RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 SLC7A6OSQ96CW6 309 aaPredicted RBP16.81■□□□□ 0.28
VPS33A-205ENST00000541169 HSH2DQ96JZ2 352 aa16.81■□□□□ 0.28
VPS33A-205ENST00000541169 HS6ST2Q96MM7 605 aa16.81■□□□□ 0.28
VPS33A-205ENST00000541169 THTPAQ9BU02 230 aa16.81■□□□□ 0.28
VPS33A-205ENST00000541169 TRIM15Q9C019 465 aa16.81■□□□□ 0.28
VPS33A-205ENST00000541169 EMC9Q9Y3B6 208 aa16.81■□□□□ 0.28
VPS33A-205ENST00000541169 FAM32AQ9Y421 112 aaKnown RBP16.81■□□□□ 0.28
VPS33A-205ENST00000541169 DIDO1Q9BTC0 2240 aaKnown RBP16.81■□□□□ 0.28
VPS33A-205ENST00000541169 FLNCQ14315 2725 aa16.81■□□□□ 0.28
VPS33A-205ENST00000541169 TRAV36DV7A0A075B6V5 113 aa16.8■□□□□ 0.28
VPS33A-205ENST00000541169 CPSF4LA6NMK7 179 aaKnown RBP16.8■□□□□ 0.28
VPS33A-205ENST00000541169 IGF2P01344 180 aa16.8■□□□□ 0.28
VPS33A-205ENST00000541169 PEX19P40855 299 aa16.8■□□□□ 0.28
VPS33A-205ENST00000541169 FAM69AQ5T7M9 428 aa16.8■□□□□ 0.28
VPS33A-205ENST00000541169 TTC33Q6PID6 262 aaPredicted RBP16.8■□□□□ 0.28
VPS33A-205ENST00000541169 PAQR6Q6TCH4 344 aa16.8■□□□□ 0.28
VPS33A-205ENST00000541169 LINC00114Q6XXX2 140 aa16.8■□□□□ 0.28
VPS33A-205ENST00000541169 DEF8Q6ZN54 512 aa16.8■□□□□ 0.28
VPS33A-205ENST00000541169 RNF217Q8TC41 542 aa16.8■□□□□ 0.28
VPS33A-205ENST00000541169 PYURFQ96I23 114 aa16.8■□□□□ 0.28
VPS33A-205ENST00000541169 ARL5BQ96KC2 179 aa16.8■□□□□ 0.28
VPS33A-205ENST00000541169 PRRC1Q96M27 445 aa16.8■□□□□ 0.28
VPS33A-205ENST00000541169 KLHL4Q9C0H6 718 aa16.8■□□□□ 0.28
VPS33A-205ENST00000541169 OR11A1Q9GZK7 315 aa16.8■□□□□ 0.28
VPS33A-205ENST00000541169 KCNJ16Q9NPI9 418 aa16.8■□□□□ 0.28
VPS33A-205ENST00000541169 EMC3Q9P0I2 261 aa16.8■□□□□ 0.28
VPS33A-205ENST00000541169 GMPR2Q9P2T1 348 aaKnown RBP16.8■□□□□ 0.28
VPS33A-205ENST00000541169 FOXD3Q9UJU5 478 aaPredicted RBP16.8■□□□□ 0.28
VPS33A-205ENST00000541169 A0A1W2PNR3 127 aa16.79■□□□□ 0.28
VPS33A-205ENST00000541169 LIPT2A6NK58 231 aa16.79■□□□□ 0.28
VPS33A-205ENST00000541169 GPR171O14626 319 aa16.79■□□□□ 0.28
VPS33A-205ENST00000541169 CYTIPO60759 359 aa16.79■□□□□ 0.28
VPS33A-205ENST00000541169 SS18L1O75177 396 aaPredicted RBP16.79■□□□□ 0.28
VPS33A-205ENST00000541169 VAMP5O95183 116 aa16.79■□□□□ 0.28
VPS33A-205ENST00000541169 MT-ATP6P00846 226 aa16.79■□□□□ 0.28
VPS33A-205ENST00000541169 GTF2E2P29084 291 aaKnown RBP16.79■□□□□ 0.28
VPS33A-205ENST00000541169 OR1E2P47887 323 aa16.79■□□□□ 0.28
VPS33A-205ENST00000541169 CTBP2P56545 445 aa16.79■□□□□ 0.28
VPS33A-205ENST00000541169 OR2B6P58173 313 aa16.79■□□□□ 0.28
VPS33A-205ENST00000541169 H3F3AP84243 136 aa16.79■□□□□ 0.28
VPS33A-205ENST00000541169 LCN8Q6JVE9 175 aa16.79■□□□□ 0.28
VPS33A-205ENST00000541169 PPP4R4Q6NUP7 873 aa16.79■□□□□ 0.28
VPS33A-205ENST00000541169 FAM214BQ7L5A3 538 aa16.79■□□□□ 0.28
VPS33A-205ENST00000541169 VTCN1Q7Z7D3 282 aa16.79■□□□□ 0.28
VPS33A-205ENST00000541169 OR4D11Q8NGI4 311 aa16.79■□□□□ 0.28
VPS33A-205ENST00000541169 INTS12Q96CB8 462 aaKnown RBP16.79■□□□□ 0.28
VPS33A-205ENST00000541169 SLC41A3Q96GZ6 507 aa16.79■□□□□ 0.28
VPS33A-205ENST00000541169 LRGUKQ96M69 825 aa16.79■□□□□ 0.28
VPS33A-205ENST00000541169 WFDC6Q9BQY6 131 aa16.79■□□□□ 0.28
VPS33A-205ENST00000541169 ZNF426Q9BUY5 554 aa16.79■□□□□ 0.28
VPS33A-205ENST00000541169 SRXN1Q9BYN0 137 aa16.79■□□□□ 0.28
VPS33A-205ENST00000541169 ANKRD19PQ9H560 264 aa16.79■□□□□ 0.28
VPS33A-205ENST00000541169 CHST11Q9NPF2 352 aa16.79■□□□□ 0.28
VPS33A-205ENST00000541169 FANCFQ9NPI8 374 aa16.79■□□□□ 0.28
VPS33A-205ENST00000541169 RIMS3Q9UJD0 308 aa16.79■□□□□ 0.28
VPS33A-205ENST00000541169 SLC7A7Q9UM01 511 aa16.79■□□□□ 0.28
VPS33A-205ENST00000541169 CORINQ9Y5Q5 1042 aa16.79■□□□□ 0.28
VPS33A-205ENST00000541169 DOCK7Q96N67 2140 aa16.79■□□□□ 0.28
VPS33A-205ENST00000541169 A0A1W2PNV4 684 aa16.78■□□□□ 0.28
VPS33A-205ENST00000541169 ZNF724A8MTY0 619 aa16.78■□□□□ 0.28
VPS33A-205ENST00000541169 FZD7O75084 574 aa16.78■□□□□ 0.28
VPS33A-205ENST00000541169 AQP8O94778 261 aa16.78■□□□□ 0.28
VPS33A-205ENST00000541169 PCYT1AP49585 367 aa16.78■□□□□ 0.28
VPS33A-205ENST00000541169 SMIM11AP58511 58 aa16.78■□□□□ 0.28
VPS33A-205ENST00000541169 CBX1P83916 185 aa16.78■□□□□ 0.28
VPS33A-205ENST00000541169 CCDC121Q6ZUS5 278 aa16.78■□□□□ 0.28
VPS33A-205ENST00000541169 RBM45Q8IUH3 476 aaKnown RBP16.78■□□□□ 0.28
VPS33A-205ENST00000541169 CCDC71Q8IV32 467 aaPredicted RBP16.78■□□□□ 0.28
VPS33A-205ENST00000541169 OFCC1Q8IZS5 231 aa16.78■□□□□ 0.28
VPS33A-205ENST00000541169 OR6K3Q8NGY3 331 aa16.78■□□□□ 0.28
VPS33A-205ENST00000541169 FNDC11Q9BVV2 318 aa16.78■□□□□ 0.28
VPS33A-205ENST00000541169 SF3B5Q9BWJ5 86 aaKnown RBP16.78■□□□□ 0.28
VPS33A-205ENST00000541169 AMBRA1Q9C0C7 1298 aa16.78■□□□□ 0.28
VPS33A-205ENST00000541169 BCO1Q9HAY6 547 aa16.78■□□□□ 0.28
VPS33A-205ENST00000541169 KLHL13Q9P2N7 655 aa16.78■□□□□ 0.28
VPS33A-205ENST00000541169 PACSIN3Q9UKS6 424 aa16.78■□□□□ 0.28
VPS33A-205ENST00000541169 ENPP4Q9Y6X5 453 aa16.78■□□□□ 0.28
VPS33A-205ENST00000541169 TENM4Q6N022 2769 aa16.77■□□□□ 0.28
VPS33A-205ENST00000541169 ZC3H12DA2A288 527 aaKnown RBP16.77■□□□□ 0.28
VPS33A-205ENST00000541169 SMAD9O15198 467 aaKnown RBP16.77■□□□□ 0.28
VPS33A-205ENST00000541169 YES1P07947 543 aa16.77■□□□□ 0.28
VPS33A-205ENST00000541169 RHCEP18577 417 aa16.77■□□□□ 0.28
VPS33A-205ENST00000541169 FPR1P21462 350 aa16.77■□□□□ 0.28
VPS33A-205ENST00000541169 BMP5P22003 454 aa16.77■□□□□ 0.28
VPS33A-205ENST00000541169 SLC16A1P53985 500 aa16.77■□□□□ 0.28
VPS33A-205ENST00000541169 EGR4Q05215 589 aa16.77■□□□□ 0.28
VPS33A-205ENST00000541169 RASGEF1BQ0VAM2 473 aa16.77■□□□□ 0.28
VPS33A-205ENST00000541169 GUSBP1Q15486 140 aa16.77■□□□□ 0.28
VPS33A-205ENST00000541169 FBXL19-AS1Q494R0 122 aa16.77■□□□□ 0.28
VPS33A-205ENST00000541169 TMEM201Q5SNT2 666 aa16.77■□□□□ 0.28
VPS33A-205ENST00000541169 PGM2L1Q6PCE3 622 aa16.77■□□□□ 0.28
VPS33A-205ENST00000541169 GDF7Q7Z4P5 450 aa16.77■□□□□ 0.28
VPS33A-205ENST00000541169 SCAIQ8N9R8 606 aa16.77■□□□□ 0.28
VPS33A-205ENST00000541169 NAXEQ8NCW5 288 aa16.77■□□□□ 0.28
VPS33A-205ENST00000541169 ZNF347Q96SE7 839 aa16.77■□□□□ 0.28
VPS33A-205ENST00000541169 PRR14Q9BWN1 585 aa16.77■□□□□ 0.28
VPS33A-205ENST00000541169 MAGIXQ9H6Y5 334 aa16.77■□□□□ 0.28
VPS33A-205ENST00000541169 SLC24A3Q9HC58 644 aa16.77■□□□□ 0.28
VPS33A-205ENST00000541169 B3GALT5Q9Y2C3 310 aa16.77■□□□□ 0.28
VPS33A-205ENST00000541169 DOPEY1Q5JWR5 2465 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms