9 171 aa16.71■□□□□ 0.27
CLN6-213ENST00000636212 VIPAS39Q9H9C1 493 aa16.71■□□□□ 0.27
CLN6-213ENST00000636212 ADPRHL2Q9NX46 363 aa16.71■□□□□ 0.27
CLN6-213ENST00000636212 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.71■□□□□ 0.27
CLN6-213ENST00000636212 DCTN4Q9UJW0 460 aa16.71■□□□□ 0.27
CLN6-213ENST00000636212 POU2F3Q9UKI9 436 aa16.71■□□□□ 0.27
CLN6-213ENST00000636212 AQP7P3A6NL99 342 aa16.7■□□□□ 0.26
CLN6-213ENST00000636212 ELOA3DA6NLF2 546 aaPredicted RBP16.7■□□□□ 0.26
CLN6-213ENST00000636212 ABCD4O14678 606 aa16.7■□□□□ 0.26
CLN6-213ENST00000636212 SMAD7O15105 426 aaKnown RBP16.7■□□□□ 0.26
CLN6-213ENST00000636212 PRG2P13727 222 aa16.7■□□□□ 0.26
CLN6-213ENST00000636212 PRKAR1BP31321 381 aa16.7■□□□□ 0.26
CLN6-213ENST00000636212 CDH11P55287 796 aa16.7■□□□□ 0.26
CLN6-213ENST00000636212 NCALDP61601 193 aa16.7■□□□□ 0.26
CLN6-213ENST00000636212 BNIP2Q12982 314 aa16.7■□□□□ 0.26
CLN6-213ENST00000636212 ELOA3BQ3SY89 546 aa16.7■□□□□ 0.26
CLN6-213ENST00000636212 REEP3Q6NUK4 255 aa16.7■□□□□ 0.26
CLN6-213ENST00000636212 KLHL24Q6TFL4 600 aa16.7■□□□□ 0.26
CLN6-213ENST00000636212 FUNDC1Q8IVP5 155 aa16.7■□□□□ 0.26
CLN6-213ENST00000636212 PIAS4Q8N2W9 510 aaPredicted RBP16.7■□□□□ 0.26
CLN6-213ENST00000636212 POMGNT2Q8NAT1 580 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms