RNA–Protein interactions for RNA: ENST00000559931.5

SMAD6-204, Transcript of SMAD family member 6, humanhuman

TSL 3

Gene SMAD6, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-204ENST00000559931 FUT4P22083 530 aa12.89□□□□□ -0.35
SMAD6-204ENST00000559931 CBLP22681 906 aa12.89□□□□□ -0.35
SMAD6-204ENST00000559931 GTF2E2P29084 291 aaKnown RBP12.89□□□□□ -0.35
SMAD6-204ENST00000559931 DIO1P49895 249 aa12.89□□□□□ -0.35
SMAD6-204ENST00000559931 CSNK2A1P68400 391 aaPredicted RBP12.89□□□□□ -0.35
SMAD6-204ENST00000559931 PPP1R8Q12972 351 aaKnown RBP12.89□□□□□ -0.35
SMAD6-204ENST00000559931 OR7A5Q15622 319 aa12.89□□□□□ -0.35
SMAD6-204ENST00000559931 IGFBP7Q16270 282 aa12.89□□□□□ -0.35
SMAD6-204ENST00000559931 EXOC3L2Q2M3D2 409 aa12.89□□□□□ -0.35
SMAD6-204ENST00000559931 TBPL2Q6SJ96 375 aa12.89□□□□□ -0.35
SMAD6-204ENST00000559931 TMPPEQ6ZT21 453 aa12.89□□□□□ -0.35
SMAD6-204ENST00000559931 GGNQ86UU5 652 aa12.89□□□□□ -0.35
SMAD6-204ENST00000559931 CD163Q86VB7 1156 aa12.89□□□□□ -0.35
SMAD6-204ENST00000559931 ATCAYQ86WG3 371 aa12.89□□□□□ -0.35
SMAD6-204ENST00000559931 OR10D3Q8NH80 312 aa12.89□□□□□ -0.35
SMAD6-204ENST00000559931 ACOT11Q8WXI4 607 aaPredicted RBP12.89□□□□□ -0.35
SMAD6-204ENST00000559931 TAAR8Q969N4 342 aa12.89□□□□□ -0.35
SMAD6-204ENST00000559931 PRRG4Q9BZD6 226 aa12.89□□□□□ -0.35
SMAD6-204ENST00000559931 PRDM14Q9GZV8 571 aa12.89□□□□□ -0.35
SMAD6-204ENST00000559931 S100A14Q9HCY8 104 aa12.89□□□□□ -0.35
SMAD6-204ENST00000559931 MAN2C1Q9NTJ4 1040 aa12.89□□□□□ -0.35
SMAD6-204ENST00000559931 C6orf203Q9P0P8 240 aaPredicted RBP12.89□□□□□ -0.35
SMAD6-204ENST00000559931 SH3BGRL2Q9UJC5 107 aa12.89□□□□□ -0.35
SMAD6-204ENST00000559931 ESPL1Q14674 2120 aa12.89□□□□□ -0.35
SMAD6-204ENST00000559931 IGKV1D-42A0A075B6H8 117 aa12.88□□□□□ -0.35
SMAD6-204ENST00000559931 A0A087WUU8 490 aa12.88□□□□□ -0.35
SMAD6-204ENST00000559931 FIGNL2A6NMB9 653 aa12.88□□□□□ -0.35
SMAD6-204ENST00000559931 OR2T1O43869 369 aa12.88□□□□□ -0.35
SMAD6-204ENST00000559931 CH25HO95992 272 aa12.88□□□□□ -0.35
SMAD6-204ENST00000559931 HIST1H2ABP04908 130 aa12.88□□□□□ -0.35
SMAD6-204ENST00000559931 IFI30P13284 250 aa12.88□□□□□ -0.35
SMAD6-204ENST00000559931 FPR1P21462 350 aa12.88□□□□□ -0.35
SMAD6-204ENST00000559931 ARHGDIAP52565 204 aa12.88□□□□□ -0.35
SMAD6-204ENST00000559931 UGT2B15P54855 530 aa12.88□□□□□ -0.35
SMAD6-204ENST00000559931 SLC35A1P78382 337 aa12.88□□□□□ -0.35
SMAD6-204ENST00000559931 ELF3P78545 371 aaPredicted RBP12.88□□□□□ -0.35
SMAD6-204ENST00000559931 EGR4Q05215 589 aa12.88□□□□□ -0.35
SMAD6-204ENST00000559931 HIST3H2AQ7L7L0 130 aa12.88□□□□□ -0.35
SMAD6-204ENST00000559931 AMIGO2Q86SJ2 522 aa12.88□□□□□ -0.35
SMAD6-204ENST00000559931 CHERPQ8IWX8 916 aaKnown RBP12.88□□□□□ -0.35
SMAD6-204ENST00000559931 NRMQ8IXM6 262 aa12.88□□□□□ -0.35
SMAD6-204ENST00000559931 RNF113BQ8IZP6 322 aaKnown RBP12.88□□□□□ -0.35
SMAD6-204ENST00000559931 PFN4Q8NHR9 129 aa12.88□□□□□ -0.35
SMAD6-204ENST00000559931 PIGXQ8TBF5 258 aa12.88□□□□□ -0.35
SMAD6-204ENST00000559931 SLC7A13Q8TCU3 470 aa12.88□□□□□ -0.35
SMAD6-204ENST00000559931 LRTOMTQ8WZ04 291 aa12.88□□□□□ -0.35
SMAD6-204ENST00000559931 HIST1H2ACQ93077 130 aa12.88□□□□□ -0.35
SMAD6-204ENST00000559931 ZHX1-C8orf76Q96EF9 292 aa12.88□□□□□ -0.35
SMAD6-204ENST00000559931 DHRS1Q96LJ7 313 aa12.88□□□□□ -0.35
SMAD6-204ENST00000559931 TRIB1Q96RU8 372 aa12.88□□□□□ -0.35
SMAD6-204ENST00000559931 TUBA1CQ9BQE3 449 aa12.88□□□□□ -0.35
SMAD6-204ENST00000559931 BDH2Q9BUT1 245 aa12.88□□□□□ -0.35
SMAD6-204ENST00000559931 SLC19A3Q9BZV2 496 aa12.88□□□□□ -0.35
SMAD6-204ENST00000559931 KRCC1Q9NPI7 259 aaPredicted RBP12.88□□□□□ -0.35
SMAD6-204ENST00000559931 PAQR5Q9NXK6 330 aaPredicted RBP12.88□□□□□ -0.35
SMAD6-204ENST00000559931 OSGIN2Q9Y236 505 aa12.88□□□□□ -0.35
SMAD6-204ENST00000559931 TRAPPC4Q9Y296 219 aa12.88□□□□□ -0.35
SMAD6-204ENST00000559931 LYVE1Q9Y5Y7 322 aa12.88□□□□□ -0.35
SMAD6-204ENST00000559931 TRGV8A0A0C4DH27 118 aa12.87□□□□□ -0.35
SMAD6-204ENST00000559931 CLCA1A8K7I4 914 aa12.87□□□□□ -0.35
SMAD6-204ENST00000559931 PIP5K1CO60331 668 aa12.87□□□□□ -0.35
SMAD6-204ENST00000559931 OR10H3O60404 316 aa12.87□□□□□ -0.35
SMAD6-204ENST00000559931 WDR1O75083 606 aa12.87□□□□□ -0.35
SMAD6-204ENST00000559931 NPIPB7O75200 414 aa12.87□□□□□ -0.35
SMAD6-204ENST00000559931 CCNB2O95067 398 aa12.87□□□□□ -0.35
SMAD6-204ENST00000559931 PMS2P2O95744 297 aa12.87□□□□□ -0.35
SMAD6-204ENST00000559931 IMPDH2P12268 514 aa12.87□□□□□ -0.35
SMAD6-204ENST00000559931 GABRA1P14867 456 aa12.87□□□□□ -0.35
SMAD6-204ENST00000559931 DNAJA1P31689 397 aaKnown RBP12.87□□□□□ -0.35
SMAD6-204ENST00000559931 IFNGR2P38484 337 aa12.87□□□□□ -0.35
SMAD6-204ENST00000559931 NUP107P57740 925 aa12.87□□□□□ -0.35
SMAD6-204ENST00000559931 MRPL49Q13405 166 aaKnown RBP12.87□□□□□ -0.35
SMAD6-204ENST00000559931 SEC23BQ15437 767 aa12.87□□□□□ -0.35
SMAD6-204ENST00000559931 ATP6AP1Q15904 470 aa12.87□□□□□ -0.35
SMAD6-204ENST00000559931 CTU2Q2VPK5 515 aaKnown RBP12.87□□□□□ -0.35
SMAD6-204ENST00000559931 FAM69AQ5T7M9 428 aa12.87□□□□□ -0.35
SMAD6-204ENST00000559931 C3P1Q6ZMU1 363 aa12.87□□□□□ -0.35
SMAD6-204ENST00000559931 MBOAT2Q6ZWT7 520 aa12.87□□□□□ -0.35
SMAD6-204ENST00000559931 P4HA3Q7Z4N8 544 aa12.87□□□□□ -0.35
SMAD6-204ENST00000559931 MEX3DQ86XN8 651 aaKnown RBP12.87□□□□□ -0.35
SMAD6-204ENST00000559931 DOLPP1Q86YN1 238 aa12.87□□□□□ -0.35
SMAD6-204ENST00000559931 GALNT11Q8NCW6 608 aa12.87□□□□□ -0.35
SMAD6-204ENST00000559931 OR4K5Q8NGD3 323 aa12.87□□□□□ -0.35
SMAD6-204ENST00000559931 MFSD8Q8NHS3 518 aa12.87□□□□□ -0.35
SMAD6-204ENST00000559931 ZPLD1Q8TCW7 415 aa12.87□□□□□ -0.35
SMAD6-204ENST00000559931 MIB2Q96AX9 1013 aa12.87□□□□□ -0.35
SMAD6-204ENST00000559931 SGTBQ96EQ0 304 aa12.87□□□□□ -0.35
SMAD6-204ENST00000559931 ZNF845Q96IR2 970 aaPredicted RBP12.87□□□□□ -0.35
SMAD6-204ENST00000559931 NAA11Q9BSU3 229 aaPredicted RBP12.87□□□□□ -0.35
SMAD6-204ENST00000559931 ZNF426Q9BUY5 554 aa12.87□□□□□ -0.35
SMAD6-204ENST00000559931 ASPNQ9BXN1 380 aa12.87□□□□□ -0.35
SMAD6-204ENST00000559931 SEMA6AQ9H2E6 1030 aa12.87□□□□□ -0.35
SMAD6-204ENST00000559931 TP63Q9H3D4 680 aaPredicted RBP12.87□□□□□ -0.35
SMAD6-204ENST00000559931 VNN3Q9NY84 501 aa12.87□□□□□ -0.35
SMAD6-204ENST00000559931 MCTS1Q9ULC4 181 aaKnown RBP12.87□□□□□ -0.35
SMAD6-204ENST00000559931 ZNF835Q9Y2P0 537 aa12.87□□□□□ -0.35
SMAD6-204ENST00000559931 RRP15Q9Y3B9 282 aaKnown RBP12.87□□□□□ -0.35
SMAD6-204ENST00000559931 FASNP49327 2511 aaKnown RBP12.86□□□□□ -0.35
SMAD6-204ENST00000559931 SH3PXD2BA1X283 911 aa12.86□□□□□ -0.35
SMAD6-204ENST00000559931 LIPT2A6NK58 231 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms