RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 RASSF1Q9NS23 344 aa15□□□□□ -0.01
CD9-209ENST00000540891 GID8Q9NWU2 228 aa15□□□□□ -0.01
CD9-209ENST00000540891 KLHL28Q9NXS3 571 aa15□□□□□ -0.01
CD9-209ENST00000540891 TESQ9UGI8 421 aaKnown RBP15□□□□□ -0.01
CD9-209ENST00000540891 TEX15Q9BXT5 2789 aa15□□□□□ -0.01
CD9-209ENST00000540891 CCT8L1PA6NM43 557 aa14.99□□□□□ -0.01
CD9-209ENST00000540891 C16orf97H3BN30 126 aa14.99□□□□□ -0.01
CD9-209ENST00000540891 AIM2O14862 343 aa14.99□□□□□ -0.01
CD9-209ENST00000540891 NTF4P34130 210 aa14.99□□□□□ -0.01
CD9-209ENST00000540891 SLC16A1P53985 500 aa14.99□□□□□ -0.01
CD9-209ENST00000540891 SLC35A1P78382 337 aa14.99□□□□□ -0.01
CD9-209ENST00000540891 CEACAM7Q14002 265 aa14.99□□□□□ -0.01
CD9-209ENST00000540891 NPTX1Q15818 432 aa14.99□□□□□ -0.01
CD9-209ENST00000540891 NRF1Q16656 503 aa14.99□□□□□ -0.01
CD9-209ENST00000540891 C8orf82Q6P1X6 216 aaPredicted RBP14.99□□□□□ -0.01
CD9-209ENST00000540891 BEND4Q6ZU67 534 aa14.99□□□□□ -0.01
CD9-209ENST00000540891 CPLX4Q7Z7G2 160 aa14.99□□□□□ -0.01
CD9-209ENST00000540891 PATL1Q86TB9 770 aaKnown RBP14.99□□□□□ -0.01
CD9-209ENST00000540891 TMEM200AQ86VY9 491 aa14.99□□□□□ -0.01
CD9-209ENST00000540891 GABRG1Q8N1C3 465 aa14.99□□□□□ -0.01
CD9-209ENST00000540891 OR4D11Q8NGI4 311 aa14.99□□□□□ -0.01
CD9-209ENST00000540891 PIGXQ8TBF5 258 aa14.99□□□□□ -0.01
CD9-209ENST00000540891 PTDSS2Q9BVG9 487 aa14.99□□□□□ -0.01
CD9-209ENST00000540891 NSRP1Q9H0G5 558 aaKnown RBP14.99□□□□□ -0.01
CD9-209ENST00000540891 C12orf10Q9HB07 376 aa14.99□□□□□ -0.01
CD9-209ENST00000540891 CMTM6Q9NX76 183 aa14.99□□□□□ -0.01
CD9-209ENST00000540891 GMPR2Q9P2T1 348 aaKnown RBP14.99□□□□□ -0.01
CD9-209ENST00000540891 PRSS50Q9UI38 385 aa14.99□□□□□ -0.01
CD9-209ENST00000540891 PDZD2O15018 2839 aa14.99□□□□□ -0.01
CD9-209ENST00000540891 IGKV1D-42A0A075B6H8 117 aa14.98□□□□□ -0.01
CD9-209ENST00000540891 FAM220BPB1ANY3 271 aa14.98□□□□□ -0.01
CD9-209ENST00000540891 C8BP07358 591 aa14.98□□□□□ -0.01
CD9-209ENST00000540891 OR3A2P47893 321 aa14.98□□□□□ -0.01
CD9-209ENST00000540891 P2RY4P51582 365 aa14.98□□□□□ -0.01
CD9-209ENST00000540891 VEZF1Q14119 521 aa14.98□□□□□ -0.01
CD9-209ENST00000540891 OR1Q1Q15612 314 aa14.98□□□□□ -0.01
CD9-209ENST00000540891 OR7A5Q15622 319 aa14.98□□□□□ -0.01
CD9-209ENST00000540891 INTS11Q5TA45 600 aaKnown RBP14.98□□□□□ -0.01
CD9-209ENST00000540891 C1orf140Q5VVS0 124 aa14.98□□□□□ -0.01
CD9-209ENST00000540891 ANKRD34AQ69YU3 496 aa14.98□□□□□ -0.01
CD9-209ENST00000540891 PAQR6Q6TCH4 344 aa14.98□□□□□ -0.01
CD9-209ENST00000540891 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.98□□□□□ -0.01
CD9-209ENST00000540891 STK32CQ86UX6 486 aa14.98□□□□□ -0.01
CD9-209ENST00000540891 RBM45Q8IUH3 476 aaKnown RBP14.98□□□□□ -0.01
CD9-209ENST00000540891 SLC15A3Q8IY34 581 aa14.98□□□□□ -0.01
CD9-209ENST00000540891 TMEM99Q8N816 258 aa14.98□□□□□ -0.01
CD9-209ENST00000540891 OR6T1Q8NGN1 323 aa14.98□□□□□ -0.01
CD9-209ENST00000540891 STK35Q8TDR2 534 aa14.98□□□□□ -0.01
CD9-209ENST00000540891 TRIM2Q9C040 744 aa14.98□□□□□ -0.01
CD9-209ENST00000540891 KLHL4Q9C0H6 718 aa14.98□□□□□ -0.01
CD9-209ENST00000540891 EVA1AQ9H8M9 152 aa14.98□□□□□ -0.01
CD9-209ENST00000540891 NDRG3Q9UGV2 375 aa14.98□□□□□ -0.01
CD9-209ENST00000540891 SLC13A4Q9UKG4 626 aa14.98□□□□□ -0.01
CD9-209ENST00000540891 MPDZO75970 2070 aa14.97□□□□□ -0.01
CD9-209ENST00000540891 A0A0B4J2E0 115 aa14.97□□□□□ -0.01
CD9-209ENST00000540891 A0A1B0GX12 115 aa14.97□□□□□ -0.01
CD9-209ENST00000540891 ELOA3DA6NLF2 546 aaPredicted RBP14.97□□□□□ -0.01
CD9-209ENST00000540891 FTCDNL1E5RQL4 147 aa14.97□□□□□ -0.01
CD9-209ENST00000540891 SIAH2O43255 324 aa14.97□□□□□ -0.01
CD9-209ENST00000540891 EIF1BO60739 113 aaKnown RBP14.97□□□□□ -0.01
CD9-209ENST00000540891 AKR7A3O95154 331 aa14.97□□□□□ -0.01
CD9-209ENST00000540891 GPIP06744 558 aa14.97□□□□□ -0.01
CD9-209ENST00000540891 ELOA3BQ3SY89 546 aa14.97□□□□□ -0.01
CD9-209ENST00000540891 ALG10BQ5I7T1 473 aa14.97□□□□□ -0.01
CD9-209ENST00000540891 FAM91A1Q658Y4 838 aa14.97□□□□□ -0.01
CD9-209ENST00000540891 ERICH5Q6P6B1 374 aa14.97□□□□□ -0.01
CD9-209ENST00000540891 PIGWQ7Z7B1 504 aa14.97□□□□□ -0.01
CD9-209ENST00000540891 GALNT5Q7Z7M9 940 aa14.97□□□□□ -0.01
CD9-209ENST00000540891 TSPYL5Q86VY4 417 aaPredicted RBP14.97□□□□□ -0.01
CD9-209ENST00000540891 ELOA3Q8NG57 546 aa14.97□□□□□ -0.01
CD9-209ENST00000540891 DNAJA4Q8WW22 397 aaPredicted RBP14.97□□□□□ -0.01
CD9-209ENST00000540891 NRGNQ92686 78 aa14.97□□□□□ -0.01
CD9-209ENST00000540891 KTI12Q96EK9 354 aaPredicted RBP14.97□□□□□ -0.01
CD9-209ENST00000540891 CLEC4MQ9H2X3 399 aaPredicted RBP14.97□□□□□ -0.01
CD9-209ENST00000540891 RPS6KB2Q9UBS0 482 aa14.97□□□□□ -0.01
CD9-209ENST00000540891 LRBAP50851 2863 aa14.96□□□□□ -0.01
CD9-209ENST00000540891 A0A1W2PPR1 153 aa14.96□□□□□ -0.01
CD9-209ENST00000540891 AQP7P3A6NL99 342 aa14.96□□□□□ -0.01
CD9-209ENST00000540891 FMO6PO60774 539 aa14.96□□□□□ -0.01
CD9-209ENST00000540891 FZD7O75084 574 aa14.96□□□□□ -0.01
CD9-209ENST00000540891 HRGP04196 525 aa14.96□□□□□ -0.01
CD9-209ENST00000540891 THBDP07204 575 aa14.96□□□□□ -0.01
CD9-209ENST00000540891 PSMB1P20618 241 aaKnown RBP14.96□□□□□ -0.01
CD9-209ENST00000540891 NCALDP61601 193 aa14.96□□□□□ -0.01
CD9-209ENST00000540891 SLC17A1Q14916 467 aa14.96□□□□□ -0.01
CD9-209ENST00000540891 TSC22D1Q15714 1073 aa14.96□□□□□ -0.01
CD9-209ENST00000540891 FREM1Q5H8C1 2179 aa14.96□□□□□ -0.01
CD9-209ENST00000540891 OTUD3Q5T2D3 398 aaPredicted RBP14.96□□□□□ -0.01
CD9-209ENST00000540891 ULK3Q6PHR2 472 aa14.96□□□□□ -0.01
CD9-209ENST00000540891 HACD2Q6Y1H2 254 aa14.96□□□□□ -0.01
CD9-209ENST00000540891 RANBP3LQ86VV4 465 aaPredicted RBP14.96□□□□□ -0.01
CD9-209ENST00000540891 CXorf67Q86X51 503 aaPredicted RBP14.96□□□□□ -0.01
CD9-209ENST00000540891 P3H2Q8IVL5 708 aa14.96□□□□□ -0.01
CD9-209ENST00000540891 OR2T12Q8NG77 320 aa14.96□□□□□ -0.01
CD9-209ENST00000540891 SLC38A4Q969I6 547 aa14.96□□□□□ -0.01
CD9-209ENST00000540891 MCHR1Q99705 422 aa14.96□□□□□ -0.01
CD9-209ENST00000540891 NAA11Q9BSU3 229 aaPredicted RBP14.96□□□□□ -0.01
CD9-209ENST00000540891 MED18Q9BUE0 208 aa14.96□□□□□ -0.01
CD9-209ENST00000540891 POLDIP3Q9BY77 421 aaKnown RBP14.96□□□□□ -0.01
CD9-209ENST00000540891 EFCAB1Q9HAE3 211 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms