RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 SERINC2Q96SA4 455 aa12.19□□□□□ -0.46
PCDHGB3-201ENST00000576222 LSM5Q9Y4Y9 91 aaKnown RBP12.19□□□□□ -0.46
PCDHGB3-201ENST00000576222 TRIP11Q15643 1979 aa12.19□□□□□ -0.46
PCDHGB3-201ENST00000576222 A0A0B4J2A0 478 aa12.19□□□□□ -0.46
PCDHGB3-201ENST00000576222 PAPLNO95428 1278 aa12.19□□□□□ -0.46
PCDHGB3-201ENST00000576222 RHOP08100 348 aa12.19□□□□□ -0.46
PCDHGB3-201ENST00000576222 LIM2P55344 173 aa12.19□□□□□ -0.46
PCDHGB3-201ENST00000576222 NOGQ13253 232 aa12.19□□□□□ -0.46
PCDHGB3-201ENST00000576222 DHCR24Q15392 516 aa12.19□□□□□ -0.46
PCDHGB3-201ENST00000576222 DEFB115Q30KQ5 88 aa12.19□□□□□ -0.46
PCDHGB3-201ENST00000576222 H3F3CQ6NXT2 135 aa12.19□□□□□ -0.46
PCDHGB3-201ENST00000576222 C1orf94Q6P1W5 598 aa12.19□□□□□ -0.46
PCDHGB3-201ENST00000576222 TCEAL8Q8IYN2 117 aa12.19□□□□□ -0.46
PCDHGB3-201ENST00000576222 SLC38A6Q8IZM9 456 aa12.19□□□□□ -0.46
PCDHGB3-201ENST00000576222 RNF141Q8WVD5 230 aa12.19□□□□□ -0.46
PCDHGB3-201ENST00000576222 TMEM106AQ96A25 262 aa12.19□□□□□ -0.46
PCDHGB3-201ENST00000576222 SLC25A19Q9HC21 320 aa12.19□□□□□ -0.46
PCDHGB3-201ENST00000576222 TLR9Q9NR96 1032 aa12.19□□□□□ -0.46
PCDHGB3-201ENST00000576222 CYSLTR2Q9NS75 346 aa12.19□□□□□ -0.46
PCDHGB3-201ENST00000576222 SHPKQ9UHJ6 478 aa12.19□□□□□ -0.46
PCDHGB3-201ENST00000576222 MAFFQ9ULX9 164 aa12.19□□□□□ -0.46
PCDHGB3-201ENST00000576222 TMEM72A0PK05 275 aa12.19□□□□□ -0.46
PCDHGB3-201ENST00000576222 OR52A4PA6NMU1 304 aa12.19□□□□□ -0.46
PCDHGB3-201ENST00000576222 SLC2A10O95528 541 aa12.19□□□□□ -0.46
PCDHGB3-201ENST00000576222 RNH1P13489 461 aaKnown RBP12.19□□□□□ -0.46
PCDHGB3-201ENST00000576222 SLC2A5P22732 501 aa12.19□□□□□ -0.46
PCDHGB3-201ENST00000576222 GRM7Q14831 915 aa12.19□□□□□ -0.46
PCDHGB3-201ENST00000576222 ZNF674Q2M3X9 581 aa12.19□□□□□ -0.46
PCDHGB3-201ENST00000576222 MORN1Q5T089 497 aa12.19□□□□□ -0.46
PCDHGB3-201ENST00000576222 C12orf73Q69YU5 71 aa12.19□□□□□ -0.46
PCDHGB3-201ENST00000576222 HS3ST2Q9Y278 367 aa12.19□□□□□ -0.46
PCDHGB3-201ENST00000576222 SCN1AP35498 2009 aa12.18□□□□□ -0.46
PCDHGB3-201ENST00000576222 A0A1W2PP55 124 aa12.18□□□□□ -0.46
PCDHGB3-201ENST00000576222 ZC3H12DA2A288 527 aaKnown RBP12.18□□□□□ -0.46
PCDHGB3-201ENST00000576222 TMEM202A6NGA9 273 aa12.18□□□□□ -0.46
PCDHGB3-201ENST00000576222 OR6C65A6NJZ3 312 aa12.18□□□□□ -0.46
PCDHGB3-201ENST00000576222 C2orf74A8MZ97 194 aa12.18□□□□□ -0.46
PCDHGB3-201ENST00000576222 FBXO24O75426 580 aa12.18□□□□□ -0.46
PCDHGB3-201ENST00000576222 MED6O75586 246 aa12.18□□□□□ -0.46
PCDHGB3-201ENST00000576222 BDKRB2P30411 391 aa12.18□□□□□ -0.46
PCDHGB3-201ENST00000576222 BDH1Q02338 343 aa12.18□□□□□ -0.46
PCDHGB3-201ENST00000576222 C19orf57Q0VDD7 668 aa12.18□□□□□ -0.46
PCDHGB3-201ENST00000576222 CCINQ13939 588 aa12.18□□□□□ -0.46
PCDHGB3-201ENST00000576222 LCN10Q6JVE6 187 aa12.18□□□□□ -0.46
PCDHGB3-201ENST00000576222 CNKSR3Q6P9H4 555 aa12.18□□□□□ -0.46
PCDHGB3-201ENST00000576222 FIGLAQ6QHK4 219 aa12.18□□□□□ -0.46
PCDHGB3-201ENST00000576222 SYT9Q86SS6 491 aa12.18□□□□□ -0.46
PCDHGB3-201ENST00000576222 PLA2G15Q8NCC3 412 aa12.18□□□□□ -0.46
PCDHGB3-201ENST00000576222 CLCC1Q96S66 551 aa12.18□□□□□ -0.46
PCDHGB3-201ENST00000576222 HRASLSQ9HDD0 168 aa12.18□□□□□ -0.46
PCDHGB3-201ENST00000576222 POMT2Q9UKY4 750 aa12.18□□□□□ -0.46
PCDHGB3-201ENST00000576222 ETV7Q9Y603 341 aa12.18□□□□□ -0.46
PCDHGB3-201ENST00000576222 LEUTXA8MZ59 168 aa12.18□□□□□ -0.46
PCDHGB3-201ENST00000576222 PRKRAO75569 313 aaKnown RBP12.18□□□□□ -0.46
PCDHGB3-201ENST00000576222 PMS2P2O95744 297 aa12.18□□□□□ -0.46
PCDHGB3-201ENST00000576222 CSNK2A1P68400 391 aaPredicted RBP12.18□□□□□ -0.46
PCDHGB3-201ENST00000576222 MAMDC2Q7Z304 686 aaPredicted RBP12.18□□□□□ -0.46
PCDHGB3-201ENST00000576222 TMPRSS9Q7Z410 1059 aa12.18□□□□□ -0.46
PCDHGB3-201ENST00000576222 RELL2Q8NC24 303 aaPredicted RBP12.18□□□□□ -0.46
PCDHGB3-201ENST00000576222 DUSP18Q8NEJ0 188 aa12.18□□□□□ -0.46
PCDHGB3-201ENST00000576222 CSNK2A3Q8NEV1 391 aa12.18□□□□□ -0.46
PCDHGB3-201ENST00000576222 OR14K1Q8NGZ2 314 aa12.18□□□□□ -0.46
PCDHGB3-201ENST00000576222 DVL3Q92997 716 aaPredicted RBP12.18□□□□□ -0.46
PCDHGB3-201ENST00000576222 C3orf49Q96BT1 292 aa12.18□□□□□ -0.46
PCDHGB3-201ENST00000576222 TRMT2BQ96GJ1 504 aaKnown RBP12.18□□□□□ -0.46
PCDHGB3-201ENST00000576222 V9GYH0 126 aa12.18□□□□□ -0.46
PCDHGB3-201ENST00000576222 KNL1Q8NG31 2342 aa12.18□□□□□ -0.46
PCDHGB3-201ENST00000576222 C17orf113A0A1B0GUU1 675 aa12.18□□□□□ -0.46
PCDHGB3-201ENST00000576222 MPIG6BO95866 241 aa12.18□□□□□ -0.46
PCDHGB3-201ENST00000576222 PPT1P50897 306 aa12.18□□□□□ -0.46
PCDHGB3-201ENST00000576222 WNT3P56703 355 aa12.18□□□□□ -0.46
PCDHGB3-201ENST00000576222 RPL19P84098 196 aaKnown RBP12.18□□□□□ -0.46
PCDHGB3-201ENST00000576222 AKR1C8PQ5T2L2 129 aa12.18□□□□□ -0.46
PCDHGB3-201ENST00000576222 ZNF620Q6ZNG0 422 aa12.18□□□□□ -0.46
PCDHGB3-201ENST00000576222 OVCH1Q7RTY7 1134 aa12.18□□□□□ -0.46
PCDHGB3-201ENST00000576222 WFDC5Q8TCV5 224 aa12.18□□□□□ -0.46
PCDHGB3-201ENST00000576222 MMABQ96EY8 250 aaPredicted RBP12.18□□□□□ -0.46
PCDHGB3-201ENST00000576222 C10orf90Q96M02 699 aa12.18□□□□□ -0.46
PCDHGB3-201ENST00000576222 MYADMQ96S97 322 aa12.18□□□□□ -0.46
PCDHGB3-201ENST00000576222 C12orf57Q99622 126 aa12.18□□□□□ -0.46
PCDHGB3-201ENST00000576222 SULT4A1Q9BR01 284 aa12.18□□□□□ -0.46
PCDHGB3-201ENST00000576222 NIT2Q9NQR4 276 aa12.18□□□□□ -0.46
PCDHGB3-201ENST00000576222 A0A1B0GUH1 482 aa12.18□□□□□ -0.46
PCDHGB3-201ENST00000576222 TSPAN11A1L157 253 aa12.18□□□□□ -0.46
PCDHGB3-201ENST00000576222 E9PI62 339 aa12.18□□□□□ -0.46
PCDHGB3-201ENST00000576222 HRO43593 1189 aa12.18□□□□□ -0.46
PCDHGB3-201ENST00000576222 IFNA2P01563 188 aa12.18□□□□□ -0.46
PCDHGB3-201ENST00000576222 AKR1C2P52895 323 aa12.18□□□□□ -0.46
PCDHGB3-201ENST00000576222 DEFA6Q01524 100 aa12.18□□□□□ -0.46
PCDHGB3-201ENST00000576222 AKR1C1Q04828 323 aa12.18□□□□□ -0.46
PCDHGB3-201ENST00000576222 SQSTM1Q13501 440 aa12.18□□□□□ -0.46
PCDHGB3-201ENST00000576222 EIF2B1Q14232 305 aaKnown RBP12.18□□□□□ -0.46
PCDHGB3-201ENST00000576222 RPE65Q16518 533 aa12.18□□□□□ -0.46
PCDHGB3-201ENST00000576222 OR2A12Q8NGT7 310 aa12.18□□□□□ -0.46
PCDHGB3-201ENST00000576222 PTCHD1Q96NR3 888 aa12.18□□□□□ -0.46
PCDHGB3-201ENST00000576222 SLC5A7Q9GZV3 580 aa12.18□□□□□ -0.46
PCDHGB3-201ENST00000576222 ZNF337Q9Y3M9 751 aa12.18□□□□□ -0.46
PCDHGB3-201ENST00000576222 ARFGEF1Q9Y6D6 1849 aa12.17□□□□□ -0.46
PCDHGB3-201ENST00000576222 TRIM64A6NGJ6 449 aa12.17□□□□□ -0.46
PCDHGB3-201ENST00000576222 HEPACAM2A8MVW5 462 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms