RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 NRF1Q16656 503 aa16.25■□□□□ 0.19
SNRPA1-203ENST00000540017 C8orf82Q6P1X6 216 aaPredicted RBP16.25■□□□□ 0.19
SNRPA1-203ENST00000540017 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.25■□□□□ 0.19
SNRPA1-203ENST00000540017 PIGWQ7Z7B1 504 aa16.25■□□□□ 0.19
SNRPA1-203ENST00000540017 PATL1Q86TB9 770 aaKnown RBP16.25■□□□□ 0.19
SNRPA1-203ENST00000540017 RBM45Q8IUH3 476 aaKnown RBP16.25■□□□□ 0.19
SNRPA1-203ENST00000540017 SLC15A3Q8IY34 581 aa16.25■□□□□ 0.19
SNRPA1-203ENST00000540017 BHLHE22Q8NFJ8 381 aaPredicted RBP16.25■□□□□ 0.19
SNRPA1-203ENST00000540017 OR52E4Q8NGH9 312 aa16.25■□□□□ 0.19
SNRPA1-203ENST00000540017 WFIKKN1Q96NZ8 548 aa16.25■□□□□ 0.19
SNRPA1-203ENST00000540017 TRIM2Q9C040 744 aa16.25■□□□□ 0.19
SNRPA1-203ENST00000540017 KLHL4Q9C0H6 718 aa16.25■□□□□ 0.19
SNRPA1-203ENST00000540017 TESMINQ9Y4I5 508 aa16.25■□□□□ 0.19
SNRPA1-203ENST00000540017 FREM1Q5H8C1 2179 aa16.24■□□□□ 0.19
SNRPA1-203ENST00000540017 IGKV3D-15A0A087WSY6 115 aa16.24■□□□□ 0.19
SNRPA1-203ENST00000540017 A6NNC1 897 aa16.24■□□□□ 0.19
SNRPA1-203ENST00000540017 ZNF724A8MTY0 619 aa16.24■□□□□ 0.19
SNRPA1-203ENST00000540017 C16orf97H3BN30 126 aa16.24■□□□□ 0.19
SNRPA1-203ENST00000540017 IDUAP35475 653 aa16.24■□□□□ 0.19
SNRPA1-203ENST00000540017 SLC35A1P78382 337 aa16.24■□□□□ 0.19
SNRPA1-203ENST00000540017 DAZAP2Q15038 168 aaPredicted RBP16.24■□□□□ 0.19
SNRPA1-203ENST00000540017 PDK3Q15120 406 aa16.24■□□□□ 0.19
SNRPA1-203ENST00000540017 OR1Q1Q15612 314 aa16.24■□□□□ 0.19
SNRPA1-203ENST00000540017 OR7A5Q15622 319 aa16.24■□□□□ 0.19
SNRPA1-203ENST00000540017 INTS11Q5TA45 600 aaKnown RBP16.24■□□□□ 0.19
SNRPA1-203ENST00000540017 C1orf140Q5VVS0 124 aa16.24■□□□□ 0.19
SNRPA1-203ENST00000540017 ANKRD34AQ69YU3 496 aa16.24■□□□□ 0.19
SNRPA1-203ENST00000540017 C6orf89Q6UWU4 347 aa16.24■□□□□ 0.19
SNRPA1-203ENST00000540017 STAC2Q6ZMT1 411 aa16.24■□□□□ 0.19
SNRPA1-203ENST00000540017 OR6T1Q8NGN1 323 aa16.24■□□□□ 0.19
SNRPA1-203ENST00000540017 ZHX1-C8orf76Q96EF9 292 aa16.24■□□□□ 0.19
SNRPA1-203ENST00000540017 DACH2Q96NX9 599 aa16.24■□□□□ 0.19
SNRPA1-203ENST00000540017 KLHL28Q9NXS3 571 aa16.24■□□□□ 0.19
SNRPA1-203ENST00000540017 RPS6KB2Q9UBS0 482 aa16.24■□□□□ 0.19
SNRPA1-203ENST00000540017 TESQ9UGI8 421 aaKnown RBP16.24■□□□□ 0.19
SNRPA1-203ENST00000540017 CSMD1Q96PZ7 3565 aa16.24■□□□□ 0.19
SNRPA1-203ENST00000540017 IGKV1D-42A0A075B6H8 117 aa16.23■□□□□ 0.19
SNRPA1-203ENST00000540017 ELOA3DA6NLF2 546 aaPredicted RBP16.23■□□□□ 0.19
SNRPA1-203ENST00000540017 FAM220BPB1ANY3 271 aa16.23■□□□□ 0.19
SNRPA1-203ENST00000540017 AKR7A3O95154 331 aa16.23■□□□□ 0.19
SNRPA1-203ENST00000540017 GPIP06744 558 aa16.23■□□□□ 0.19
SNRPA1-203ENST00000540017 C8BP07358 591 aa16.23■□□□□ 0.19
SNRPA1-203ENST00000540017 VEZF1Q14119 521 aa16.23■□□□□ 0.19
SNRPA1-203ENST00000540017 ELOA3BQ3SY89 546 aa16.23■□□□□ 0.19
SNRPA1-203ENST00000540017 BEND4Q6ZU67 534 aa16.23■□□□□ 0.19
SNRPA1-203ENST00000540017 TSPYL5Q86VY4 417 aaPredicted RBP16.23■□□□□ 0.19
SNRPA1-203ENST00000540017 TMEM200AQ86VY9 491 aa16.23■□□□□ 0.19
SNRPA1-203ENST00000540017 P3H2Q8IVL5 708 aa16.23■□□□□ 0.19
SNRPA1-203ENST00000540017 GABRG1Q8N1C3 465 aa16.23■□□□□ 0.19
SNRPA1-203ENST00000540017 TMEM99Q8N816 258 aa16.23■□□□□ 0.19
SNRPA1-203ENST00000540017 ELOA3Q8NG57 546 aa16.23■□□□□ 0.19
SNRPA1-203ENST00000540017 VANGL1Q8TAA9 524 aaPredicted RBP16.23■□□□□ 0.19
SNRPA1-203ENST00000540017 PIGXQ8TBF5 258 aa16.23■□□□□ 0.19
SNRPA1-203ENST00000540017 STK35Q8TDR2 534 aa16.23■□□□□ 0.19
SNRPA1-203ENST00000540017 KTI12Q96EK9 354 aaPredicted RBP16.23■□□□□ 0.19
SNRPA1-203ENST00000540017 TACO1Q9BSH4 297 aaKnown RBP16.23■□□□□ 0.19
SNRPA1-203ENST00000540017 PTDSS2Q9BVG9 487 aa16.23■□□□□ 0.19
SNRPA1-203ENST00000540017 EFCAB1Q9HAE3 211 aa16.23■□□□□ 0.19
SNRPA1-203ENST00000540017 FAM53CQ9NYF3 392 aa16.23■□□□□ 0.19
SNRPA1-203ENST00000540017 PRSS50Q9UI38 385 aa16.23■□□□□ 0.19
SNRPA1-203ENST00000540017 SLC13A4Q9UKG4 626 aa16.23■□□□□ 0.19
SNRPA1-203ENST00000540017 HRNRQ86YZ3 2850 aaPredicted RBP16.23■□□□□ 0.19
SNRPA1-203ENST00000540017 A0A0B4J2E0 115 aa16.22■□□□□ 0.19
SNRPA1-203ENST00000540017 A0A1B0GX12 115 aa16.22■□□□□ 0.19
SNRPA1-203ENST00000540017 FTCDNL1E5RQL4 147 aa16.22■□□□□ 0.19
SNRPA1-203ENST00000540017 NME4O00746 187 aa16.22■□□□□ 0.19
SNRPA1-203ENST00000540017 EIF1BO60739 113 aaKnown RBP16.22■□□□□ 0.19
SNRPA1-203ENST00000540017 OR3A2P47893 321 aa16.22■□□□□ 0.19
SNRPA1-203ENST00000540017 P2RY4P51582 365 aa16.22■□□□□ 0.19
SNRPA1-203ENST00000540017 SLC16A1P53985 500 aa16.22■□□□□ 0.19
SNRPA1-203ENST00000540017 NCALDP61601 193 aa16.22■□□□□ 0.19
SNRPA1-203ENST00000540017 ALG10BQ5I7T1 473 aa16.22■□□□□ 0.19
SNRPA1-203ENST00000540017 OTUD3Q5T2D3 398 aaPredicted RBP16.22■□□□□ 0.19
SNRPA1-203ENST00000540017 ERICH5Q6P6B1 374 aa16.22■□□□□ 0.19
SNRPA1-203ENST00000540017 ULK3Q6PHR2 472 aa16.22■□□□□ 0.19
SNRPA1-203ENST00000540017 PAQR6Q6TCH4 344 aa16.22■□□□□ 0.19
SNRPA1-203ENST00000540017 GALNT5Q7Z7M9 940 aa16.22■□□□□ 0.19
SNRPA1-203ENST00000540017 STK32CQ86UX6 486 aa16.22■□□□□ 0.19
SNRPA1-203ENST00000540017 CXorf67Q86X51 503 aaPredicted RBP16.22■□□□□ 0.19
SNRPA1-203ENST00000540017 MICU2Q8IYU8 434 aa16.22■□□□□ 0.19
SNRPA1-203ENST00000540017 OR2T12Q8NG77 320 aa16.22■□□□□ 0.19
SNRPA1-203ENST00000540017 SLC26A7Q8TE54 656 aa16.22■□□□□ 0.19
SNRPA1-203ENST00000540017 DNAJA4Q8WW22 397 aaPredicted RBP16.22■□□□□ 0.19
SNRPA1-203ENST00000540017 NRGNQ92686 78 aa16.22■□□□□ 0.19
SNRPA1-203ENST00000540017 SLC38A4Q969I6 547 aa16.22■□□□□ 0.19
SNRPA1-203ENST00000540017 MCHR1Q99705 422 aa16.22■□□□□ 0.19
SNRPA1-203ENST00000540017 C12orf10Q9HB07 376 aa16.22■□□□□ 0.19
SNRPA1-203ENST00000540017 RASSF1Q9NS23 344 aa16.22■□□□□ 0.19
SNRPA1-203ENST00000540017 ADPRHL2Q9NX46 363 aa16.22■□□□□ 0.19
SNRPA1-203ENST00000540017 NDRG3Q9UGV2 375 aa16.22■□□□□ 0.19
SNRPA1-203ENST00000540017 SIAH2O43255 324 aa16.21■□□□□ 0.19
SNRPA1-203ENST00000540017 LYPD3O95274 346 aa16.21■□□□□ 0.19
SNRPA1-203ENST00000540017 THY1P04216 161 aa16.21■□□□□ 0.19
SNRPA1-203ENST00000540017 TNFRSF1BP20333 461 aa16.21■□□□□ 0.19
SNRPA1-203ENST00000540017 PTNP21246 168 aa16.21■□□□□ 0.19
SNRPA1-203ENST00000540017 RPS5P46782 204 aaKnown RBP16.21■□□□□ 0.19
SNRPA1-203ENST00000540017 NUDT2P50583 147 aa16.21■□□□□ 0.19
SNRPA1-203ENST00000540017 SLC7A2P52569 658 aa16.21■□□□□ 0.19
SNRPA1-203ENST00000540017 CDH12P55289 794 aa16.21■□□□□ 0.19
SNRPA1-203ENST00000540017 LIPEQ05469 1076 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms