RNA–Protein interactions for RNA: ENST00000612856.4

FAM3A-221, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 3,995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-221ENST00000612856 SQSTM1Q13501 440 aa10.04□□□□□ -0.8
FAM3A-221ENST00000612856 ABHD17CQ6PCB6 329 aa10.04□□□□□ -0.8
FAM3A-221ENST00000612856 ZCCHC12Q6PEW1 402 aa10.04□□□□□ -0.8
FAM3A-221ENST00000612856 MOSPD2Q8NHP6 518 aa10.04□□□□□ -0.8
FAM3A-221ENST00000612856 LHFPL5Q8TAF8 219 aa10.04□□□□□ -0.8
FAM3A-221ENST00000612856 FAM174AQ8TBP5 190 aa10.04□□□□□ -0.8
FAM3A-221ENST00000612856 C2CD4CQ8TF44 421 aa10.04□□□□□ -0.8
FAM3A-221ENST00000612856 MND1Q9BWT6 205 aa10.04□□□□□ -0.8
FAM3A-221ENST00000612856 GSX2Q9BZM3 304 aa10.04□□□□□ -0.8
FAM3A-221ENST00000612856 DPAGT1Q9H3H5 408 aa10.04□□□□□ -0.8
FAM3A-221ENST00000612856 LRRN3Q9H3W5 708 aa10.04□□□□□ -0.8
FAM3A-221ENST00000612856 PELI2Q9HAT8 420 aa10.04□□□□□ -0.8
FAM3A-221ENST00000612856 ZNF160Q9HCG1 818 aa10.04□□□□□ -0.8
FAM3A-221ENST00000612856 EPHA6Q9UF33 1036 aa10.04□□□□□ -0.8
FAM3A-221ENST00000612856 KLK4Q9Y5K2 254 aa10.04□□□□□ -0.8
FAM3A-221ENST00000612856 A3GALT2U3KPV4 340 aa10.04□□□□□ -0.8
FAM3A-221ENST00000612856 EYSQ5T1H1 3165 aa10.04□□□□□ -0.8
FAM3A-221ENST00000612856 FAM166BA8MTA8 275 aa10.04□□□□□ -0.8
FAM3A-221ENST00000612856 SGCEO43556 437 aa10.04□□□□□ -0.8
FAM3A-221ENST00000612856 GDF9O60383 454 aa10.04□□□□□ -0.8
FAM3A-221ENST00000612856 RAF1P04049 648 aa10.04□□□□□ -0.8
FAM3A-221ENST00000612856 HSD3B1P14060 373 aa10.04□□□□□ -0.8
FAM3A-221ENST00000612856 GLB1P16278 677 aa10.04□□□□□ -0.8
FAM3A-221ENST00000612856 HSD3B2P26439 372 aa10.04□□□□□ -0.8
FAM3A-221ENST00000612856 GIFP27352 417 aa10.04□□□□□ -0.8
FAM3A-221ENST00000612856 NDUFAF6Q330K2 333 aa10.04□□□□□ -0.8
FAM3A-221ENST00000612856 COX20Q5RI15 118 aa10.04□□□□□ -0.8
FAM3A-221ENST00000612856 OTPQ5XKR4 325 aa10.04□□□□□ -0.8
FAM3A-221ENST00000612856 PLPP6Q8IY26 295 aa10.04□□□□□ -0.8
FAM3A-221ENST00000612856 HORMAD2Q8N7B1 307 aa10.04□□□□□ -0.8
FAM3A-221ENST00000612856 LINC01555Q8NAE3 123 aa10.04□□□□□ -0.8
FAM3A-221ENST00000612856 NSMAFQ92636 917 aa10.04□□□□□ -0.8
FAM3A-221ENST00000612856 UFD1Q92890 307 aa10.04□□□□□ -0.8
FAM3A-221ENST00000612856 MARC2Q969Z3 335 aa10.04□□□□□ -0.8
FAM3A-221ENST00000612856 LINC00052Q96N35 136 aa10.04□□□□□ -0.8
FAM3A-221ENST00000612856 OR5B2Q96R09 309 aa10.04□□□□□ -0.8
FAM3A-221ENST00000612856 TEX101Q9BY14 249 aa10.04□□□□□ -0.8
FAM3A-221ENST00000612856 MS4A8Q9BY19 250 aa10.04□□□□□ -0.8
FAM3A-221ENST00000612856 KCNN2Q9H2S1 579 aa10.04□□□□□ -0.8
FAM3A-221ENST00000612856 MAGIXQ9H6Y5 334 aa10.04□□□□□ -0.8
FAM3A-221ENST00000612856 METTL17Q9H7H0 456 aaPredicted RBP10.04□□□□□ -0.8
FAM3A-221ENST00000612856 COPS3Q9UNS2 423 aa10.04□□□□□ -0.8
FAM3A-221ENST00000612856 A0A1B0GW55 424 aa10.03□□□□□ -0.8
FAM3A-221ENST00000612856 SHOXO15266 292 aa10.03□□□□□ -0.8
FAM3A-221ENST00000612856 ARPC5O15511 151 aa10.03□□□□□ -0.8
FAM3A-221ENST00000612856 SRPX2O60687 465 aaPredicted RBP10.03□□□□□ -0.8
FAM3A-221ENST00000612856 DUX4L2P0CJ85 424 aa10.03□□□□□ -0.8
FAM3A-221ENST00000612856 DUX4L3P0CJ86 424 aa10.03□□□□□ -0.8
FAM3A-221ENST00000612856 DUX4L4P0CJ87 422 aa10.03□□□□□ -0.8
FAM3A-221ENST00000612856 DUX4L5P0CJ88 424 aa10.03□□□□□ -0.8
FAM3A-221ENST00000612856 DUX4L6P0CJ89 424 aa10.03□□□□□ -0.8
FAM3A-221ENST00000612856 DUX4L7P0CJ90 424 aa10.03□□□□□ -0.8
FAM3A-221ENST00000612856 FOLR1P15328 257 aa10.03□□□□□ -0.8
FAM3A-221ENST00000612856 CBR1P16152 277 aa10.03□□□□□ -0.8
FAM3A-221ENST00000612856 DLSTP36957 453 aa10.03□□□□□ -0.8
FAM3A-221ENST00000612856 SRP9P49458 86 aaKnown RBP10.03□□□□□ -0.8
FAM3A-221ENST00000612856 ST3GAL3Q11203 375 aa10.03□□□□□ -0.8
FAM3A-221ENST00000612856 RGNQ15493 299 aa10.03□□□□□ -0.8
FAM3A-221ENST00000612856 ZNF79Q15937 498 aa10.03□□□□□ -0.8
FAM3A-221ENST00000612856 PLK5Q496M5 336 aa10.03□□□□□ -0.8
FAM3A-221ENST00000612856 EEF1A1P5Q5VTE0 462 aa10.03□□□□□ -0.8
FAM3A-221ENST00000612856 SLC25A25Q6KCM7 469 aa10.03□□□□□ -0.8
FAM3A-221ENST00000612856 FAM180AQ6UWF9 173 aa10.03□□□□□ -0.8
FAM3A-221ENST00000612856 CCDC71Q8IV32 467 aaPredicted RBP10.03□□□□□ -0.8
FAM3A-221ENST00000612856 NRMQ8IXM6 262 aa10.03□□□□□ -0.8
FAM3A-221ENST00000612856 ZFP82Q8N141 532 aa10.03□□□□□ -0.8
FAM3A-221ENST00000612856 CHCHD4Q8N4Q1 142 aa10.03□□□□□ -0.8
FAM3A-221ENST00000612856 OR4M1Q8NGD0 313 aa10.03□□□□□ -0.8
FAM3A-221ENST00000612856 ZNF566Q969W8 418 aa10.03□□□□□ -0.8
FAM3A-221ENST00000612856 HRASLS5Q96KN8 279 aa10.03□□□□□ -0.8
FAM3A-221ENST00000612856 OR51J1Q9H342 316 aa10.03□□□□□ -0.8
FAM3A-221ENST00000612856 TRPV4Q9HBA0 871 aa10.03□□□□□ -0.8
FAM3A-221ENST00000612856 ZNF71Q9NQZ8 489 aaPredicted RBP10.03□□□□□ -0.8
FAM3A-221ENST00000612856 SDHAF2Q9NX18 166 aa10.03□□□□□ -0.8
FAM3A-221ENST00000612856 TAS2R3Q9NYW6 316 aa10.03□□□□□ -0.8
FAM3A-221ENST00000612856 DUX4Q9UBX2 424 aa10.03□□□□□ -0.8
FAM3A-221ENST00000612856 A0A1W2PR48 441 aa10.03□□□□□ -0.8
FAM3A-221ENST00000612856 LRIT2A6NDA9 550 aa10.03□□□□□ -0.8
FAM3A-221ENST00000612856 FGF17O60258 216 aa10.03□□□□□ -0.8
FAM3A-221ENST00000612856 PAHP00439 452 aa10.03□□□□□ -0.8
FAM3A-221ENST00000612856 GDF1P27539 372 aa10.03□□□□□ -0.8
FAM3A-221ENST00000612856 ASAH1Q13510 395 aa10.03□□□□□ -0.8
FAM3A-221ENST00000612856 EIPR1Q53HC9 387 aa10.03□□□□□ -0.8
FAM3A-221ENST00000612856 MANEAQ5SRI9 462 aa10.03□□□□□ -0.8
FAM3A-221ENST00000612856 TMEM88Q6PEY1 159 aa10.03□□□□□ -0.8
FAM3A-221ENST00000612856 HAGHLQ6PII5 290 aaPredicted RBP10.03□□□□□ -0.8
FAM3A-221ENST00000612856 RFT1Q96AA3 541 aa10.03□□□□□ -0.8
FAM3A-221ENST00000612856 PDLIM5Q96HC4 596 aaKnown RBP10.03□□□□□ -0.8
FAM3A-221ENST00000612856 GUCD1Q96NT3 240 aa10.03□□□□□ -0.8
FAM3A-221ENST00000612856 CD180Q99467 661 aa10.03□□□□□ -0.8
FAM3A-221ENST00000612856 SDHCQ99643 169 aaPredicted RBP10.03□□□□□ -0.8
FAM3A-221ENST00000612856 USB1Q9BQ65 265 aaKnown RBP10.03□□□□□ -0.8
FAM3A-221ENST00000612856 FUZQ9BT04 418 aa10.03□□□□□ -0.8
FAM3A-221ENST00000612856 CXorf36Q9H7Y0 433 aa10.03□□□□□ -0.8
FAM3A-221ENST00000612856 ZNF69Q9UC07 566 aa10.03□□□□□ -0.8
FAM3A-221ENST00000612856 RPL36Q9Y3U8 105 aaKnown RBP10.03□□□□□ -0.8
FAM3A-221ENST00000612856 AP1M2Q9Y6Q5 423 aa10.03□□□□□ -0.8
FAM3A-221ENST00000612856 TCRBV16S1A1N1A0A5B0 115 aa10.03□□□□□ -0.8
FAM3A-221ENST00000612856 NPIPA5E9PKD4 350 aa10.03□□□□□ -0.8
FAM3A-221ENST00000612856 ARNTLO00327 626 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms