RNA–Protein interactions for RNA: ENST00000611897.1

HMGB1P24-201, Transcript of high mobility group box 1 pseudogene 24, humanhuman

BASIC

Gene HMGB1P24, Length 328 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P24-201ENST00000611897 VRK1Q99986 396 aaPredicted RBP11.69□□□□□ -0.54
HMGB1P24-201ENST00000611897 PIMREGQ9BSJ6 248 aa11.69□□□□□ -0.54
HMGB1P24-201ENST00000611897 POLE3Q9NRF9 147 aa11.69□□□□□ -0.54
HMGB1P24-201ENST00000611897 PARPBPQ9NWS1 579 aa11.69□□□□□ -0.54
HMGB1P24-201ENST00000611897 ASIC5Q9NY37 505 aa11.69□□□□□ -0.54
HMGB1P24-201ENST00000611897 LPAR3Q9UBY5 353 aa11.69□□□□□ -0.54
HMGB1P24-201ENST00000611897 OSGIN1Q9UJX0 560 aa11.69□□□□□ -0.54
HMGB1P24-201ENST00000611897 KCNS2Q9ULS6 477 aa11.69□□□□□ -0.54
HMGB1P24-201ENST00000611897 LOC100289279A0A1B0GTE1 492 aa11.68□□□□□ -0.54
HMGB1P24-201ENST00000611897 PRSS51A0A1B0GVH4 220 aa11.68□□□□□ -0.54
HMGB1P24-201ENST00000611897 EIF1BO60739 113 aaKnown RBP11.68□□□□□ -0.54
HMGB1P24-201ENST00000611897 AKR7A3O95154 331 aa11.68□□□□□ -0.54
HMGB1P24-201ENST00000611897 WNT11O96014 354 aa11.68□□□□□ -0.54
HMGB1P24-201ENST00000611897 APEHP13798 732 aaKnown RBP11.68□□□□□ -0.54
HMGB1P24-201ENST00000611897 IGFBP5P24593 272 aa11.68□□□□□ -0.54
HMGB1P24-201ENST00000611897 APOBEC3AP31941 199 aaPredicted RBP11.68□□□□□ -0.54
HMGB1P24-201ENST00000611897 S100A3P33764 101 aa11.68□□□□□ -0.54
HMGB1P24-201ENST00000611897 HTR3AP46098 478 aa11.68□□□□□ -0.54
HMGB1P24-201ENST00000611897 GZMKP49863 264 aa11.68□□□□□ -0.54
HMGB1P24-201ENST00000611897 PDLIM4P50479 330 aa11.68□□□□□ -0.54
HMGB1P24-201ENST00000611897 PRPS1P60891 318 aa11.68□□□□□ -0.54
HMGB1P24-201ENST00000611897 SNRPD2P62316 118 aaKnown RBP11.68□□□□□ -0.54
HMGB1P24-201ENST00000611897 CEACAM7Q14002 265 aa11.68□□□□□ -0.54
HMGB1P24-201ENST00000611897 SYPL1Q16563 259 aa11.68□□□□□ -0.54
HMGB1P24-201ENST00000611897 FAM174BQ3ZCQ3 159 aa11.68□□□□□ -0.54
HMGB1P24-201ENST00000611897 IQCCQ4KMZ1 466 aa11.68□□□□□ -0.54
HMGB1P24-201ENST00000611897 FAM166AQ6J272 317 aa11.68□□□□□ -0.54
HMGB1P24-201ENST00000611897 SPATA19Q7Z5L4 167 aa11.68□□□□□ -0.54
HMGB1P24-201ENST00000611897 CADM2Q8N3J6 435 aa11.68□□□□□ -0.54
HMGB1P24-201ENST00000611897 C17orf78Q8N4C9 275 aa11.68□□□□□ -0.54
HMGB1P24-201ENST00000611897 TMEM99Q8N816 258 aa11.68□□□□□ -0.54
HMGB1P24-201ENST00000611897 C1orf162Q8NEQ5 155 aaPredicted RBP11.68□□□□□ -0.54
HMGB1P24-201ENST00000611897 OR8J2Q8NGG1 315 aa11.68□□□□□ -0.54
HMGB1P24-201ENST00000611897 WDR60Q8WVS4 1066 aa11.68□□□□□ -0.54
HMGB1P24-201ENST00000611897 ZBTB9Q96C00 473 aa11.68□□□□□ -0.54
HMGB1P24-201ENST00000611897 NEURL3Q96EH8 262 aa11.68□□□□□ -0.54
HMGB1P24-201ENST00000611897 SORCS2Q96PQ0 1159 aa11.68□□□□□ -0.54
HMGB1P24-201ENST00000611897 ALKBH3Q96Q83 286 aaPredicted RBP11.68□□□□□ -0.54
HMGB1P24-201ENST00000611897 EXOSC3Q9NQT5 275 aaKnown RBP11.68□□□□□ -0.54
HMGB1P24-201ENST00000611897 ADPRHL2Q9NX46 363 aa11.68□□□□□ -0.54
HMGB1P24-201ENST00000611897 LGALS13Q9UHV8 139 aa11.68□□□□□ -0.54
HMGB1P24-201ENST00000611897 DCTN4Q9UJW0 460 aa11.68□□□□□ -0.54
HMGB1P24-201ENST00000611897 PRAMEF27A3QJZ7 478 aa11.67□□□□□ -0.54
HMGB1P24-201ENST00000611897 SLC35F4A4IF30 521 aa11.67□□□□□ -0.54
HMGB1P24-201ENST00000611897 E9PBE3 544 aa11.67□□□□□ -0.54
HMGB1P24-201ENST00000611897 PDLIM1O00151 329 aa11.67□□□□□ -0.54
HMGB1P24-201ENST00000611897 HMGN4O00479 90 aa11.67□□□□□ -0.54
HMGB1P24-201ENST00000611897 LGI1O95970 557 aa11.67□□□□□ -0.54
HMGB1P24-201ENST00000611897 SERPINE1P05121 402 aa11.67□□□□□ -0.54
HMGB1P24-201ENST00000611897 GSNP06396 782 aa11.67□□□□□ -0.54
HMGB1P24-201ENST00000611897 CHRM4P08173 479 aa11.67□□□□□ -0.54
HMGB1P24-201ENST00000611897 NUDT17P0C025 328 aa11.67□□□□□ -0.54
HMGB1P24-201ENST00000611897 MYZAPP0CAP1 466 aa11.67□□□□□ -0.54
HMGB1P24-201ENST00000611897 NR2F1P10589 423 aa11.67□□□□□ -0.54
HMGB1P24-201ENST00000611897 UQCRBP14927 111 aa11.67□□□□□ -0.54
HMGB1P24-201ENST00000611897 IL7RP16871 459 aa11.67□□□□□ -0.54
HMGB1P24-201ENST00000611897 MPGP29372 298 aa11.67□□□□□ -0.54
HMGB1P24-201ENST00000611897 CLK1P49759 484 aaKnown RBP11.67□□□□□ -0.54
HMGB1P24-201ENST00000611897 CLNS1AP54105 237 aaKnown RBP11.67□□□□□ -0.54
HMGB1P24-201ENST00000611897 TUBA1BP68363 451 aa11.67□□□□□ -0.54
HMGB1P24-201ENST00000611897 TUBA4AP68366 448 aa11.67□□□□□ -0.54
HMGB1P24-201ENST00000611897 LGALS3BPQ08380 585 aa11.67□□□□□ -0.54
HMGB1P24-201ENST00000611897 BNIP2Q12982 314 aa11.67□□□□□ -0.54
HMGB1P24-201ENST00000611897 SLC17A1Q14916 467 aa11.67□□□□□ -0.54
HMGB1P24-201ENST00000611897 MRPL2Q5T653 305 aaKnown RBP11.67□□□□□ -0.54
HMGB1P24-201ENST00000611897 TUBA1AQ71U36 451 aa11.67□□□□□ -0.54
HMGB1P24-201ENST00000611897 OR9K2Q8NGE7 335 aa11.67□□□□□ -0.54
HMGB1P24-201ENST00000611897 PROX1Q92786 737 aa11.67□□□□□ -0.54
HMGB1P24-201ENST00000611897 PMM1Q92871 262 aa11.67□□□□□ -0.54
HMGB1P24-201ENST00000611897 AURKBQ96GD4 344 aaPredicted RBP11.67□□□□□ -0.54
HMGB1P24-201ENST00000611897 ZNF385AQ96PM9 386 aaKnown RBP11.67□□□□□ -0.54
HMGB1P24-201ENST00000611897 PANX1Q96RD7 426 aa11.67□□□□□ -0.54
HMGB1P24-201ENST00000611897 C19orf24Q9BVV8 132 aa11.67□□□□□ -0.54
HMGB1P24-201ENST00000611897 NUF2Q9BZD4 464 aa11.67□□□□□ -0.54
HMGB1P24-201ENST00000611897 SAP130Q9H0E3 1048 aa11.67□□□□□ -0.54
HMGB1P24-201ENST00000611897 TRAPPC4Q9Y296 219 aa11.67□□□□□ -0.54
HMGB1P24-201ENST00000611897 CFAP73A6NFT4 308 aa11.66□□□□□ -0.54
HMGB1P24-201ENST00000611897 GPIP06744 558 aa11.66□□□□□ -0.54
HMGB1P24-201ENST00000611897 GKN3PP0CG01 181 aa11.66□□□□□ -0.54
HMGB1P24-201ENST00000611897 LBPP18428 481 aa11.66□□□□□ -0.54
HMGB1P24-201ENST00000611897 HNF1AP20823 631 aa11.66□□□□□ -0.54
HMGB1P24-201ENST00000611897 CXCR1P25024 350 aa11.66□□□□□ -0.54
HMGB1P24-201ENST00000611897 FKBP2P26885 142 aaKnown RBP11.66□□□□□ -0.54
HMGB1P24-201ENST00000611897 SLC1A3P43003 542 aa11.66□□□□□ -0.54
HMGB1P24-201ENST00000611897 ANXA11P50995 505 aaKnown RBP11.66□□□□□ -0.54
HMGB1P24-201ENST00000611897 UBE2NP61088 152 aaKnown RBP11.66□□□□□ -0.54
HMGB1P24-201ENST00000611897 ABCE1P61221 599 aaKnown RBP11.66□□□□□ -0.54
HMGB1P24-201ENST00000611897 H3F3AP84243 136 aa11.66□□□□□ -0.54
HMGB1P24-201ENST00000611897 GNA13Q14344 377 aa11.66□□□□□ -0.54
HMGB1P24-201ENST00000611897 CASP8Q14790 479 aa11.66□□□□□ -0.54
HMGB1P24-201ENST00000611897 PAQR6Q6TCH4 344 aa11.66□□□□□ -0.54
HMGB1P24-201ENST00000611897 ZNF621Q6ZSS3 439 aa11.66□□□□□ -0.54
HMGB1P24-201ENST00000611897 FOXN4Q96NZ1 517 aa11.66□□□□□ -0.54
HMGB1P24-201ENST00000611897 TAPBPLQ9BX59 468 aa11.66□□□□□ -0.54
HMGB1P24-201ENST00000611897 SLC38A1Q9H2H9 487 aa11.66□□□□□ -0.54
HMGB1P24-201ENST00000611897 A0A096LPE4 126 aa11.65□□□□□ -0.54
HMGB1P24-201ENST00000611897 IGHV1-18A0A0C4DH31 117 aa11.65□□□□□ -0.54
HMGB1P24-201ENST00000611897 IGHV4-61A0A0C4DH41 118 aa11.65□□□□□ -0.54
HMGB1P24-201ENST00000611897 A0A1W2PPZ6 126 aa11.65□□□□□ -0.54
HMGB1P24-201ENST00000611897 CCDC154A6NI56 674 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms