RNA–Protein interactions for RNA: ENST00000553309.5

ATXN3-218, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,022 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-218ENST00000553309 SLC47A2Q86VL8 602 aa4.31□□□□□ -1.72
ATXN3-218ENST00000553309 GPBP1Q86WP2 473 aa4.31□□□□□ -1.72
ATXN3-218ENST00000553309 GKN2Q86XP6 184 aa4.31□□□□□ -1.72
ATXN3-218ENST00000553309 HIPK1Q86Z02 1210 aa4.31□□□□□ -1.72
ATXN3-218ENST00000553309 MICU2Q8IYU8 434 aa4.31□□□□□ -1.72
ATXN3-218ENST00000553309 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.31□□□□□ -1.72
ATXN3-218ENST00000553309 SLC37A3Q8NCC5 494 aa4.31□□□□□ -1.72
ATXN3-218ENST00000553309 TRPV3Q8NET8 790 aa4.31□□□□□ -1.72
ATXN3-218ENST00000553309 GRHL3Q8TE85 626 aa4.31□□□□□ -1.72
ATXN3-218ENST00000553309 CT55Q8WUE5 264 aa4.31□□□□□ -1.72
ATXN3-218ENST00000553309 TRUB1Q8WWH5 349 aaKnown RBP4.31□□□□□ -1.72
ATXN3-218ENST00000553309 SLC13A3Q8WWT9 602 aa4.31□□□□□ -1.72
ATXN3-218ENST00000553309 SLC5A11Q8WWX8 675 aa4.31□□□□□ -1.72
ATXN3-218ENST00000553309 METTL21AQ8WXB1 218 aa4.31□□□□□ -1.72
ATXN3-218ENST00000553309 PYDC1Q8WXC3 89 aa4.31□□□□□ -1.72
ATXN3-218ENST00000553309 TMEM190Q8WZ59 177 aa4.31□□□□□ -1.72
ATXN3-218ENST00000553309 KRT35Q92764 455 aa4.31□□□□□ -1.72
ATXN3-218ENST00000553309 RFT1Q96AA3 541 aa4.31□□□□□ -1.72
ATXN3-218ENST00000553309 NTAN1Q96AB6 310 aa4.31□□□□□ -1.72
ATXN3-218ENST00000553309 FAM71F1Q96KD3 344 aaPredicted RBP4.31□□□□□ -1.72
ATXN3-218ENST00000553309 C18orf12Q96KH6 178 aa4.31□□□□□ -1.72
ATXN3-218ENST00000553309 ZIM3Q96PE6 472 aa4.31□□□□□ -1.72
ATXN3-218ENST00000553309 CYTH2Q99418 400 aa4.31□□□□□ -1.72
ATXN3-218ENST00000553309 C12orf57Q99622 126 aa4.31□□□□□ -1.72
ATXN3-218ENST00000553309 NAPGQ99747 312 aaPredicted RBP4.31□□□□□ -1.72
ATXN3-218ENST00000553309 MROQ9BYG7 248 aa4.31□□□□□ -1.72
ATXN3-218ENST00000553309 MRPS26Q9BYN8 205 aaKnown RBP4.31□□□□□ -1.72
ATXN3-218ENST00000553309 MRPL37Q9BZE1 423 aaKnown RBP4.31□□□□□ -1.72
ATXN3-218ENST00000553309 ULBP3Q9BZM4 244 aa4.31□□□□□ -1.72
ATXN3-218ENST00000553309 SLC19A3Q9BZV2 496 aa4.31□□□□□ -1.72
ATXN3-218ENST00000553309 LIME1Q9H400 295 aa4.31□□□□□ -1.72
ATXN3-218ENST00000553309 ACTL8Q9H568 366 aa4.31□□□□□ -1.72
ATXN3-218ENST00000553309 RMND5AQ9H871 391 aa4.31□□□□□ -1.72
ATXN3-218ENST00000553309 PDE7BQ9NP56 450 aa4.31□□□□□ -1.72
ATXN3-218ENST00000553309 AGPAT4Q9NRZ5 378 aa4.31□□□□□ -1.72
ATXN3-218ENST00000553309 PLCXD1Q9NUJ7 323 aa4.31□□□□□ -1.72
ATXN3-218ENST00000553309 FGFR1OP2Q9NVK5 253 aa4.31□□□□□ -1.72
ATXN3-218ENST00000553309 ADPRHL2Q9NX46 363 aa4.31□□□□□ -1.72
ATXN3-218ENST00000553309 PSMC3IPQ9P2W1 217 aaPredicted RBP4.31□□□□□ -1.72
ATXN3-218ENST00000553309 SLC12A6Q9UHW9 1150 aa4.31□□□□□ -1.72
ATXN3-218ENST00000553309 SLC24A2Q9UI40 661 aa4.31□□□□□ -1.72
ATXN3-218ENST00000553309 SLC22A14Q9Y267 594 aa4.31□□□□□ -1.72
ATXN3-218ENST00000553309 TGP01266 2768 aa4.31□□□□□ -1.72
ATXN3-218ENST00000553309 TRPM6Q9BX84 2022 aa4.31□□□□□ -1.72
ATXN3-218ENST00000553309 PKD1L1Q8TDX9 2849 aa4.31□□□□□ -1.72
ATXN3-218ENST00000553309 CUBNO60494 3623 aa4.31□□□□□ -1.72
ATXN3-218ENST00000553309 TEX13DA0A0J9YY54 714 aaPredicted RBP4.3□□□□□ -1.72
ATXN3-218ENST00000553309 LOC100506127A0A0U1RQW1 187 aa4.3□□□□□ -1.72
ATXN3-218ENST00000553309 MYO1GB0I1T2 1018 aa4.3□□□□□ -1.72
ATXN3-218ENST00000553309 LINC00587B1AMM8 73 aa4.3□□□□□ -1.72
ATXN3-218ENST00000553309 ZNF487B1APH4 448 aa4.3□□□□□ -1.72
ATXN3-218ENST00000553309 CCL21O00585 134 aa4.3□□□□□ -1.72
ATXN3-218ENST00000553309 DNALI1O14645 258 aaPredicted RBP4.3□□□□□ -1.72
ATXN3-218ENST00000553309 CLIC2O15247 247 aa4.3□□□□□ -1.72
ATXN3-218ENST00000553309 CCNB2O95067 398 aa4.3□□□□□ -1.72
ATXN3-218ENST00000553309 PGM3O95394 542 aa4.3□□□□□ -1.72
ATXN3-218ENST00000553309 NSA2O95478 260 aaKnown RBP4.3□□□□□ -1.72
ATXN3-218ENST00000553309 TNNC2P02585 160 aa4.3□□□□□ -1.72
ATXN3-218ENST00000553309 FABP1P07148 127 aa4.3□□□□□ -1.72
ATXN3-218ENST00000553309 ZCCHC18P0CG32 403 aa4.3□□□□□ -1.72
ATXN3-218ENST00000553309 COX5BP10606 129 aa4.3□□□□□ -1.72
ATXN3-218ENST00000553309 S100PP25815 95 aa4.3□□□□□ -1.72
ATXN3-218ENST00000553309 EEF1DP29692 281 aaKnown RBP4.3□□□□□ -1.72
ATXN3-218ENST00000553309 MEOX2P50222 304 aa4.3□□□□□ -1.72
ATXN3-218ENST00000553309 SERPINB9P50453 376 aa4.3□□□□□ -1.72
ATXN3-218ENST00000553309 RAB13P51153 203 aa4.3□□□□□ -1.72
ATXN3-218ENST00000553309 VAMP7P51809 220 aa4.3□□□□□ -1.72
ATXN3-218ENST00000553309 RIDAP52758 137 aaKnown RBP4.3□□□□□ -1.72
ATXN3-218ENST00000553309 CASP9P55211 416 aa4.3□□□□□ -1.72
ATXN3-218ENST00000553309 RPS21P63220 83 aaKnown RBP4.3□□□□□ -1.72
ATXN3-218ENST00000553309 ARF5P84085 180 aa4.3□□□□□ -1.72
ATXN3-218ENST00000553309 GALK2Q01415 458 aa4.3□□□□□ -1.72
ATXN3-218ENST00000553309 ABRQ12979 859 aa4.3□□□□□ -1.72
ATXN3-218ENST00000553309 TRA2AQ13595 282 aaKnown RBP eCLIP4.3□□□□□ -1.72
ATXN3-218ENST00000553309 ZNF674Q2M3X9 581 aa4.3□□□□□ -1.72
ATXN3-218ENST00000553309 TRIM16LQ309B1 348 aa4.3□□□□□ -1.72
ATXN3-218ENST00000553309 IQCCQ4KMZ1 466 aa4.3□□□□□ -1.72
ATXN3-218ENST00000553309 CDKL4Q5MAI5 379 aa4.3□□□□□ -1.72
ATXN3-218ENST00000553309 ERMARDQ5T6L9 678 aa4.3□□□□□ -1.72
ATXN3-218ENST00000553309 ELP2Q6IA86 826 aa4.3□□□□□ -1.72
ATXN3-218ENST00000553309 SLC25A24Q6NUK1 477 aa4.3□□□□□ -1.72
ATXN3-218ENST00000553309 SCYL2Q6P3W7 929 aa4.3□□□□□ -1.72
ATXN3-218ENST00000553309 LRRC74BQ6ZQY2 392 aa4.3□□□□□ -1.72
ATXN3-218ENST00000553309 CLEC20AQ6ZU45 233 aa4.3□□□□□ -1.72
ATXN3-218ENST00000553309 ERN2Q76MJ5 926 aaKnown RBP4.3□□□□□ -1.72
ATXN3-218ENST00000553309 TAF8Q7Z7C8 310 aa4.3□□□□□ -1.72
ATXN3-218ENST00000553309 OR8H3Q8N146 312 aa4.3□□□□□ -1.72
ATXN3-218ENST00000553309 MMGT1Q8N4V1 131 aa4.3□□□□□ -1.72
ATXN3-218ENST00000553309 EIF1ADQ8N9N8 165 aaKnown RBP4.3□□□□□ -1.72
ATXN3-218ENST00000553309 TTC29Q8NA56 475 aaPredicted RBP4.3□□□□□ -1.72
ATXN3-218ENST00000553309 FNDC5Q8NAU1 212 aa4.3□□□□□ -1.72
ATXN3-218ENST00000553309 CCL4L1Q8NHW4 92 aa4.3□□□□□ -1.72
ATXN3-218ENST00000553309 FIBINQ8TAL6 211 aa4.3□□□□□ -1.72
ATXN3-218ENST00000553309 LRRC20Q8TCA0 184 aa4.3□□□□□ -1.72
ATXN3-218ENST00000553309 UBLCP1Q8WVY7 318 aaPredicted RBP4.3□□□□□ -1.72
ATXN3-218ENST00000553309 SMPDL3BQ92485 455 aa4.3□□□□□ -1.72
ATXN3-218ENST00000553309 SEMA4DQ92854 862 aa4.3□□□□□ -1.72
ATXN3-218ENST00000553309 ELMO2Q96JJ3 720 aa4.3□□□□□ -1.72
ATXN3-218ENST00000553309 PPP1R36Q96LQ0 422 aa4.3□□□□□ -1.72
ATXN3-218ENST00000553309 C9orf72Q96LT7 481 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms