RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 SCN5AQ14524 2016 aa13.09□□□□□ -0.31
SRP54-202ENST00000546080 LYPD3O95274 346 aa13.08□□□□□ -0.31
SRP54-202ENST00000546080 PLATP00750 562 aa13.08□□□□□ -0.31
SRP54-202ENST00000546080 PTHLHP12272 177 aa13.08□□□□□ -0.31
SRP54-202ENST00000546080 LAMP2P13473 410 aa13.08□□□□□ -0.31
SRP54-202ENST00000546080 ZNF35P13682 527 aa13.08□□□□□ -0.31
SRP54-202ENST00000546080 ADRB3P13945 408 aa13.08□□□□□ -0.31
SRP54-202ENST00000546080 PPP2CBP62714 309 aa13.08□□□□□ -0.31
SRP54-202ENST00000546080 PPP2CAP67775 309 aa13.08□□□□□ -0.31
SRP54-202ENST00000546080 OC90Q02509 493 aaPredicted RBP13.08□□□□□ -0.31
SRP54-202ENST00000546080 IL10RAQ13651 578 aa13.08□□□□□ -0.31
SRP54-202ENST00000546080 DUSP5Q16690 384 aa13.08□□□□□ -0.31
SRP54-202ENST00000546080 MRPL2Q5T653 305 aaKnown RBP13.08□□□□□ -0.31
SRP54-202ENST00000546080 ARHGAP11AQ6P4F7 1023 aa13.08□□□□□ -0.31
SRP54-202ENST00000546080 ATRAIDQ6UW56 229 aa13.08□□□□□ -0.31
SRP54-202ENST00000546080 UNQ9370/PRO34162Q6UXP9 181 aa13.08□□□□□ -0.31
SRP54-202ENST00000546080 SLC35F2Q8IXU6 374 aa13.08□□□□□ -0.31
SRP54-202ENST00000546080 SDR16C5Q8N3Y7 309 aa13.08□□□□□ -0.31
SRP54-202ENST00000546080 CLRN3Q8NCR9 226 aa13.08□□□□□ -0.31
SRP54-202ENST00000546080 DNAAF1Q8NEP3 725 aa13.08□□□□□ -0.31
SRP54-202ENST00000546080 OR5M9Q8NGP3 310 aa13.08□□□□□ -0.31
SRP54-202ENST00000546080 PHYHIPQ92561 330 aa13.08□□□□□ -0.31
SRP54-202ENST00000546080 MRPS24Q96EL2 167 aaKnown RBP13.08□□□□□ -0.31
SRP54-202ENST00000546080 DMRTA2Q96SC8 542 aa13.08□□□□□ -0.31
SRP54-202ENST00000546080 SLC6A20Q9NP91 592 aa13.08□□□□□ -0.31
SRP54-202ENST00000546080 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.08□□□□□ -0.31
SRP54-202ENST00000546080 ANKRD10Q9NXR5 420 aa13.08□□□□□ -0.31
SRP54-202ENST00000546080 A0A1B0GW55 424 aa13.08□□□□□ -0.32
SRP54-202ENST00000546080 ACOD1A6NK06 481 aa13.08□□□□□ -0.32
SRP54-202ENST00000546080 F5H5P2 479 aa13.08□□□□□ -0.32
SRP54-202ENST00000546080 PYCARD-AS1I3L0S3 204 aa13.08□□□□□ -0.32
SRP54-202ENST00000546080 FMO6PO60774 539 aa13.08□□□□□ -0.32
SRP54-202ENST00000546080 PCDH8O95206 1070 aa13.08□□□□□ -0.32
SRP54-202ENST00000546080 CD1AP06126 327 aa13.08□□□□□ -0.32
SRP54-202ENST00000546080 RAB40ALP0C0E4 278 aa13.08□□□□□ -0.32
SRP54-202ENST00000546080 DUX4L2P0CJ85 424 aa13.08□□□□□ -0.32
SRP54-202ENST00000546080 DUX4L3P0CJ86 424 aa13.08□□□□□ -0.32
SRP54-202ENST00000546080 DUX4L4P0CJ87 422 aa13.08□□□□□ -0.32
SRP54-202ENST00000546080 DUX4L5P0CJ88 424 aa13.08□□□□□ -0.32
SRP54-202ENST00000546080 DUX4L6P0CJ89 424 aa13.08□□□□□ -0.32
SRP54-202ENST00000546080 DUX4L7P0CJ90 424 aa13.08□□□□□ -0.32
SRP54-202ENST00000546080 PSMB10P40306 273 aa13.08□□□□□ -0.32
SRP54-202ENST00000546080 GMFBP60983 142 aa13.08□□□□□ -0.32
SRP54-202ENST00000546080 SREBF2Q12772 1141 aa13.08□□□□□ -0.32
SRP54-202ENST00000546080 ILF3Q12906 894 aaKnown RBP eCLIP13.08□□□□□ -0.328e-7■■■□□ 18.6
SRP54-202ENST00000546080 GAS6Q14393 721 aa13.08□□□□□ -0.32
SRP54-202ENST00000546080 UBXN2BQ14CS0 331 aa13.08□□□□□ -0.32
SRP54-202ENST00000546080 ZDHHC1Q8WTX9 485 aa13.08□□□□□ -0.32
SRP54-202ENST00000546080 RAB40AQ8WXH6 277 aa13.08□□□□□ -0.32
SRP54-202ENST00000546080 TCEAL4Q96EI5 215 aa13.08□□□□□ -0.32
SRP54-202ENST00000546080 COX14Q96I36 57 aa13.08□□□□□ -0.32
SRP54-202ENST00000546080 SDF2Q99470 211 aa13.08□□□□□ -0.32
SRP54-202ENST00000546080 SLC38A3Q99624 504 aa13.08□□□□□ -0.32
SRP54-202ENST00000546080 EVA1AQ9H8M9 152 aa13.08□□□□□ -0.32
SRP54-202ENST00000546080 USP36Q9P275 1121 aaKnown RBP13.08□□□□□ -0.32
SRP54-202ENST00000546080 DUX4Q9UBX2 424 aa13.08□□□□□ -0.32
SRP54-202ENST00000546080 PRELID3BQ9Y3B1 194 aa13.08□□□□□ -0.32
SRP54-202ENST00000546080 ZNF175Q9Y473 711 aa13.08□□□□□ -0.32
SRP54-202ENST00000546080 A0A1B0GTQ1 180 aa13.07□□□□□ -0.32
SRP54-202ENST00000546080 DNASE2O00115 360 aaPredicted RBP13.07□□□□□ -0.32
SRP54-202ENST00000546080 GOSR2O14653 212 aa13.07□□□□□ -0.32
SRP54-202ENST00000546080 PIN1P1O15428 100 aa13.07□□□□□ -0.32
SRP54-202ENST00000546080 GPRIN2O60269 458 aa13.07□□□□□ -0.32
SRP54-202ENST00000546080 AQP8O94778 261 aa13.07□□□□□ -0.32
SRP54-202ENST00000546080 PCCBP05166 539 aa13.07□□□□□ -0.32
SRP54-202ENST00000546080 DBIP07108 87 aaKnown RBP13.07□□□□□ -0.32
SRP54-202ENST00000546080 CDK2P24941 298 aa13.07□□□□□ -0.32
SRP54-202ENST00000546080 SLC6A6P31641 620 aa13.07□□□□□ -0.32
SRP54-202ENST00000546080 RAB28P51157 221 aa13.07□□□□□ -0.32
SRP54-202ENST00000546080 H2BFSP57053 126 aa13.07□□□□□ -0.32
SRP54-202ENST00000546080 MAT1AQ00266 395 aaKnown RBP13.07□□□□□ -0.32
SRP54-202ENST00000546080 TEAD2Q15562 447 aa13.07□□□□□ -0.32
SRP54-202ENST00000546080 NDUFAF6Q330K2 333 aa13.07□□□□□ -0.32
SRP54-202ENST00000546080 SHEQ5VZ18 495 aa13.07□□□□□ -0.32
SRP54-202ENST00000546080 ZNF660Q6AZW8 331 aaPredicted RBP13.07□□□□□ -0.32
SRP54-202ENST00000546080 ERN2Q76MJ5 926 aaKnown RBP13.07□□□□□ -0.32
SRP54-202ENST00000546080 ZNF619Q8N2I2 560 aa13.07□□□□□ -0.32
SRP54-202ENST00000546080 LRRC25Q8N386 305 aaPredicted RBP13.07□□□□□ -0.32
SRP54-202ENST00000546080 POMGNT2Q8NAT1 580 aa13.07□□□□□ -0.32
SRP54-202ENST00000546080 SDR9C7Q8NEX9 313 aa13.07□□□□□ -0.32
SRP54-202ENST00000546080 OR52E2Q8NGJ4 325 aa13.07□□□□□ -0.32
SRP54-202ENST00000546080 OR51L1Q8NGJ5 315 aa13.07□□□□□ -0.32
SRP54-202ENST00000546080 SP7Q8TDD2 431 aaPredicted RBP13.07□□□□□ -0.32
SRP54-202ENST00000546080 NPAS1Q99742 590 aa13.07□□□□□ -0.32
SRP54-202ENST00000546080 CCDC86Q9H6F5 360 aaKnown RBP13.07□□□□□ -0.32
SRP54-202ENST00000546080 PRSS16Q9NQE7 514 aa13.07□□□□□ -0.32
SRP54-202ENST00000546080 EXOSC3Q9NQT5 275 aaKnown RBP13.07□□□□□ -0.32
SRP54-202ENST00000546080 V9GY05 133 aa13.07□□□□□ -0.32
SRP54-202ENST00000546080 SELENOFO60613 162 aa13.07□□□□□ -0.32
SRP54-202ENST00000546080 PTP4A3O75365 173 aa13.07□□□□□ -0.32
SRP54-202ENST00000546080 SPDEFO95238 335 aa13.07□□□□□ -0.32
SRP54-202ENST00000546080 HPP00738 406 aa13.07□□□□□ -0.32
SRP54-202ENST00000546080 VSIG10L2P0DP72 767 aa13.07□□□□□ -0.32
SRP54-202ENST00000546080 FAUP35544 74 aaKnown RBP13.07□□□□□ -0.32
SRP54-202ENST00000546080 TAS2R20P59543 309 aa13.07□□□□□ -0.32
SRP54-202ENST00000546080 CBFBQ13951 182 aa13.07□□□□□ -0.32
SRP54-202ENST00000546080 PWWP2BQ6NUJ5 590 aa13.07□□□□□ -0.32
SRP54-202ENST00000546080 GRHL3Q8TE85 626 aa13.07□□□□□ -0.32
SRP54-202ENST00000546080 C15orf40Q8WUR7 153 aa13.07□□□□□ -0.32
SRP54-202ENST00000546080 HAVCR1Q96D42 359 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms