RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 EDNRAP25101 427 aa12.62□□□□□ -0.39
VPS33A-208ENST00000543633 PBX2P40425 430 aa12.62□□□□□ -0.39
VPS33A-208ENST00000543633 DIO1P49895 249 aa12.62□□□□□ -0.39
VPS33A-208ENST00000543633 BLVRAP53004 296 aa12.62□□□□□ -0.39
VPS33A-208ENST00000543633 SCAND1P57086 179 aa12.62□□□□□ -0.39
VPS33A-208ENST00000543633 RAP2BP61225 183 aa12.62□□□□□ -0.39
VPS33A-208ENST00000543633 MFSD13AQ14CX5 517 aa12.62□□□□□ -0.39
VPS33A-208ENST00000543633 POU4F3Q15319 338 aa12.62□□□□□ -0.39
VPS33A-208ENST00000543633 LINC00114Q6XXX2 140 aa12.62□□□□□ -0.39
VPS33A-208ENST00000543633 SLC51BQ86UW2 128 aa12.62□□□□□ -0.39
VPS33A-208ENST00000543633 SNX33Q8WV41 574 aa12.62□□□□□ -0.39
VPS33A-208ENST00000543633 FAM131CQ96AQ9 280 aa12.62□□□□□ -0.39
VPS33A-208ENST00000543633 TNFRSF13CQ96RJ3 184 aa12.62□□□□□ -0.39
VPS33A-208ENST00000543633 APOOQ9BUR5 198 aa12.62□□□□□ -0.39
VPS33A-208ENST00000543633 METTL17Q9H7H0 456 aaPredicted RBP12.62□□□□□ -0.39
VPS33A-208ENST00000543633 IL21RQ9HBE5 538 aa12.62□□□□□ -0.39
VPS33A-208ENST00000543633 FLRT3Q9NZU0 649 aa12.62□□□□□ -0.39
VPS33A-208ENST00000543633 FBXL4Q9UKA2 621 aa12.62□□□□□ -0.39
VPS33A-208ENST00000543633 ETV7Q9Y603 341 aa12.62□□□□□ -0.39
VPS33A-208ENST00000543633 ATG2AQ2TAZ0 1938 aa12.62□□□□□ -0.39
VPS33A-208ENST00000543633 ANKRD20A5PA0PJZ0 165 aa12.62□□□□□ -0.39
VPS33A-208ENST00000543633 OR6C65A6NJZ3 312 aa12.62□□□□□ -0.39
VPS33A-208ENST00000543633 IFITM5A6NNB3 132 aa12.62□□□□□ -0.39
VPS33A-208ENST00000543633 GPR75O95800 540 aa12.62□□□□□ -0.39
VPS33A-208ENST00000543633 HPXP02790 462 aa12.62□□□□□ -0.39
VPS33A-208ENST00000543633 IFNGR1P15260 489 aa12.62□□□□□ -0.39
VPS33A-208ENST00000543633 DPP4P27487 766 aa12.62□□□□□ -0.39
VPS33A-208ENST00000543633 PRICKLE4Q2TBC4 344 aa12.62□□□□□ -0.39
VPS33A-208ENST00000543633 RNASE12Q5GAN4 147 aaKnown RBP12.62□□□□□ -0.39
VPS33A-208ENST00000543633 COL13A1Q5TAT6 717 aaPredicted RBP12.62□□□□□ -0.39
VPS33A-208ENST00000543633 FBXO42Q6P3S6 717 aa12.62□□□□□ -0.39
VPS33A-208ENST00000543633 KIAA1324Q6UXG2 1013 aaKnown RBP12.62□□□□□ -0.39
VPS33A-208ENST00000543633 VITQ6UXI7 678 aa12.62□□□□□ -0.39
VPS33A-208ENST00000543633 LINGO2Q7L985 606 aa12.62□□□□□ -0.39
VPS33A-208ENST00000543633 FTMTQ8N4E7 242 aa12.62□□□□□ -0.39
VPS33A-208ENST00000543633 OR6C4Q8NGE1 309 aa12.62□□□□□ -0.39
VPS33A-208ENST00000543633 OR2T4Q8NH00 348 aa12.62□□□□□ -0.39
VPS33A-208ENST00000543633 FLVCR1-AS1Q8TAF5 88 aa12.62□□□□□ -0.39
VPS33A-208ENST00000543633 SLC25A38Q96DW6 304 aa12.62□□□□□ -0.39
VPS33A-208ENST00000543633 RBM18Q96H35 190 aaKnown RBP12.62□□□□□ -0.39
VPS33A-208ENST00000543633 OR14A2Q96R54 314 aa12.62□□□□□ -0.39
VPS33A-208ENST00000543633 TRPV4Q9HBA0 871 aa12.62□□□□□ -0.39
VPS33A-208ENST00000543633 GPN1Q9HCN4 374 aaPredicted RBP12.62□□□□□ -0.39
VPS33A-208ENST00000543633 NCDNQ9UBB6 729 aa12.62□□□□□ -0.39
VPS33A-208ENST00000543633 SERGEFQ9UGK8 458 aa12.62□□□□□ -0.39
VPS33A-208ENST00000543633 PCOLCE2Q9UKZ9 415 aa12.62□□□□□ -0.39
VPS33A-208ENST00000543633 CLEC4AQ9UMR7 237 aa12.62□□□□□ -0.39
VPS33A-208ENST00000543633 RCE1Q9Y256 329 aa12.62□□□□□ -0.39
VPS33A-208ENST00000543633 A0A0B4J203 849 aa12.61□□□□□ -0.39
VPS33A-208ENST00000543633 A0A1W2PP55 124 aa12.61□□□□□ -0.39
VPS33A-208ENST00000543633 ARPC3O15145 178 aa12.61□□□□□ -0.39
VPS33A-208ENST00000543633 PPM1BO75688 479 aa12.61□□□□□ -0.39
VPS33A-208ENST00000543633 KAT7O95251 611 aa12.61□□□□□ -0.39
VPS33A-208ENST00000543633 SRMP19623 302 aa12.61□□□□□ -0.39
VPS33A-208ENST00000543633 KIAA1024LP59773 190 aa12.61□□□□□ -0.39
VPS33A-208ENST00000543633 PON3Q15166 354 aa12.61□□□□□ -0.39
VPS33A-208ENST00000543633 DEFB134Q4QY38 66 aa12.61□□□□□ -0.39
VPS33A-208ENST00000543633 MANEAQ5SRI9 462 aa12.61□□□□□ -0.39
VPS33A-208ENST00000543633 ZNF776Q68DI1 518 aaPredicted RBP12.61□□□□□ -0.39
VPS33A-208ENST00000543633 SLC6A19Q695T7 634 aa12.61□□□□□ -0.39
VPS33A-208ENST00000543633 FCRLBQ6BAA4 426 aa12.61□□□□□ -0.39
VPS33A-208ENST00000543633 GLDNQ6ZMI3 551 aaPredicted RBP12.61□□□□□ -0.39
VPS33A-208ENST00000543633 DPY19L2P2Q6ZN68 376 aa12.61□□□□□ -0.39
VPS33A-208ENST00000543633 ZNF550Q7Z398 422 aa12.61□□□□□ -0.39
VPS33A-208ENST00000543633 GLRX5Q86SX6 157 aa12.61□□□□□ -0.39
VPS33A-208ENST00000543633 GPAT4Q86UL3 456 aa12.61□□□□□ -0.39
VPS33A-208ENST00000543633 RFLNBQ8N5W9 214 aa12.61□□□□□ -0.39
VPS33A-208ENST00000543633 OR4E2Q8NGC2 313 aa12.61□□□□□ -0.39
VPS33A-208ENST00000543633 OR52E2Q8NGJ4 325 aa12.61□□□□□ -0.39
VPS33A-208ENST00000543633 ZCCHC10Q8TBK6 192 aa12.61□□□□□ -0.39
VPS33A-208ENST00000543633 FCAMRQ8WWV6 532 aa12.61□□□□□ -0.39
VPS33A-208ENST00000543633 CTHRC1Q96CG8 243 aa12.61□□□□□ -0.39
VPS33A-208ENST00000543633 ZMYND19Q96E35 227 aaPredicted RBP12.61□□□□□ -0.39
VPS33A-208ENST00000543633 MS4A3Q96HJ5 214 aa12.61□□□□□ -0.39
VPS33A-208ENST00000543633 DNAJB12Q9NXW2 375 aaKnown RBP12.61□□□□□ -0.39
VPS33A-208ENST00000543633 TAS2R5Q9NYW4 299 aa12.61□□□□□ -0.39
VPS33A-208ENST00000543633 ZNF281Q9Y2X9 895 aa12.61□□□□□ -0.39
VPS33A-208ENST00000543633 AK6Q9Y3D8 172 aaKnown RBP12.61□□□□□ -0.39
VPS33A-208ENST00000543633 NPIPA5A0A0B4J1W7 369 aa12.61□□□□□ -0.39
VPS33A-208ENST00000543633 A0A1W2PPL8 197 aa12.61□□□□□ -0.39
VPS33A-208ENST00000543633 PRSS38A1L453 326 aa12.61□□□□□ -0.39
VPS33A-208ENST00000543633 LRRC72A6NJI9 287 aa12.61□□□□□ -0.39
VPS33A-208ENST00000543633 NPIPA7E9PJI5 369 aa12.61□□□□□ -0.39
VPS33A-208ENST00000543633 P2RX6O15547 441 aa12.61□□□□□ -0.39
VPS33A-208ENST00000543633 GYPBP06028 91 aa12.61□□□□□ -0.39
VPS33A-208ENST00000543633 NPIPA8P0DM63 369 aa12.61□□□□□ -0.39
VPS33A-208ENST00000543633 SELENOPP49908 381 aa12.61□□□□□ -0.39
VPS33A-208ENST00000543633 GPR143P51810 404 aa12.61□□□□□ -0.39
VPS33A-208ENST00000543633 VSX2P58304 361 aaPredicted RBP12.61□□□□□ -0.39
VPS33A-208ENST00000543633 TSPAN5P62079 268 aa12.61□□□□□ -0.39
VPS33A-208ENST00000543633 MGAT2Q10469 447 aa12.61□□□□□ -0.39
VPS33A-208ENST00000543633 OPCMLQ14982 345 aa12.61□□□□□ -0.39
VPS33A-208ENST00000543633 ALG10BQ5I7T1 473 aa12.61□□□□□ -0.39
VPS33A-208ENST00000543633 TMEM65Q6PI78 240 aa12.61□□□□□ -0.39
VPS33A-208ENST00000543633 OR4N5Q8IXE1 308 aa12.61□□□□□ -0.39
VPS33A-208ENST00000543633 SLC35F3Q8IY50 421 aa12.61□□□□□ -0.39
VPS33A-208ENST00000543633 BMPERQ8N8U9 685 aa12.61□□□□□ -0.39
VPS33A-208ENST00000543633 BEST4Q8NFU0 473 aa12.61□□□□□ -0.39
VPS33A-208ENST00000543633 GRHL3Q8TE85 626 aa12.61□□□□□ -0.39
VPS33A-208ENST00000543633 CNOT9Q92600 299 aaKnown RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms