RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 GP1BAP07359 652 aa5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 RNASE1P07998 156 aaKnown RBP5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 MELTFP08582 738 aa5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 CD3GP09693 182 aa5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 RAB40ALP0C0E4 278 aa5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 ALPPL2P10696 532 aa5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 MYF5P13349 255 aa5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 PAICSP22234 425 aaKnown RBP5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 IGFBP6P24592 240 aaPredicted RBP5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 S100PP25815 95 aa5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 SHC1P29353 583 aa5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 OPRD1P41143 372 aa5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 SRP9P49458 86 aaKnown RBP5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 KHKP50053 298 aa5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 CCR6P51684 374 aa5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 KIAA1024LP59773 190 aa5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 RHOAP61586 193 aa5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 RPS13P62277 151 aaKnown RBP5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 MRPS6P82932 125 aaKnown RBP5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 ARF5P84085 180 aa5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 SSBP1Q04837 148 aaKnown RBP5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 BCL2L1Q07817 233 aa5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 LGALS3BPQ08380 585 aa5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 TWF1Q12792 350 aa5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 ILF3Q12906 894 aaKnown RBP eCLIP5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 OR2F1Q13607 317 aa5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 FGL2Q14314 439 aa5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 GRM7Q14831 915 aa5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 TRAM2Q15035 370 aa5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 DECR1Q16698 335 aa5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 CDNFQ49AH0 187 aa5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 FAM74A3Q4VXF1 159 aa5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 MPPE1Q53F39 396 aa5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 TEX30Q5JUR7 227 aa5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 AVPI1Q5T686 147 aa5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 PHF19Q5T6S3 580 aa5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 OR5M10Q6IEU7 315 aa5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 RPL13AP3Q6NVV1 102 aa5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 LPCAT3Q6P1A2 487 aa5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 CORO6Q6QEF8 472 aa5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 ATRAIDQ6UW56 229 aa5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 ALKAL2Q6UX46 152 aa5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 ETV3LQ6ZN32 361 aa5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 COMMD6Q7Z4G1 85 aa5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 LHFPL3Q86UP9 236 aa5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 KLBQ86Z14 1044 aa5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 APCDD1Q8J025 514 aa5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 KRT78Q8N1N4 520 aa5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 C12orf45Q8N5I9 185 aaPredicted RBP5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 ZFP41Q8N8Y5 198 aa5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 OR4K1Q8NGD4 311 aa5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 OR2I1PQ8NGU4 316 aa5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 PIGXQ8TBF5 258 aa5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 SLC22A8Q8TCC7 542 aa5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 GLYATL2Q8WU03 294 aa5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 C2orf15Q8WU43 125 aaKnown RBP5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 SLC38A5Q8WUX1 472 aa5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 RAB40AQ8WXH6 277 aa5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 TCEAL3Q969E4 200 aa5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 ECHDC3Q96DC8 303 aa5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 MTERF1Q99551 399 aaKnown RBP5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 ARHGDIGQ99819 225 aa5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 NDC1Q9BTX1 674 aa5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 PTDSS2Q9BVG9 487 aa5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 ALG8Q9BVK2 526 aa5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 ARL6Q9H0F7 186 aa5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 ALX4Q9H161 411 aaPredicted RBP5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 OR10A5Q9H207 317 aa5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 ABCG8Q9H221 673 aa5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 SLC38A1Q9H2H9 487 aa5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 OR51M1Q9H341 326 aa5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 RERGLQ9H628 205 aa5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 MVB12BQ9H7P6 319 aa5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 BARX1Q9HBU1 254 aaPredicted RBP5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 ZNF334Q9HCZ1 680 aaPredicted RBP5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 TXNRD2Q9NNW7 524 aa5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 MYOZ1Q9NP98 299 aaPredicted RBP5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 CTPS2Q9NRF8 586 aa5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 ZFP57Q9NU63 452 aa5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 ACSS1Q9NUB1 689 aaPredicted RBP5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 TDP1Q9NUW8 608 aa5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 AHSPQ9NZD4 102 aa5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 STOX2Q9P2F5 926 aaPredicted RBP5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 NFKBIL1Q9UBC1 381 aaPredicted RBP5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 TINAGQ9UJW2 476 aa5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 ZFP37Q9Y6Q3 630 aaPredicted RBP5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 PLXNA2O75051 1894 aa5.49□□□□□ -1.53
SNRPA1-209ENST00000560307 PIKFYVEQ9Y2I7 2098 aa5.48□□□□□ -1.53
SNRPA1-209ENST00000560307 A0A0G2JPF8 293 aa5.48□□□□□ -1.53
SNRPA1-209ENST00000560307 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.48□□□□□ -1.53
SNRPA1-209ENST00000560307 TMEM218A2RU14 115 aa5.48□□□□□ -1.53
SNRPA1-209ENST00000560307 POM121BA6NF01 834 aa5.48□□□□□ -1.53
SNRPA1-209ENST00000560307 FAM171A2A8MVW0 826 aa5.48□□□□□ -1.53
SNRPA1-209ENST00000560307 HNRNPCL3B7ZW38 293 aa5.48□□□□□ -1.53
SNRPA1-209ENST00000560307 DISC1C4P0D8 188 aa5.48□□□□□ -1.53
SNRPA1-209ENST00000560307 ANHXE9PGG2 379 aa5.48□□□□□ -1.53
SNRPA1-209ENST00000560307 UBE2CO00762 179 aa5.48□□□□□ -1.53
SNRPA1-209ENST00000560307 SYN3O14994 580 aa5.48□□□□□ -1.53
SNRPA1-209ENST00000560307 ARPC1BO15143 372 aaKnown RBP5.48□□□□□ -1.53
SNRPA1-209ENST00000560307 OGG1O15527 345 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms