RNA–Protein interactions for RNA: ENST00000546033.1

PTP4A1P2-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 2, humanhuman

BASIC

Gene PTP4A1P2, Length 454 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P2-201ENST00000546033 STK35Q8TDR2 534 aa13.62□□□□□ -0.23
PTP4A1P2-201ENST00000546033 DNAJA4Q8WW22 397 aaPredicted RBP13.62□□□□□ -0.23
PTP4A1P2-201ENST00000546033 APH1AQ96BI3 265 aa13.62□□□□□ -0.23
PTP4A1P2-201ENST00000546033 C3orf49Q96BT1 292 aa13.62□□□□□ -0.23
PTP4A1P2-201ENST00000546033 TRIM2Q9C040 744 aa13.62□□□□□ -0.23
PTP4A1P2-201ENST00000546033 C12orf10Q9HB07 376 aa13.62□□□□□ -0.23
PTP4A1P2-201ENST00000546033 TMEM27Q9HBJ8 222 aa13.62□□□□□ -0.23
PTP4A1P2-201ENST00000546033 SAR1AQ9NR31 198 aa13.62□□□□□ -0.23
PTP4A1P2-201ENST00000546033 PARPBPQ9NWS1 579 aa13.62□□□□□ -0.23
PTP4A1P2-201ENST00000546033 GID8Q9NWU2 228 aa13.62□□□□□ -0.23
PTP4A1P2-201ENST00000546033 TESQ9UGI8 421 aaKnown RBP13.62□□□□□ -0.23
PTP4A1P2-201ENST00000546033 SLC9A8Q9Y2E8 581 aa13.62□□□□□ -0.23
PTP4A1P2-201ENST00000546033 CHST2Q9Y4C5 530 aa13.62□□□□□ -0.23
PTP4A1P2-201ENST00000546033 CAPN7Q9Y6W3 813 aa13.62□□□□□ -0.23
PTP4A1P2-201ENST00000546033 CSMD2Q7Z408 3487 aa13.62□□□□□ -0.23
PTP4A1P2-201ENST00000546033 LIPT2A6NK58 231 aa13.61□□□□□ -0.23
PTP4A1P2-201ENST00000546033 ZNF716A6NP11 495 aa13.61□□□□□ -0.23
PTP4A1P2-201ENST00000546033 MRASO14807 208 aa13.61□□□□□ -0.23
PTP4A1P2-201ENST00000546033 SLC22A2O15244 555 aa13.61□□□□□ -0.23
PTP4A1P2-201ENST00000546033 AHSA1O95433 338 aa13.61□□□□□ -0.23
PTP4A1P2-201ENST00000546033 PNMTP11086 282 aa13.61□□□□□ -0.23
PTP4A1P2-201ENST00000546033 IMPDH2P12268 514 aa13.61□□□□□ -0.23
PTP4A1P2-201ENST00000546033 KLK2P20151 261 aa13.61□□□□□ -0.23
PTP4A1P2-201ENST00000546033 GTF2E2P29084 291 aaKnown RBP13.61□□□□□ -0.23
PTP4A1P2-201ENST00000546033 NR1H2P55055 460 aa13.61□□□□□ -0.23
PTP4A1P2-201ENST00000546033 RGS8P57771 180 aaPredicted RBP13.61□□□□□ -0.23
PTP4A1P2-201ENST00000546033 H3F3AP84243 136 aa13.61□□□□□ -0.23
PTP4A1P2-201ENST00000546033 BNIP2Q12982 314 aa13.61□□□□□ -0.23
PTP4A1P2-201ENST00000546033 CAPRIN1Q14444 709 aaKnown RBP13.61□□□□□ -0.23
PTP4A1P2-201ENST00000546033 OTUD3Q5T2D3 398 aaPredicted RBP13.61□□□□□ -0.23
PTP4A1P2-201ENST00000546033 C1orf140Q5VVS0 124 aa13.61□□□□□ -0.23
PTP4A1P2-201ENST00000546033 CGB2Q6NT52 195 aa13.61□□□□□ -0.23
PTP4A1P2-201ENST00000546033 C5orf46Q6UWT4 87 aa13.61□□□□□ -0.23
PTP4A1P2-201ENST00000546033 PAMR1Q6UXH9 720 aa13.61□□□□□ -0.23
PTP4A1P2-201ENST00000546033 PATL1Q86TB9 770 aaKnown RBP13.61□□□□□ -0.23
PTP4A1P2-201ENST00000546033 ATG4DQ86TL0 474 aaPredicted RBP13.61□□□□□ -0.23
PTP4A1P2-201ENST00000546033 RANBP3LQ86VV4 465 aaPredicted RBP13.61□□□□□ -0.23
PTP4A1P2-201ENST00000546033 OR52E4Q8NGH9 312 aa13.61□□□□□ -0.23
PTP4A1P2-201ENST00000546033 OR10A6Q8NH74 314 aa13.61□□□□□ -0.23
PTP4A1P2-201ENST00000546033 SLC26A7Q8TE54 656 aa13.61□□□□□ -0.23
PTP4A1P2-201ENST00000546033 HSD17B8Q92506 261 aa13.61□□□□□ -0.23
PTP4A1P2-201ENST00000546033 ECSITQ9BQ95 431 aa13.61□□□□□ -0.23
PTP4A1P2-201ENST00000546033 LIME1Q9H400 295 aa13.61□□□□□ -0.23
PTP4A1P2-201ENST00000546033 KAT8Q9H7Z6 458 aaKnown RBP13.61□□□□□ -0.23
PTP4A1P2-201ENST00000546033 PLEKHF2Q9H8W4 249 aa13.61□□□□□ -0.23
PTP4A1P2-201ENST00000546033 CCM2LQ9NUG4 571 aaPredicted RBP13.61□□□□□ -0.23
PTP4A1P2-201ENST00000546033 ADPRHL2Q9NX46 363 aa13.61□□□□□ -0.23
PTP4A1P2-201ENST00000546033 PLEKHA6Q9Y2H5 1048 aa13.61□□□□□ -0.23
PTP4A1P2-201ENST00000546033 DEFB108AA8MXU0 73 aa13.6□□□□□ -0.23
PTP4A1P2-201ENST00000546033 ZNF814B7Z6K7 855 aa13.6□□□□□ -0.23
PTP4A1P2-201ENST00000546033 FBP2O00757 339 aa13.6□□□□□ -0.23
PTP4A1P2-201ENST00000546033 TPST1O60507 370 aa13.6□□□□□ -0.23
PTP4A1P2-201ENST00000546033 AKR7A3O95154 331 aa13.6□□□□□ -0.23
PTP4A1P2-201ENST00000546033 VAMP5O95183 116 aa13.6□□□□□ -0.23
PTP4A1P2-201ENST00000546033 HOXC5Q00444 222 aa13.6□□□□□ -0.23
PTP4A1P2-201ENST00000546033 SELPLGQ14242 412 aa13.6□□□□□ -0.23
PTP4A1P2-201ENST00000546033 ALG10BQ5I7T1 473 aa13.6□□□□□ -0.23
PTP4A1P2-201ENST00000546033 TMEM225Q6GV28 225 aa13.6□□□□□ -0.23
PTP4A1P2-201ENST00000546033 NANOGP8Q6NSW7 305 aa13.6□□□□□ -0.23
PTP4A1P2-201ENST00000546033 ULK3Q6PHR2 472 aa13.6□□□□□ -0.23
PTP4A1P2-201ENST00000546033 CASP12Q6UXS9 341 aa13.6□□□□□ -0.23
PTP4A1P2-201ENST00000546033 BHLHA15Q7RTS1 189 aaPredicted RBP13.6□□□□□ -0.23
PTP4A1P2-201ENST00000546033 SSX8Q7RTT4 187 aa13.6□□□□□ -0.23
PTP4A1P2-201ENST00000546033 NET1Q7Z628 596 aaPredicted RBP13.6□□□□□ -0.23
PTP4A1P2-201ENST00000546033 SNX32Q86XE0 403 aa13.6□□□□□ -0.23
PTP4A1P2-201ENST00000546033 PTOV1Q86YD1 416 aa13.6□□□□□ -0.23
PTP4A1P2-201ENST00000546033 WFDC8Q8IUA0 241 aa13.6□□□□□ -0.23
PTP4A1P2-201ENST00000546033 LSMEM1Q8N8F7 131 aa13.6□□□□□ -0.23
PTP4A1P2-201ENST00000546033 OR8J3Q8NGG0 315 aa13.6□□□□□ -0.23
PTP4A1P2-201ENST00000546033 RNF217Q8TC41 542 aa13.6□□□□□ -0.23
PTP4A1P2-201ENST00000546033 RASSF5Q8WWW0 418 aa13.6□□□□□ -0.23
PTP4A1P2-201ENST00000546033 S100PBPQ96BU1 408 aa13.6□□□□□ -0.23
PTP4A1P2-201ENST00000546033 LRRC58Q96CX6 371 aa13.6□□□□□ -0.23
PTP4A1P2-201ENST00000546033 SF3B5Q9BWJ5 86 aaKnown RBP13.6□□□□□ -0.23
PTP4A1P2-201ENST00000546033 PIF1Q9H611 641 aa13.6□□□□□ -0.23
PTP4A1P2-201ENST00000546033 NANOGQ9H9S0 305 aa13.6□□□□□ -0.23
PTP4A1P2-201ENST00000546033 PRSS50Q9UI38 385 aa13.6□□□□□ -0.23
PTP4A1P2-201ENST00000546033 PRR14LQ5THK1 2151 aa13.59□□□□□ -0.23
PTP4A1P2-201ENST00000546033 LOC100653049A0A140TA62 436 aa13.59□□□□□ -0.23
PTP4A1P2-201ENST00000546033 A0A1B0GWA3 101 aa13.59□□□□□ -0.23
PTP4A1P2-201ENST00000546033 TMEM229AB2RXF0 380 aa13.59□□□□□ -0.23
PTP4A1P2-201ENST00000546033 M0QX08 132 aa13.59□□□□□ -0.23
PTP4A1P2-201ENST00000546033 OR2T1O43869 369 aa13.59□□□□□ -0.23
PTP4A1P2-201ENST00000546033 CCDC22O60826 627 aa13.59□□□□□ -0.23
PTP4A1P2-201ENST00000546033 KRT34O76011 436 aa13.59□□□□□ -0.23
PTP4A1P2-201ENST00000546033 MFN2O95140 757 aa13.59□□□□□ -0.23
PTP4A1P2-201ENST00000546033 THBDP07204 575 aa13.59□□□□□ -0.23
PTP4A1P2-201ENST00000546033 C8BP07358 591 aa13.59□□□□□ -0.23
PTP4A1P2-201ENST00000546033 PCGF2P35227 344 aa13.59□□□□□ -0.23
PTP4A1P2-201ENST00000546033 PCBP3P57721 371 aaKnown RBP13.59□□□□□ -0.23
PTP4A1P2-201ENST00000546033 DMTNQ08495 405 aa13.59□□□□□ -0.23
PTP4A1P2-201ENST00000546033 VMACQ2NL98 169 aa13.59□□□□□ -0.23
PTP4A1P2-201ENST00000546033 GLIPR1L2Q4G1C9 344 aa13.59□□□□□ -0.23
PTP4A1P2-201ENST00000546033 FBXW9Q5XUX1 488 aa13.59□□□□□ -0.23
PTP4A1P2-201ENST00000546033 FAM91A1Q658Y4 838 aa13.59□□□□□ -0.23
PTP4A1P2-201ENST00000546033 REP15Q6BDI9 236 aa13.59□□□□□ -0.23
PTP4A1P2-201ENST00000546033 ALKBH2Q6NS38 261 aa13.59□□□□□ -0.23
PTP4A1P2-201ENST00000546033 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.59□□□□□ -0.23
PTP4A1P2-201ENST00000546033 GPAT4Q86UL3 456 aa13.59□□□□□ -0.23
PTP4A1P2-201ENST00000546033 TMEM99Q8N816 258 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms