RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 LETMD1Q6P1Q0 360 aa5.08□□□□□ -1.6
SMG6-219ENST00000575663 LEG1Q6P5S2 330 aa5.08□□□□□ -1.6
SMG6-219ENST00000575663 ZAR1Q86SH2 424 aa5.08□□□□□ -1.6
SMG6-219ENST00000575663 C1QL4Q86Z23 238 aa5.08□□□□□ -1.6
SMG6-219ENST00000575663 ZCCHC24Q8N2G6 241 aaKnown RBP5.08□□□□□ -1.6
SMG6-219ENST00000575663 POMGNT2Q8NAT1 580 aa5.08□□□□□ -1.6
SMG6-219ENST00000575663 OR5W2Q8NH69 310 aa5.08□□□□□ -1.6
SMG6-219ENST00000575663 RFWD2Q8NHY2 731 aa5.08□□□□□ -1.6
SMG6-219ENST00000575663 MIPOL1Q8TD10 442 aa5.08□□□□□ -1.6
SMG6-219ENST00000575663 GPR119Q8TDV5 335 aa5.08□□□□□ -1.6
SMG6-219ENST00000575663 WFDC12Q8WWY7 111 aa5.08□□□□□ -1.6
SMG6-219ENST00000575663 TMEM234Q8WY98 164 aa5.08□□□□□ -1.6
SMG6-219ENST00000575663 ST8SIA1Q92185 356 aa5.08□□□□□ -1.6
SMG6-219ENST00000575663 HOXB13Q92826 284 aaPredicted RBP5.08□□□□□ -1.6
SMG6-219ENST00000575663 LRRC58Q96CX6 371 aa5.08□□□□□ -1.6
SMG6-219ENST00000575663 CHMP6Q96FZ7 201 aa5.08□□□□□ -1.6
SMG6-219ENST00000575663 BOD1Q96IK1 185 aa5.08□□□□□ -1.6
SMG6-219ENST00000575663 NSUN5Q96P11 429 aaKnown RBP5.08□□□□□ -1.6
SMG6-219ENST00000575663 ZNF317Q96PQ6 595 aaPredicted RBP5.08□□□□□ -1.6
SMG6-219ENST00000575663 DOK1Q99704 481 aa5.08□□□□□ -1.6
SMG6-219ENST00000575663 ACPTQ9BZG2 426 aa5.08□□□□□ -1.6
SMG6-219ENST00000575663 HOXD1Q9GZZ0 328 aa5.08□□□□□ -1.6
SMG6-219ENST00000575663 MS4A5Q9H3V2 200 aa5.08□□□□□ -1.6
SMG6-219ENST00000575663 SLC7A10Q9NS82 523 aa5.08□□□□□ -1.6
SMG6-219ENST00000575663 ZNF275Q9NSD4 429 aaPredicted RBP5.08□□□□□ -1.6
SMG6-219ENST00000575663 TMEM45AQ9NWC5 275 aa5.08□□□□□ -1.6
SMG6-219ENST00000575663 TESQ9UGI8 421 aaKnown RBP5.08□□□□□ -1.6
SMG6-219ENST00000575663 ZDHHC2Q9UIJ5 367 aa5.08□□□□□ -1.6
SMG6-219ENST00000575663 HDGFL3Q9Y3E1 203 aa5.08□□□□□ -1.6
SMG6-219ENST00000575663 CMAHPQ9Y471 501 aa5.08□□□□□ -1.6
SMG6-219ENST00000575663 MMP24Q9Y5R2 645 aa5.08□□□□□ -1.6
SMG6-219ENST00000575663 NOTCH1P46531 2555 aa5.08□□□□□ -1.6
SMG6-219ENST00000575663 A0A096LPK6 155 aa5.07□□□□□ -1.6
SMG6-219ENST00000575663 ARPC4-TTLL3A0A0A6YYG9 625 aa5.07□□□□□ -1.6
SMG6-219ENST00000575663 OR6C65A6NJZ3 312 aa5.07□□□□□ -1.6
SMG6-219ENST00000575663 CLDN34H7C241 214 aa5.07□□□□□ -1.6
SMG6-219ENST00000575663 ZNF264O43296 627 aa5.07□□□□□ -1.6
SMG6-219ENST00000575663 EIF4E2O60573 245 aaKnown RBP5.07□□□□□ -1.6
SMG6-219ENST00000575663 EIF1BO60739 113 aaKnown RBP5.07□□□□□ -1.6
SMG6-219ENST00000575663 ULK1O75385 1050 aa5.07□□□□□ -1.6
SMG6-219ENST00000575663 SASH3O75995 380 aa5.07□□□□□ -1.6
SMG6-219ENST00000575663 PMS2P2O95744 297 aa5.07□□□□□ -1.6
SMG6-219ENST00000575663 GSNP06396 782 aa5.07□□□□□ -1.6
SMG6-219ENST00000575663 C2P06681 752 aa5.07□□□□□ -1.6
SMG6-219ENST00000575663 RPS17P08708 135 aaKnown RBP5.07□□□□□ -1.6
SMG6-219ENST00000575663 RBP1P09455 135 aa5.07□□□□□ -1.6
SMG6-219ENST00000575663 ACP2P11117 423 aa5.07□□□□□ -1.6
SMG6-219ENST00000575663 FKBP2P26885 142 aaKnown RBP5.07□□□□□ -1.6
SMG6-219ENST00000575663 CALCRP30988 508 aa5.07□□□□□ -1.6
SMG6-219ENST00000575663 STX2P32856 288 aa5.07□□□□□ -1.6
SMG6-219ENST00000575663 MAP3K8P41279 467 aa5.07□□□□□ -1.6
SMG6-219ENST00000575663 SERPINB8P50452 374 aa5.07□□□□□ -1.6
SMG6-219ENST00000575663 LMO4P61968 165 aa5.07□□□□□ -1.6
SMG6-219ENST00000575663 MERTKQ12866 999 aa5.07□□□□□ -1.6
SMG6-219ENST00000575663 SNTB2Q13425 540 aaKnown RBP5.07□□□□□ -1.6
SMG6-219ENST00000575663 DAG1Q14118 895 aa5.07□□□□□ -1.6
SMG6-219ENST00000575663 UAP1Q16222 522 aaPredicted RBP5.07□□□□□ -1.6
SMG6-219ENST00000575663 DUSP5Q16690 384 aa5.07□□□□□ -1.6
SMG6-219ENST00000575663 TBRG1Q3YBR2 411 aa5.07□□□□□ -1.6
SMG6-219ENST00000575663 TNFAIP8L3Q5GJ75 292 aa5.07□□□□□ -1.6
SMG6-219ENST00000575663 ZNF362Q5T0B9 420 aaPredicted RBP5.07□□□□□ -1.6
SMG6-219ENST00000575663 CCNJQ5T5M9 372 aa5.07□□□□□ -1.6
SMG6-219ENST00000575663 TSPO2Q5TGU0 170 aa5.07□□□□□ -1.6
SMG6-219ENST00000575663 ANKRD16Q6P6B7 361 aa5.07□□□□□ -1.6
SMG6-219ENST00000575663 ZCCHC12Q6PEW1 402 aa5.07□□□□□ -1.6
SMG6-219ENST00000575663 SPATC1Q76KD6 591 aa5.07□□□□□ -1.6
SMG6-219ENST00000575663 REC114Q7Z4M0 266 aa5.07□□□□□ -1.6
SMG6-219ENST00000575663 FAM169BQ8N8A8 192 aa5.07□□□□□ -1.6
SMG6-219ENST00000575663 SLC16A11Q8NCK7 471 aa5.07□□□□□ -1.6
SMG6-219ENST00000575663 FAM76AQ8TAV0 307 aa5.07□□□□□ -1.6
SMG6-219ENST00000575663 UBLCP1Q8WVY7 318 aaPredicted RBP5.07□□□□□ -1.6
SMG6-219ENST00000575663 POP5Q969H6 163 aaKnown RBP5.07□□□□□ -1.6
SMG6-219ENST00000575663 TMIGD2Q96BF3 282 aa5.07□□□□□ -1.6
SMG6-219ENST00000575663 APIPQ96GX9 242 aa5.07□□□□□ -1.6
SMG6-219ENST00000575663 ATP6V1G3Q96LB4 118 aa5.07□□□□□ -1.6
SMG6-219ENST00000575663 ZIM3Q96PE6 472 aa5.07□□□□□ -1.6
SMG6-219ENST00000575663 BTBD2Q9BX70 525 aa5.07□□□□□ -1.6
SMG6-219ENST00000575663 C1QTNF5Q9BXJ0 243 aa5.07□□□□□ -1.6
SMG6-219ENST00000575663 QRSL1Q9H0R6 528 aaKnown RBP5.07□□□□□ -1.6
SMG6-219ENST00000575663 ACSS3Q9H6R3 686 aa5.07□□□□□ -1.6
SMG6-219ENST00000575663 C7orf69Q9H7B7 122 aa5.07□□□□□ -1.6
SMG6-219ENST00000575663 BEX1Q9HBH7 125 aa5.07□□□□□ -1.6
SMG6-219ENST00000575663 SSU72Q9NP77 194 aaKnown RBP5.07□□□□□ -1.6
SMG6-219ENST00000575663 DUSP22Q9NRW4 184 aa5.07□□□□□ -1.6
SMG6-219ENST00000575663 GIN1Q9NXP7 522 aa5.07□□□□□ -1.6
SMG6-219ENST00000575663 TAS2R7Q9NYW3 318 aa5.07□□□□□ -1.6
SMG6-219ENST00000575663 PDP1Q9P0J1 537 aaPredicted RBP5.07□□□□□ -1.6
SMG6-219ENST00000575663 CRNNQ9UBG3 495 aaPredicted RBP5.07□□□□□ -1.6
SMG6-219ENST00000575663 REV1Q9UBZ9 1251 aa5.07□□□□□ -1.6
SMG6-219ENST00000575663 LGALS13Q9UHV8 139 aa5.07□□□□□ -1.6
SMG6-219ENST00000575663 ZNF180Q9UJW8 692 aa5.07□□□□□ -1.6
SMG6-219ENST00000575663 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.06□□□□□ -1.6
SMG6-219ENST00000575663 TMEM129A0AVI4 362 aa5.06□□□□□ -1.6
SMG6-219ENST00000575663 ZNF587BE7ETH6 402 aa5.06□□□□□ -1.6
SMG6-219ENST00000575663 MANBAO00462 879 aa5.06□□□□□ -1.6
SMG6-219ENST00000575663 WNT9BO14905 357 aa5.06□□□□□ -1.6
SMG6-219ENST00000575663 ANKRD28O15084 1053 aa5.06□□□□□ -1.6
SMG6-219ENST00000575663 OIP5O43482 229 aa5.06□□□□□ -1.6
SMG6-219ENST00000575663 PLPP2O43688 288 aa5.06□□□□□ -1.6
SMG6-219ENST00000575663 CYP7B1O75881 506 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms