RNA–Protein interactions for RNA: ENST00000548277.1

TRAFD1-205, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-205ENST00000548277 TUBA4AP68366 448 aa10.44□□□□□ -0.74
TRAFD1-205ENST00000548277 KCNJ10P78508 379 aa10.44□□□□□ -0.74
TRAFD1-205ENST00000548277 MAD2L1Q13257 205 aaPredicted RBP10.44□□□□□ -0.74
TRAFD1-205ENST00000548277 SWI5Q1ZZU3 235 aa10.44□□□□□ -0.74
TRAFD1-205ENST00000548277 ATAD3BQ5T9A4 648 aa10.44□□□□□ -0.74
TRAFD1-205ENST00000548277 KLHL24Q6TFL4 600 aa10.44□□□□□ -0.74
TRAFD1-205ENST00000548277 TUBA1AQ71U36 451 aa10.44□□□□□ -0.74
TRAFD1-205ENST00000548277 SLC46A3Q7Z3Q1 461 aa10.44□□□□□ -0.74
TRAFD1-205ENST00000548277 TMEM99Q8N816 258 aa10.44□□□□□ -0.74
TRAFD1-205ENST00000548277 ZNF781Q8N8C0 355 aa10.44□□□□□ -0.74
TRAFD1-205ENST00000548277 CNOT9Q92600 299 aaKnown RBP10.44□□□□□ -0.74
TRAFD1-205ENST00000548277 ROPN1LQ96C74 230 aa10.44□□□□□ -0.74
TRAFD1-205ENST00000548277 AURKBQ96GD4 344 aaPredicted RBP10.44□□□□□ -0.74
TRAFD1-205ENST00000548277 C1orf159Q96HA4 380 aa10.44□□□□□ -0.74
TRAFD1-205ENST00000548277 NAA11Q9BSU3 229 aaPredicted RBP10.44□□□□□ -0.74
TRAFD1-205ENST00000548277 SOX7Q9BT81 388 aa10.44□□□□□ -0.74
TRAFD1-205ENST00000548277 C20orf27Q9GZN8 174 aa10.44□□□□□ -0.74
TRAFD1-205ENST00000548277 ZNF350Q9GZX5 532 aa10.44□□□□□ -0.74
TRAFD1-205ENST00000548277 CENPHQ9H3R5 247 aa10.44□□□□□ -0.74
TRAFD1-205ENST00000548277 AKTIPQ9H8T0 292 aa10.44□□□□□ -0.74
TRAFD1-205ENST00000548277 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.44□□□□□ -0.74
TRAFD1-205ENST00000548277 PARPBPQ9NWS1 579 aa10.44□□□□□ -0.74
TRAFD1-205ENST00000548277 MALT1Q9UDY8 824 aa10.44□□□□□ -0.74
TRAFD1-205ENST00000548277 TMED7Q9Y3B3 224 aa10.44□□□□□ -0.74
TRAFD1-205ENST00000548277 FKBP7Q9Y680 259 aa10.44□□□□□ -0.74
TRAFD1-205ENST00000548277 SH3PXD2BA1X283 911 aa10.43□□□□□ -0.74
TRAFD1-205ENST00000548277 ZC3H12DA2A288 527 aaKnown RBP10.43□□□□□ -0.74
TRAFD1-205ENST00000548277 PDLIM1O00151 329 aa10.43□□□□□ -0.74
TRAFD1-205ENST00000548277 NR5A2O00482 541 aa10.43□□□□□ -0.74
TRAFD1-205ENST00000548277 BIRC5O15392 142 aa10.43□□□□□ -0.74
TRAFD1-205ENST00000548277 SCN2BO60939 215 aa10.43□□□□□ -0.74
TRAFD1-205ENST00000548277 AKR7A3O95154 331 aa10.43□□□□□ -0.74
TRAFD1-205ENST00000548277 WNT11O96014 354 aa10.43□□□□□ -0.74
TRAFD1-205ENST00000548277 AK1P00568 194 aa10.43□□□□□ -0.74
TRAFD1-205ENST00000548277 HNF1AP20823 631 aa10.43□□□□□ -0.74
TRAFD1-205ENST00000548277 TACR3P29371 465 aa10.43□□□□□ -0.74
TRAFD1-205ENST00000548277 SLC16A1P53985 500 aa10.43□□□□□ -0.74
TRAFD1-205ENST00000548277 SNRPD2P62316 118 aaKnown RBP10.43□□□□□ -0.74
TRAFD1-205ENST00000548277 SLC35A1P78382 337 aa10.43□□□□□ -0.74
TRAFD1-205ENST00000548277 TGFBR3Q03167 851 aa10.43□□□□□ -0.74
TRAFD1-205ENST00000548277 LGALS3BPQ08380 585 aa10.43□□□□□ -0.74
TRAFD1-205ENST00000548277 FUT5Q11128 374 aa10.43□□□□□ -0.74
TRAFD1-205ENST00000548277 CR1LQ2VPA4 569 aa10.43□□□□□ -0.74
TRAFD1-205ENST00000548277 OTUD3Q5T2D3 398 aaPredicted RBP10.43□□□□□ -0.74
TRAFD1-205ENST00000548277 LIPNQ5VXI9 398 aa10.43□□□□□ -0.74
TRAFD1-205ENST00000548277 FRRS1Q6ZNA5 592 aa10.43□□□□□ -0.74
TRAFD1-205ENST00000548277 AAED1Q7RTV5 226 aa10.43□□□□□ -0.74
TRAFD1-205ENST00000548277 GPAT4Q86UL3 456 aa10.43□□□□□ -0.74
TRAFD1-205ENST00000548277 DDIT4LQ96D03 193 aa10.43□□□□□ -0.74
TRAFD1-205ENST00000548277 ZNF385AQ96PM9 386 aaKnown RBP10.43□□□□□ -0.74
TRAFD1-205ENST00000548277 KCNS3Q9BQ31 491 aa10.43□□□□□ -0.74
TRAFD1-205ENST00000548277 SSU72Q9NP77 194 aaKnown RBP10.43□□□□□ -0.74
TRAFD1-205ENST00000548277 KCNK9Q9NPC2 374 aa10.43□□□□□ -0.74
TRAFD1-205ENST00000548277 NOP53Q9NZM5 478 aaKnown RBP10.43□□□□□ -0.74
TRAFD1-205ENST00000548277 DCTN4Q9UJW0 460 aa10.43□□□□□ -0.74
TRAFD1-205ENST00000548277 OSGIN1Q9UJX0 560 aa10.43□□□□□ -0.74
TRAFD1-205ENST00000548277 SLC35A3Q9Y2D2 325 aa10.43□□□□□ -0.74
TRAFD1-205ENST00000548277 RAP2CQ9Y3L5 183 aa10.43□□□□□ -0.74
TRAFD1-205ENST00000548277 IGHV1-18A0A0C4DH31 117 aa10.42□□□□□ -0.74
TRAFD1-205ENST00000548277 PRAMEF27A3QJZ7 478 aa10.42□□□□□ -0.74
TRAFD1-205ENST00000548277 TM9SF1O15321 606 aa10.42□□□□□ -0.74
TRAFD1-205ENST00000548277 LGI1O95970 557 aa10.42□□□□□ -0.74
TRAFD1-205ENST00000548277 MYZAPP0CAP1 466 aa10.42□□□□□ -0.74
TRAFD1-205ENST00000548277 BGNP21810 368 aa10.42□□□□□ -0.74
TRAFD1-205ENST00000548277 UQCRC2P22695 453 aa10.42□□□□□ -0.74
TRAFD1-205ENST00000548277 MPGP29372 298 aa10.42□□□□□ -0.74
TRAFD1-205ENST00000548277 CHI3L1P36222 383 aaPredicted RBP10.42□□□□□ -0.74
TRAFD1-205ENST00000548277 SERPINF1P36955 418 aa10.42□□□□□ -0.74
TRAFD1-205ENST00000548277 SLC1A6P48664 564 aa10.42□□□□□ -0.74
TRAFD1-205ENST00000548277 RPL14P50914 215 aaKnown RBP10.42□□□□□ -0.74
TRAFD1-205ENST00000548277 PLAURQ03405 335 aa10.42□□□□□ -0.74
TRAFD1-205ENST00000548277 BNIP2Q12982 314 aa10.42□□□□□ -0.74
TRAFD1-205ENST00000548277 CEACAM7Q14002 265 aa10.42□□□□□ -0.74
TRAFD1-205ENST00000548277 MPP2Q14168 576 aa10.42□□□□□ -0.74
TRAFD1-205ENST00000548277 SLC17A1Q14916 467 aa10.42□□□□□ -0.74
TRAFD1-205ENST00000548277 OR7A5Q15622 319 aa10.42□□□□□ -0.74
TRAFD1-205ENST00000548277 SYPL1Q16563 259 aa10.42□□□□□ -0.74
TRAFD1-205ENST00000548277 SMU1Q2TAY7 513 aa10.42□□□□□ -0.74
TRAFD1-205ENST00000548277 CEP85LQ5SZL2 805 aa10.42□□□□□ -0.74
TRAFD1-205ENST00000548277 ZCCHC24Q8N2G6 241 aaKnown RBP10.42□□□□□ -0.74
TRAFD1-205ENST00000548277 ZIM3Q96PE6 472 aa10.42□□□□□ -0.74
TRAFD1-205ENST00000548277 SORT1Q99523 831 aa10.42□□□□□ -0.74
TRAFD1-205ENST00000548277 DPY30Q9C005 99 aa10.42□□□□□ -0.74
TRAFD1-205ENST00000548277 BPESC1Q9GZL8 116 aa10.42□□□□□ -0.74
TRAFD1-205ENST00000548277 ASIC5Q9NY37 505 aa10.42□□□□□ -0.74
TRAFD1-205ENST00000548277 MARCOQ9UEW3 520 aaPredicted RBP10.42□□□□□ -0.74
TRAFD1-205ENST00000548277 TRAPPC4Q9Y296 219 aa10.42□□□□□ -0.74
TRAFD1-205ENST00000548277 SLC9A8Q9Y2E8 581 aa10.42□□□□□ -0.74
TRAFD1-205ENST00000548277 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.42□□□□□ -0.74
TRAFD1-205ENST00000548277 A0A096LPE4 126 aa10.41□□□□□ -0.74
TRAFD1-205ENST00000548277 A0A1W2PPZ6 126 aa10.41□□□□□ -0.74
TRAFD1-205ENST00000548277 LOC390937A0A1W2PQ73 354 aa10.41□□□□□ -0.74
TRAFD1-205ENST00000548277 RNASET2O00584 256 aaKnown RBP10.41□□□□□ -0.74
TRAFD1-205ENST00000548277 ZNF500O60304 480 aaPredicted RBP10.41□□□□□ -0.74
TRAFD1-205ENST00000548277 OR4A8P0C604 315 aa10.41□□□□□ -0.74
TRAFD1-205ENST00000548277 IL2RGP31785 369 aa10.41□□□□□ -0.74
TRAFD1-205ENST00000548277 SRP14P37108 136 aaKnown RBP10.41□□□□□ -0.74
TRAFD1-205ENST00000548277 CLK1P49759 484 aaKnown RBP10.41□□□□□ -0.74
TRAFD1-205ENST00000548277 POLR2HP52434 150 aaKnown RBP10.41□□□□□ -0.74
TRAFD1-205ENST00000548277 NME5P56597 212 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms