RNA–Protein interactions for RNA: ENST00000574964.1

NPLOC4-218, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-218ENST00000574964 C6orf203Q9P0P8 240 aaPredicted RBP13.02□□□□□ -0.33
NPLOC4-218ENST00000574964 SLC5A6Q9Y289 635 aa13.02□□□□□ -0.33
NPLOC4-218ENST00000574964 TRAPPC4Q9Y296 219 aa13.02□□□□□ -0.33
NPLOC4-218ENST00000574964 ZNF175Q9Y473 711 aa13.02□□□□□ -0.33
NPLOC4-218ENST00000574964 FAM215AQ9Y5M1 114 aa13.02□□□□□ -0.33
NPLOC4-218ENST00000574964 TRAV36DV7A0A075B6V5 113 aa13.01□□□□□ -0.33
NPLOC4-218ENST00000574964 KPNA4O00629 521 aaPredicted RBP13.01□□□□□ -0.33
NPLOC4-218ENST00000574964 SEMA7AO75326 666 aa13.01□□□□□ -0.33
NPLOC4-218ENST00000574964 PMS2P2O95744 297 aa13.01□□□□□ -0.33
NPLOC4-218ENST00000574964 MT-ND1P03886 318 aa13.01□□□□□ -0.33
NPLOC4-218ENST00000574964 THY1P04216 161 aa13.01□□□□□ -0.33
NPLOC4-218ENST00000574964 SEMG1P04279 462 aa13.01□□□□□ -0.33
NPLOC4-218ENST00000574964 RAP2AP10114 183 aa13.01□□□□□ -0.33
NPLOC4-218ENST00000574964 FCGR2AP12318 317 aa13.01□□□□□ -0.33
NPLOC4-218ENST00000574964 HOXB6P17509 224 aaKnown RBP13.01□□□□□ -0.33
NPLOC4-218ENST00000574964 FPR1P21462 350 aa13.01□□□□□ -0.33
NPLOC4-218ENST00000574964 ENPP1P22413 925 aa13.01□□□□□ -0.33
NPLOC4-218ENST00000574964 RPS5P46782 204 aaKnown RBP13.01□□□□□ -0.33
NPLOC4-218ENST00000574964 NUP107P57740 925 aa13.01□□□□□ -0.33
NPLOC4-218ENST00000574964 FGD3Q5JSP0 725 aa13.01□□□□□ -0.33
NPLOC4-218ENST00000574964 GTF2IRD2BQ6EKJ0 949 aa13.01□□□□□ -0.33
NPLOC4-218ENST00000574964 RTL6Q6ICC9 239 aa13.01□□□□□ -0.33
NPLOC4-218ENST00000574964 PLXDC2Q6UX71 529 aa13.01□□□□□ -0.33
NPLOC4-218ENST00000574964 GTF2IRD2Q86UP8 949 aa13.01□□□□□ -0.33
NPLOC4-218ENST00000574964 LSRQ86X29 649 aaPredicted RBP13.01□□□□□ -0.33
NPLOC4-218ENST00000574964 ADGRG5Q8IZF4 528 aa13.01□□□□□ -0.33
NPLOC4-218ENST00000574964 RPRMLQ8N4K4 120 aa13.01□□□□□ -0.33
NPLOC4-218ENST00000574964 PIK3C3Q8NEB9 887 aa13.01□□□□□ -0.33
NPLOC4-218ENST00000574964 FNDC9Q8TBE3 224 aa13.01□□□□□ -0.33
NPLOC4-218ENST00000574964 CANT1Q8WVQ1 401 aa13.01□□□□□ -0.33
NPLOC4-218ENST00000574964 TMEM239Q8WW34 195 aa13.01□□□□□ -0.33
NPLOC4-218ENST00000574964 ROBO4Q8WZ75 1007 aa13.01□□□□□ -0.33
NPLOC4-218ENST00000574964 RND1Q92730 232 aa13.01□□□□□ -0.33
NPLOC4-218ENST00000574964 WNT2BQ93097 391 aa13.01□□□□□ -0.33
NPLOC4-218ENST00000574964 KTI12Q96EK9 354 aaPredicted RBP13.01□□□□□ -0.33
NPLOC4-218ENST00000574964 PIP5K1AQ99755 562 aa13.01□□□□□ -0.33
NPLOC4-218ENST00000574964 TM9SF2Q99805 663 aa13.01□□□□□ -0.33
NPLOC4-218ENST00000574964 TTYH2Q9BSA4 534 aa13.01□□□□□ -0.33
NPLOC4-218ENST00000574964 SRXN1Q9BYN0 137 aa13.01□□□□□ -0.33
NPLOC4-218ENST00000574964 YY1AP1Q9H869 796 aa13.01□□□□□ -0.33
NPLOC4-218ENST00000574964 NMNAT1Q9HAN9 279 aaPredicted RBP13.01□□□□□ -0.33
NPLOC4-218ENST00000574964 TESMINQ9Y4I5 508 aa13.01□□□□□ -0.33
NPLOC4-218ENST00000574964 NCOA6Q14686 2063 aaPredicted RBP13.01□□□□□ -0.33
NPLOC4-218ENST00000574964 IGKV1D-42A0A075B6H8 117 aa13□□□□□ -0.33
NPLOC4-218ENST00000574964 FFAR1O14842 300 aa13□□□□□ -0.33
NPLOC4-218ENST00000574964 DNPH1O43598 174 aa13□□□□□ -0.33
NPLOC4-218ENST00000574964 EIF1BO60739 113 aaKnown RBP13□□□□□ -0.33
NPLOC4-218ENST00000574964 LYPD3O95274 346 aa13□□□□□ -0.33
NPLOC4-218ENST00000574964 PLGP00747 810 aaPredicted RBP13□□□□□ -0.33
NPLOC4-218ENST00000574964 GLI4P10075 376 aa13□□□□□ -0.33
NPLOC4-218ENST00000574964 IMPDH2P12268 514 aa13□□□□□ -0.33
NPLOC4-218ENST00000574964 NQO1P15559 274 aaKnown RBP13□□□□□ -0.33
NPLOC4-218ENST00000574964 RBM34P42696 430 aaKnown RBP13□□□□□ -0.33
NPLOC4-218ENST00000574964 EGR4Q05215 589 aa13□□□□□ -0.33
NPLOC4-218ENST00000574964 ZNF239Q16600 458 aaKnown RBP13□□□□□ -0.33
NPLOC4-218ENST00000574964 FAM69AQ5T7M9 428 aa13□□□□□ -0.33
NPLOC4-218ENST00000574964 OR2A2Q6IF42 318 aa13□□□□□ -0.33
NPLOC4-218ENST00000574964 LINC00114Q6XXX2 140 aa13□□□□□ -0.33
NPLOC4-218ENST00000574964 ZNF730Q6ZMV8 503 aa13□□□□□ -0.33
NPLOC4-218ENST00000574964 WDR88Q6ZMY6 472 aa13□□□□□ -0.33
NPLOC4-218ENST00000574964 FCRLAQ7L513 359 aa13□□□□□ -0.33
NPLOC4-218ENST00000574964 PIWIL3Q7Z3Z3 882 aaKnown RBP13□□□□□ -0.33
NPLOC4-218ENST00000574964 TSEN54Q7Z6J9 526 aaKnown RBP13□□□□□ -0.33
NPLOC4-218ENST00000574964 OR52J3Q8NH60 311 aa13□□□□□ -0.33
NPLOC4-218ENST00000574964 MFSD8Q8NHS3 518 aa13□□□□□ -0.33
NPLOC4-218ENST00000574964 TMEM255BQ8WV15 326 aa13□□□□□ -0.33
NPLOC4-218ENST00000574964 UTP4Q969X6 686 aaKnown RBP13□□□□□ -0.33
NPLOC4-218ENST00000574964 UCN2Q96RP3 112 aa13□□□□□ -0.33
NPLOC4-218ENST00000574964 PRSS27Q9BQR3 290 aa13□□□□□ -0.33
NPLOC4-218ENST00000574964 SLC19A3Q9BZV2 496 aa13□□□□□ -0.33
NPLOC4-218ENST00000574964 KLHL4Q9C0H6 718 aa13□□□□□ -0.33
NPLOC4-218ENST00000574964 COQ3Q9NZJ6 369 aa13□□□□□ -0.33
NPLOC4-218ENST00000574964 CLCF1Q9UBD9 225 aa13□□□□□ -0.33
NPLOC4-218ENST00000574964 MED31Q9Y3C7 131 aa13□□□□□ -0.33
NPLOC4-218ENST00000574964 SPTBN1Q01082 2364 aaKnown RBP12.99□□□□□ -0.33
NPLOC4-218ENST00000574964 IGHV3-15A0A0B4J1V0 119 aa12.99□□□□□ -0.33
NPLOC4-218ENST00000574964 TCRBV3S1A0A5B6 114 aa12.99□□□□□ -0.33
NPLOC4-218ENST00000574964 MBD3L4A6NDZ8 208 aaPredicted RBP12.99□□□□□ -0.33
NPLOC4-218ENST00000574964 MBD3L3A6NE82 208 aaPredicted RBP12.99□□□□□ -0.33
NPLOC4-218ENST00000574964 MBD3L5A6NJ08 208 aaPredicted RBP12.99□□□□□ -0.33
NPLOC4-218ENST00000574964 LIPT2A6NK58 231 aa12.99□□□□□ -0.33
NPLOC4-218ENST00000574964 KDM4EB2RXH2 506 aaPredicted RBP12.99□□□□□ -0.33
NPLOC4-218ENST00000574964 GNGT2O14610 69 aa12.99□□□□□ -0.33
NPLOC4-218ENST00000574964 NPIPB7O75200 414 aa12.99□□□□□ -0.33
NPLOC4-218ENST00000574964 AGFG2O95081 481 aa12.99□□□□□ -0.33
NPLOC4-218ENST00000574964 GADD45GO95257 159 aa12.99□□□□□ -0.33
NPLOC4-218ENST00000574964 TGM6O95932 706 aa12.99□□□□□ -0.33
NPLOC4-218ENST00000574964 CBLP22681 906 aa12.99□□□□□ -0.33
NPLOC4-218ENST00000574964 RRM2P31350 389 aa12.99□□□□□ -0.33
NPLOC4-218ENST00000574964 TIMP3P35625 211 aa12.99□□□□□ -0.33
NPLOC4-218ENST00000574964 SMSP52788 366 aa12.99□□□□□ -0.33
NPLOC4-218ENST00000574964 MFSD13AQ14CX5 517 aa12.99□□□□□ -0.33
NPLOC4-218ENST00000574964 NCCRP1Q6ZVX7 275 aaPredicted RBP12.99□□□□□ -0.33
NPLOC4-218ENST00000574964 ADGRE4PQ86SQ3 457 aa12.99□□□□□ -0.33
NPLOC4-218ENST00000574964 C10orf67Q8IYJ2 551 aa12.99□□□□□ -0.33
NPLOC4-218ENST00000574964 CDK20Q8IZL9 346 aa12.99□□□□□ -0.33
NPLOC4-218ENST00000574964 C9orf106Q8NAJ2 232 aa12.99□□□□□ -0.33
NPLOC4-218ENST00000574964 MBD3L2Q8NHZ7 208 aaPredicted RBP12.99□□□□□ -0.33
NPLOC4-218ENST00000574964 TAAR8Q969N4 342 aa12.99□□□□□ -0.33
NPLOC4-218ENST00000574964 DMRTA2Q96SC8 542 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms