RNA–Protein interactions for RNA: ENST00000613547.4

MDC1-209, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 5 BASIC

Gene MDC1, Length 830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-209ENST00000613547 ZNF629Q9UEG4 869 aaPredicted RBP11.88□□□□□ -0.51
MDC1-209ENST00000613547 Q9UFV3 132 aa11.88□□□□□ -0.51
MDC1-209ENST00000613547 SLC7A7Q9UM01 511 aa11.88□□□□□ -0.51
MDC1-209ENST00000613547 EMC9Q9Y3B6 208 aa11.88□□□□□ -0.51
MDC1-209ENST00000613547 DOPEY1Q5JWR5 2465 aa11.88□□□□□ -0.51
MDC1-209ENST00000613547 HIVEP3Q5T1R4 2406 aa11.88□□□□□ -0.51
MDC1-209ENST00000613547 TENM4Q6N022 2769 aa11.87□□□□□ -0.51
MDC1-209ENST00000613547 ZC3H12DA2A288 527 aaKnown RBP11.87□□□□□ -0.51
MDC1-209ENST00000613547 KDM4EB2RXH2 506 aaPredicted RBP11.87□□□□□ -0.51
MDC1-209ENST00000613547 CLDN14O95500 239 aa11.87□□□□□ -0.51
MDC1-209ENST00000613547 CTBP2P56545 445 aa11.87□□□□□ -0.51
MDC1-209ENST00000613547 ST3GAL3Q11203 375 aa11.87□□□□□ -0.51
MDC1-209ENST00000613547 TRAP1Q12931 704 aaKnown RBP11.87□□□□□ -0.51
MDC1-209ENST00000613547 MFSD13AQ14CX5 517 aa11.87□□□□□ -0.51
MDC1-209ENST00000613547 SLC25A35Q3KQZ1 300 aa11.87□□□□□ -0.51
MDC1-209ENST00000613547 FAM69AQ5T7M9 428 aa11.87□□□□□ -0.51
MDC1-209ENST00000613547 LCN8Q6JVE9 175 aa11.87□□□□□ -0.51
MDC1-209ENST00000613547 TTC33Q6PID6 262 aaPredicted RBP11.87□□□□□ -0.51
MDC1-209ENST00000613547 PLXDC2Q6UX71 529 aa11.87□□□□□ -0.51
MDC1-209ENST00000613547 CYP2R1Q6VVX0 501 aa11.87□□□□□ -0.51
MDC1-209ENST00000613547 GCNT2Q8N0V5 402 aa11.87□□□□□ -0.51
MDC1-209ENST00000613547 RNF128Q8TEB7 428 aa11.87□□□□□ -0.51
MDC1-209ENST00000613547 GMPPAQ96IJ6 420 aaPredicted RBP11.87□□□□□ -0.51
MDC1-209ENST00000613547 CLPTM1LQ96KA5 538 aa11.87□□□□□ -0.51
MDC1-209ENST00000613547 NAA11Q9BSU3 229 aaPredicted RBP11.87□□□□□ -0.51
MDC1-209ENST00000613547 TMEM43Q9BTV4 400 aa11.87□□□□□ -0.51
MDC1-209ENST00000613547 FNDC11Q9BVV2 318 aa11.87□□□□□ -0.51
MDC1-209ENST00000613547 GP6Q9HCN6 339 aa11.87□□□□□ -0.51
MDC1-209ENST00000613547 KLHL9Q9P2J3 617 aa11.87□□□□□ -0.51
MDC1-209ENST00000613547 RIMS3Q9UJD0 308 aa11.87□□□□□ -0.51
MDC1-209ENST00000613547 V9GYQ6 96 aa11.87□□□□□ -0.51
MDC1-209ENST00000613547 TRAV36DV7A0A075B6V5 113 aa11.86□□□□□ -0.51
MDC1-209ENST00000613547 LIPT2A6NK58 231 aa11.86□□□□□ -0.51
MDC1-209ENST00000613547 SMAD9O15198 467 aaKnown RBP11.86□□□□□ -0.51
MDC1-209ENST00000613547 GSC2O15499 205 aa11.86□□□□□ -0.51
MDC1-209ENST00000613547 NPIPB7O75200 414 aa11.86□□□□□ -0.51
MDC1-209ENST00000613547 AQP8O94778 261 aa11.86□□□□□ -0.51
MDC1-209ENST00000613547 IL18BPO95998 194 aa11.86□□□□□ -0.51
MDC1-209ENST00000613547 IMPDH2P12268 514 aa11.86□□□□□ -0.51
MDC1-209ENST00000613547 FPR1P21462 350 aa11.86□□□□□ -0.51
MDC1-209ENST00000613547 BMP5P22003 454 aa11.86□□□□□ -0.51
MDC1-209ENST00000613547 RBM34P42696 430 aaKnown RBP11.86□□□□□ -0.51
MDC1-209ENST00000613547 RPS5P46782 204 aaKnown RBP11.86□□□□□ -0.51
MDC1-209ENST00000613547 AGFG1P52594 562 aaKnown RBP11.86□□□□□ -0.51
MDC1-209ENST00000613547 PIN1Q13526 163 aaPredicted RBP11.86□□□□□ -0.51
MDC1-209ENST00000613547 OR7A5Q15622 319 aa11.86□□□□□ -0.51
MDC1-209ENST00000613547 FAM214BQ7L5A3 538 aa11.86□□□□□ -0.51
MDC1-209ENST00000613547 GDF7Q7Z4P5 450 aa11.86□□□□□ -0.51
MDC1-209ENST00000613547 C10orf53Q8N6V4 93 aa11.86□□□□□ -0.51
MDC1-209ENST00000613547 CNEP1R1Q8N9A8 125 aa11.86□□□□□ -0.51
MDC1-209ENST00000613547 NAXEQ8NCW5 288 aa11.86□□□□□ -0.51
MDC1-209ENST00000613547 OR6S1Q8NH40 331 aa11.86□□□□□ -0.51
MDC1-209ENST00000613547 LILRB4Q8NHJ6 448 aa11.86□□□□□ -0.51
MDC1-209ENST00000613547 MFSD8Q8NHS3 518 aa11.86□□□□□ -0.51
MDC1-209ENST00000613547 PIGXQ8TBF5 258 aa11.86□□□□□ -0.51
MDC1-209ENST00000613547 ROBO4Q8WZ75 1007 aa11.86□□□□□ -0.51
MDC1-209ENST00000613547 SLC25A36Q96CQ1 311 aa11.86□□□□□ -0.51
MDC1-209ENST00000613547 DNAJA3Q96EY1 480 aa11.86□□□□□ -0.51
MDC1-209ENST00000613547 LRRC46Q96FV0 321 aa11.86□□□□□ -0.51
MDC1-209ENST00000613547 HS6ST2Q96MM7 605 aa11.86□□□□□ -0.51
MDC1-209ENST00000613547 SLC19A3Q9BZV2 496 aa11.86□□□□□ -0.51
MDC1-209ENST00000613547 AMBRA1Q9C0C7 1298 aa11.86□□□□□ -0.51
MDC1-209ENST00000613547 KLHL4Q9C0H6 718 aa11.86□□□□□ -0.51
MDC1-209ENST00000613547 LRMDAQ9H2I8 198 aa11.86□□□□□ -0.51
MDC1-209ENST00000613547 KCNJ16Q9NPI9 418 aa11.86□□□□□ -0.51
MDC1-209ENST00000613547 EMC3Q9P0I2 261 aa11.86□□□□□ -0.51
MDC1-209ENST00000613547 C6orf203Q9P0P8 240 aaPredicted RBP11.86□□□□□ -0.51
MDC1-209ENST00000613547 ENPP4Q9Y6X5 453 aa11.86□□□□□ -0.51
MDC1-209ENST00000613547 MED12Q93074 2177 aa11.86□□□□□ -0.51
MDC1-209ENST00000613547 IGKV1D-42A0A075B6H8 117 aa11.85□□□□□ -0.51
MDC1-209ENST00000613547 IGHV3-15A0A0B4J1V0 119 aa11.85□□□□□ -0.51
MDC1-209ENST00000613547 A0A1W2PNV4 684 aa11.85□□□□□ -0.51
MDC1-209ENST00000613547 FAM90A27PA6NNH2 459 aa11.85□□□□□ -0.51
MDC1-209ENST00000613547 SS18L1O75177 396 aaPredicted RBP11.85□□□□□ -0.51
MDC1-209ENST00000613547 ATP6V1B2P21281 511 aa11.85□□□□□ -0.51
MDC1-209ENST00000613547 YAP1P46937 504 aaKnown RBP11.85□□□□□ -0.51
MDC1-209ENST00000613547 SIRPAP78324 504 aa11.85□□□□□ -0.51
MDC1-209ENST00000613547 MS4A2Q01362 244 aa11.85□□□□□ -0.51
MDC1-209ENST00000613547 EGR4Q05215 589 aa11.85□□□□□ -0.51
MDC1-209ENST00000613547 RASGEF1BQ0VAM2 473 aa11.85□□□□□ -0.51
MDC1-209ENST00000613547 FLOT2Q14254 428 aa11.85□□□□□ -0.51
MDC1-209ENST00000613547 TMEM201Q5SNT2 666 aa11.85□□□□□ -0.51
MDC1-209ENST00000613547 PGM2L1Q6PCE3 622 aa11.85□□□□□ -0.51
MDC1-209ENST00000613547 PAQR6Q6TCH4 344 aa11.85□□□□□ -0.51
MDC1-209ENST00000613547 OFCC1Q8IZS5 231 aa11.85□□□□□ -0.51
MDC1-209ENST00000613547 FAM86B1Q8N7N1 296 aa11.85□□□□□ -0.51
MDC1-209ENST00000613547 ABHD3Q8WU67 409 aa11.85□□□□□ -0.51
MDC1-209ENST00000613547 KTI12Q96EK9 354 aaPredicted RBP11.85□□□□□ -0.51
MDC1-209ENST00000613547 CADM1Q9BY67 442 aaKnown RBP11.85□□□□□ -0.51
MDC1-209ENST00000613547 PIGMQ9H3S5 423 aa11.85□□□□□ -0.51
MDC1-209ENST00000613547 FREM3P0C091 2139 aa11.84□□□□□ -0.51
MDC1-209ENST00000613547 GTF3C1Q12789 2109 aa11.84□□□□□ -0.51
MDC1-209ENST00000613547 HTR3EA5X5Y0 456 aa11.84□□□□□ -0.51
MDC1-209ENST00000613547 EEF1E1-BLOC1S5C9J1V9 151 aa11.84□□□□□ -0.51
MDC1-209ENST00000613547 hCG_2039718K7EN88 272 aa11.84□□□□□ -0.51
MDC1-209ENST00000613547 GPR171O14626 319 aa11.84□□□□□ -0.51
MDC1-209ENST00000613547 EEF1E1O43324 174 aaKnown RBP11.84□□□□□ -0.51
MDC1-209ENST00000613547 CYTIPO60759 359 aa11.84□□□□□ -0.51
MDC1-209ENST00000613547 VAMP5O95183 116 aa11.84□□□□□ -0.51
MDC1-209ENST00000613547 MT-ATP6P00846 226 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms