RNA–Protein interactions for RNA: ENST00000588917.2

CIRBP-220, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-220ENST00000588917 LURAP1LQ8IV03 231 aa17.56■□□□□ 0.4
CIRBP-220ENST00000588917 OFCC1Q8IZS5 231 aa17.56■□□□□ 0.4
CIRBP-220ENST00000588917 OR6S1Q8NH40 331 aa17.56■□□□□ 0.4
CIRBP-220ENST00000588917 ZFP3Q96NJ6 502 aa17.56■□□□□ 0.4
CIRBP-220ENST00000588917 OR11A1Q9GZK7 315 aa17.56■□□□□ 0.4
CIRBP-220ENST00000588917 ANKRD19PQ9H560 264 aa17.56■□□□□ 0.4
CIRBP-220ENST00000588917 YY1AP1Q9H869 796 aa17.56■□□□□ 0.4
CIRBP-220ENST00000588917 TRAV36DV7A0A075B6V5 113 aa17.55■□□□□ 0.4
CIRBP-220ENST00000588917 A0A1W2PNR3 127 aa17.55■□□□□ 0.4
CIRBP-220ENST00000588917 NPIPB7O75200 414 aa17.55■□□□□ 0.4
CIRBP-220ENST00000588917 SEMA7AO75326 666 aa17.55■□□□□ 0.4
CIRBP-220ENST00000588917 RAP2AP10114 183 aa17.55■□□□□ 0.4
CIRBP-220ENST00000588917 ENPP1P22413 925 aa17.55■□□□□ 0.4
CIRBP-220ENST00000588917 SHC1P29353 583 aa17.55■□□□□ 0.4
CIRBP-220ENST00000588917 YAP1P46937 504 aaKnown RBP17.55■□□□□ 0.4
CIRBP-220ENST00000588917 OR2B6P58173 313 aa17.55■□□□□ 0.4
CIRBP-220ENST00000588917 VLDLRP98155 873 aa17.55■□□□□ 0.4
CIRBP-220ENST00000588917 PMPCAQ10713 525 aa17.55■□□□□ 0.4
CIRBP-220ENST00000588917 MFSD13AQ14CX5 517 aa17.55■□□□□ 0.4
CIRBP-220ENST00000588917 PON3Q15166 354 aa17.55■□□□□ 0.4
CIRBP-220ENST00000588917 RTL6Q6ICC9 239 aa17.55■□□□□ 0.4
CIRBP-220ENST00000588917 C3P1Q6ZMU1 363 aa17.55■□□□□ 0.4
CIRBP-220ENST00000588917 RRM2BQ7LG56 351 aa17.55■□□□□ 0.4
CIRBP-220ENST00000588917 FJX1Q86VR8 437 aa17.55■□□□□ 0.4
CIRBP-220ENST00000588917 ZDHHC21Q8IVQ6 265 aa17.55■□□□□ 0.4
CIRBP-220ENST00000588917 SLC43A2Q8N370 569 aa17.55■□□□□ 0.4
CIRBP-220ENST00000588917 MFSD8Q8NHS3 518 aa17.55■□□□□ 0.4
CIRBP-220ENST00000588917 SSC4DQ8WTU2 575 aa17.55■□□□□ 0.4
CIRBP-220ENST00000588917 RND1Q92730 232 aa17.55■□□□□ 0.4
CIRBP-220ENST00000588917 ARL5BQ96KC2 179 aa17.55■□□□□ 0.4
CIRBP-220ENST00000588917 PIP5K1AQ99755 562 aa17.55■□□□□ 0.4
CIRBP-220ENST00000588917 NAA11Q9BSU3 229 aaPredicted RBP17.55■□□□□ 0.4
CIRBP-220ENST00000588917 KLHL4Q9C0H6 718 aa17.55■□□□□ 0.4
CIRBP-220ENST00000588917 PLEKHB1Q9UF11 243 aaPredicted RBP17.55■□□□□ 0.4
CIRBP-220ENST00000588917 FAM215AQ9Y5M1 114 aa17.55■□□□□ 0.4
CIRBP-220ENST00000588917 FREM3P0C091 2139 aa17.54■□□□□ 0.4
CIRBP-220ENST00000588917 ICE1Q9Y2F5 2266 aa17.54■□□□□ 0.4
CIRBP-220ENST00000588917 ZNF407Q9C0G0 2248 aa17.54■□□□□ 0.4
CIRBP-220ENST00000588917 DHRS12A0PJE2 317 aa17.54■□□□□ 0.4
CIRBP-220ENST00000588917 MBD3L4A6NDZ8 208 aaPredicted RBP17.54■□□□□ 0.4
CIRBP-220ENST00000588917 MBD3L3A6NE82 208 aaPredicted RBP17.54■□□□□ 0.4
CIRBP-220ENST00000588917 MBD3L5A6NJ08 208 aaPredicted RBP17.54■□□□□ 0.4
CIRBP-220ENST00000588917 hCG_2039718K7EN88 272 aa17.54■□□□□ 0.4
CIRBP-220ENST00000588917 LYPD3O95274 346 aa17.54■□□□□ 0.4
CIRBP-220ENST00000588917 THY1P04216 161 aa17.54■□□□□ 0.4
CIRBP-220ENST00000588917 GLI4P10075 376 aa17.54■□□□□ 0.4
CIRBP-220ENST00000588917 AGFG1P52594 562 aaKnown RBP17.54■□□□□ 0.4
CIRBP-220ENST00000588917 SMSP52788 366 aa17.54■□□□□ 0.4
CIRBP-220ENST00000588917 EGR4Q05215 589 aa17.54■□□□□ 0.4
CIRBP-220ENST00000588917 FAM69AQ5T7M9 428 aa17.54■□□□□ 0.4
CIRBP-220ENST00000588917 RIPPLY2Q5TAB7 128 aa17.54■□□□□ 0.4
CIRBP-220ENST00000588917 RNF113BQ8IZP6 322 aaKnown RBP17.54■□□□□ 0.4
CIRBP-220ENST00000588917 PIK3C3Q8NEB9 887 aa17.54■□□□□ 0.4
CIRBP-220ENST00000588917 MBD3L2Q8NHZ7 208 aaPredicted RBP17.54■□□□□ 0.4
CIRBP-220ENST00000588917 DMRTA2Q96SC8 542 aa17.54■□□□□ 0.4
CIRBP-220ENST00000588917 ZNF426Q9BUY5 554 aa17.54■□□□□ 0.4
CIRBP-220ENST00000588917 COQ10BQ9H8M1 238 aa17.54■□□□□ 0.4
CIRBP-220ENST00000588917 NMNAT1Q9HAN9 279 aaPredicted RBP17.54■□□□□ 0.4
CIRBP-220ENST00000588917 GLRX2Q9NS18 164 aa17.54■□□□□ 0.4
CIRBP-220ENST00000588917 CLCF1Q9UBD9 225 aa17.54■□□□□ 0.4
CIRBP-220ENST00000588917 UNC79Q9P2D8 2635 aa17.54■□□□□ 0.4
CIRBP-220ENST00000588917 A0A1W2PRQ8 180 aa17.53■□□□□ 0.4
CIRBP-220ENST00000588917 TCRBV3S1A0A5B6 114 aa17.53■□□□□ 0.4
CIRBP-220ENST00000588917 ZC3H12DA2A288 527 aaKnown RBP17.53■□□□□ 0.4
CIRBP-220ENST00000588917 HSPB2A8KAH6 182 aa17.53■□□□□ 0.4
CIRBP-220ENST00000588917 J3KTA2 159 aa17.53■□□□□ 0.4
CIRBP-220ENST00000588917 KRT36O76013 467 aa17.53■□□□□ 0.4
CIRBP-220ENST00000588917 RCBTB2O95199 551 aa17.53■□□□□ 0.4
CIRBP-220ENST00000588917 IGF2P01344 180 aa17.53■□□□□ 0.4
CIRBP-220ENST00000588917 H1F0P07305 194 aaKnown RBP17.53■□□□□ 0.4
CIRBP-220ENST00000588917 FPR1P21462 350 aa17.53■□□□□ 0.4
CIRBP-220ENST00000588917 GTF2E2P29084 291 aaKnown RBP17.53■□□□□ 0.4
CIRBP-220ENST00000588917 MAGEA2P43356 314 aa17.53■□□□□ 0.4
CIRBP-220ENST00000588917 DGCR6Q14129 220 aa17.53■□□□□ 0.4
CIRBP-220ENST00000588917 RNPS1Q15287 305 aaKnown RBP17.53■□□□□ 0.4
CIRBP-220ENST00000588917 HSPB2Q16082 182 aa17.53■□□□□ 0.4
CIRBP-220ENST00000588917 PPP4R4Q6NUP7 873 aa17.53■□□□□ 0.4
CIRBP-220ENST00000588917 TSEN54Q7Z6J9 526 aaKnown RBP17.53■□□□□ 0.4
CIRBP-220ENST00000588917 TSPYL5Q86VY4 417 aaPredicted RBP17.53■□□□□ 0.4
CIRBP-220ENST00000588917 TMEM239Q8WW34 195 aa17.53■□□□□ 0.4
CIRBP-220ENST00000588917 ZNF845Q96IR2 970 aaPredicted RBP17.53■□□□□ 0.4
CIRBP-220ENST00000588917 PRSS27Q9BQR3 290 aa17.53■□□□□ 0.4
CIRBP-220ENST00000588917 GP6Q9HCN6 339 aa17.53■□□□□ 0.4
CIRBP-220ENST00000588917 COQ3Q9NZJ6 369 aa17.53■□□□□ 0.4
CIRBP-220ENST00000588917 ERRFI1Q9UJM3 462 aaPredicted RBP17.53■□□□□ 0.4
CIRBP-220ENST00000588917 AURKCQ9UQB9 309 aa17.53■□□□□ 0.4
CIRBP-220ENST00000588917 MED31Q9Y3C7 131 aa17.53■□□□□ 0.4
CIRBP-220ENST00000588917 LIPT2A6NK58 231 aa17.52■□□□□ 0.4
CIRBP-220ENST00000588917 FFAR1O14842 300 aa17.52■□□□□ 0.4
CIRBP-220ENST00000588917 PRSS23O95084 383 aa17.52■□□□□ 0.4
CIRBP-220ENST00000588917 MT-ATP6P00846 226 aa17.52■□□□□ 0.4
CIRBP-220ENST00000588917 CRHP06850 196 aa17.52■□□□□ 0.4
CIRBP-220ENST00000588917 IMPDH2P12268 514 aa17.52■□□□□ 0.4
CIRBP-220ENST00000588917 CEACAM8P31997 349 aaPredicted RBP17.52■□□□□ 0.4
CIRBP-220ENST00000588917 RPS5P46782 204 aaKnown RBP17.52■□□□□ 0.4
CIRBP-220ENST00000588917 ZNF239Q16600 458 aaKnown RBP17.52■□□□□ 0.4
CIRBP-220ENST00000588917 IQCCQ4KMZ1 466 aa17.52■□□□□ 0.4
CIRBP-220ENST00000588917 NKAIN4Q8IVV8 208 aa17.52■□□□□ 0.4
CIRBP-220ENST00000588917 MCEMP1Q8IX19 187 aa17.52■□□□□ 0.4
CIRBP-220ENST00000588917 ADGRG5Q8IZF4 528 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms