RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 HOXB6P17509 224 aaKnown RBP12.44□□□□□ -0.42
TRAF4-215ENST00000584944 SHC1P29353 583 aa12.44□□□□□ -0.42
TRAF4-215ENST00000584944 DLX5P56178 289 aa12.44□□□□□ -0.42
TRAF4-215ENST00000584944 CTBP2P56545 445 aa12.44□□□□□ -0.42
TRAF4-215ENST00000584944 SMIM11AP58511 58 aa12.44□□□□□ -0.42
TRAF4-215ENST00000584944 RAC3P60763 192 aa12.44□□□□□ -0.42
TRAF4-215ENST00000584944 PIN1Q13526 163 aaPredicted RBP12.44□□□□□ -0.42
TRAF4-215ENST00000584944 OR7A5Q15622 319 aa12.44□□□□□ -0.42
TRAF4-215ENST00000584944 C1orf146Q5VVC0 180 aa12.44□□□□□ -0.42
TRAF4-215ENST00000584944 LCN8Q6JVE9 175 aa12.44□□□□□ -0.42
TRAF4-215ENST00000584944 TMPPEQ6ZT21 453 aa12.44□□□□□ -0.42
TRAF4-215ENST00000584944 CNEP1R1Q8N9A8 125 aa12.44□□□□□ -0.42
TRAF4-215ENST00000584944 FNDC9Q8TBE3 224 aa12.44□□□□□ -0.42
TRAF4-215ENST00000584944 STK35Q8TDR2 534 aa12.44□□□□□ -0.42
TRAF4-215ENST00000584944 CA5BP1Q8WTZ4 195 aa12.44□□□□□ -0.42
TRAF4-215ENST00000584944 ASB5Q8WWX0 329 aa12.44□□□□□ -0.42
TRAF4-215ENST00000584944 LRRC46Q96FV0 321 aa12.44□□□□□ -0.42
TRAF4-215ENST00000584944 ZNF845Q96IR2 970 aaPredicted RBP12.44□□□□□ -0.42
TRAF4-215ENST00000584944 ZFP3Q96NJ6 502 aa12.44□□□□□ -0.42
TRAF4-215ENST00000584944 RAB3IPQ96QF0 476 aaPredicted RBP12.44□□□□□ -0.42
TRAF4-215ENST00000584944 CADM1Q9BY67 442 aaKnown RBP12.44□□□□□ -0.42
TRAF4-215ENST00000584944 POTEKPQ9BYX7 375 aa12.44□□□□□ -0.42
TRAF4-215ENST00000584944 KRCC1Q9NPI7 259 aaPredicted RBP12.44□□□□□ -0.42
TRAF4-215ENST00000584944 AURKCQ9UQB9 309 aa12.44□□□□□ -0.42
TRAF4-215ENST00000584944 TRAPPC4Q9Y296 219 aa12.44□□□□□ -0.42
TRAF4-215ENST00000584944 EMC9Q9Y3B6 208 aa12.44□□□□□ -0.42
TRAF4-215ENST00000584944 FAM215AQ9Y5M1 114 aa12.44□□□□□ -0.42
TRAF4-215ENST00000584944 MYO7BQ6PIF6 2116 aa12.44□□□□□ -0.42
TRAF4-215ENST00000584944 DNAJC13O75165 2243 aa12.43□□□□□ -0.42
TRAF4-215ENST00000584944 TRAV36DV7A0A075B6V5 113 aa12.43□□□□□ -0.42
TRAF4-215ENST00000584944 A0A087WUJ7 227 aa12.43□□□□□ -0.42
TRAF4-215ENST00000584944 KPNA4O00629 521 aaPredicted RBP12.43□□□□□ -0.42
TRAF4-215ENST00000584944 DVL2O14641 736 aa12.43□□□□□ -0.42
TRAF4-215ENST00000584944 DNPH1O43598 174 aa12.43□□□□□ -0.42
TRAF4-215ENST00000584944 EFNA2O43921 213 aa12.43□□□□□ -0.42
TRAF4-215ENST00000584944 PMS2P2O95744 297 aa12.43□□□□□ -0.42
TRAF4-215ENST00000584944 HIST1H2ABP04908 130 aa12.43□□□□□ -0.42
TRAF4-215ENST00000584944 TMIGD3P0DMS9 266 aaPredicted RBP12.43□□□□□ -0.42
TRAF4-215ENST00000584944 UMPSP11172 480 aa12.43□□□□□ -0.42
TRAF4-215ENST00000584944 NQO1P15559 274 aaKnown RBP12.43□□□□□ -0.42
TRAF4-215ENST00000584944 RPS5P46782 204 aaKnown RBP12.43□□□□□ -0.42
TRAF4-215ENST00000584944 MFSD13AQ14CX5 517 aa12.43□□□□□ -0.42
TRAF4-215ENST00000584944 TRAM2Q15035 370 aa12.43□□□□□ -0.42
TRAF4-215ENST00000584944 RNPS1Q15287 305 aaKnown RBP12.43□□□□□ -0.42
TRAF4-215ENST00000584944 NPTX1Q15818 432 aa12.43□□□□□ -0.42
TRAF4-215ENST00000584944 FXNQ16595 210 aa12.43□□□□□ -0.42
TRAF4-215ENST00000584944 FGD3Q5JSP0 725 aa12.43□□□□□ -0.42
TRAF4-215ENST00000584944 RIPPLY2Q5TAB7 128 aa12.43□□□□□ -0.42
TRAF4-215ENST00000584944 EEF1A1P5Q5VTE0 462 aa12.43□□□□□ -0.42
TRAF4-215ENST00000584944 FCRLAQ7L513 359 aa12.43□□□□□ -0.42
TRAF4-215ENST00000584944 HIST3H2AQ7L7L0 130 aa12.43□□□□□ -0.42
TRAF4-215ENST00000584944 GDF7Q7Z4P5 450 aa12.43□□□□□ -0.42
TRAF4-215ENST00000584944 CDK20Q8IZL9 346 aa12.43□□□□□ -0.42
TRAF4-215ENST00000584944 SLC43A2Q8N370 569 aa12.43□□□□□ -0.42
TRAF4-215ENST00000584944 HIST1H2ACQ93077 130 aa12.43□□□□□ -0.42
TRAF4-215ENST00000584944 ZNF524Q96C55 264 aa12.43□□□□□ -0.42
TRAF4-215ENST00000584944 SDCCAG3Q96C92 435 aa12.43□□□□□ -0.42
TRAF4-215ENST00000584944 INTS12Q96CB8 462 aaKnown RBP12.43□□□□□ -0.42
TRAF4-215ENST00000584944 CCDC120Q96HB5 630 aa12.43□□□□□ -0.42
TRAF4-215ENST00000584944 HS6ST2Q96MM7 605 aa12.43□□□□□ -0.42
TRAF4-215ENST00000584944 ZNF347Q96SE7 839 aa12.43□□□□□ -0.42
TRAF4-215ENST00000584944 ASPNQ9BXN1 380 aa12.43□□□□□ -0.42
TRAF4-215ENST00000584944 AMBRA1Q9C0C7 1298 aa12.43□□□□□ -0.42
TRAF4-215ENST00000584944 YY1AP1Q9H869 796 aa12.43□□□□□ -0.42
TRAF4-215ENST00000584944 EMC3Q9P0I2 261 aa12.43□□□□□ -0.42
TRAF4-215ENST00000584944 ENPP4Q9Y6X5 453 aa12.43□□□□□ -0.42
TRAF4-215ENST00000584944 GNGT2O14610 69 aa12.42□□□□□ -0.42
TRAF4-215ENST00000584944 ZG16O60844 167 aa12.42□□□□□ -0.42
TRAF4-215ENST00000584944 OR6A2O95222 327 aa12.42□□□□□ -0.42
TRAF4-215ENST00000584944 FREM3P0C091 2139 aa12.42□□□□□ -0.42
TRAF4-215ENST00000584944 RHCEP18577 417 aa12.42□□□□□ -0.42
TRAF4-215ENST00000584944 PTNP21246 168 aa12.42□□□□□ -0.42
TRAF4-215ENST00000584944 ATP6V1B2P21281 511 aa12.42□□□□□ -0.42
TRAF4-215ENST00000584944 FPR1P21462 350 aa12.42□□□□□ -0.42
TRAF4-215ENST00000584944 CHRNB4P30926 498 aa12.42□□□□□ -0.42
TRAF4-215ENST00000584944 OPRM1P35372 400 aa12.42□□□□□ -0.42
TRAF4-215ENST00000584944 TIMP3P35625 211 aa12.42□□□□□ -0.42
TRAF4-215ENST00000584944 TAF11Q15544 211 aa12.42□□□□□ -0.42
TRAF4-215ENST00000584944 ZNF239Q16600 458 aaKnown RBP12.42□□□□□ -0.42
TRAF4-215ENST00000584944 CTU2Q2VPK5 515 aaKnown RBP12.42□□□□□ -0.42
TRAF4-215ENST00000584944 TMEM201Q5SNT2 666 aa12.42□□□□□ -0.42
TRAF4-215ENST00000584944 FAM69AQ5T7M9 428 aa12.42□□□□□ -0.42
TRAF4-215ENST00000584944 TMEM225Q6GV28 225 aa12.42□□□□□ -0.42
TRAF4-215ENST00000584944 RTL6Q6ICC9 239 aa12.42□□□□□ -0.42
TRAF4-215ENST00000584944 XKRXQ6PP77 449 aa12.42□□□□□ -0.42
TRAF4-215ENST00000584944 ZNF730Q6ZMV8 503 aa12.42□□□□□ -0.42
TRAF4-215ENST00000584944 MRGPRGQ86SM5 289 aa12.42□□□□□ -0.42
TRAF4-215ENST00000584944 P3H2Q8IVL5 708 aa12.42□□□□□ -0.42
TRAF4-215ENST00000584944 ZDHHC21Q8IVQ6 265 aa12.42□□□□□ -0.42
TRAF4-215ENST00000584944 GCNT2Q8N0V5 402 aa12.42□□□□□ -0.42
TRAF4-215ENST00000584944 OR4D11Q8NGI4 311 aa12.42□□□□□ -0.42
TRAF4-215ENST00000584944 PIGXQ8TBF5 258 aa12.42□□□□□ -0.42
TRAF4-215ENST00000584944 ROBO4Q8WZ75 1007 aa12.42□□□□□ -0.42
TRAF4-215ENST00000584944 ARL5BQ96KC2 179 aa12.42□□□□□ -0.42
TRAF4-215ENST00000584944 PIP5K1AQ99755 562 aa12.42□□□□□ -0.42
TRAF4-215ENST00000584944 WFDC6Q9BQY6 131 aa12.42□□□□□ -0.42
TRAF4-215ENST00000584944 TACO1Q9BSH4 297 aaKnown RBP12.42□□□□□ -0.42
TRAF4-215ENST00000584944 TMEM43Q9BTV4 400 aa12.42□□□□□ -0.42
TRAF4-215ENST00000584944 GLRX2Q9NS18 164 aa12.42□□□□□ -0.42
TRAF4-215ENST00000584944 KLHL9Q9P2J3 617 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms