RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 GAP43P17677 238 aa2.26□□□□□ -2.05
CCDC7-209ENST00000539197 HOXA9P31269 272 aa2.26□□□□□ -2.05
CCDC7-209ENST00000539197 DAP3P51398 398 aaKnown RBP2.26□□□□□ -2.05
CCDC7-209ENST00000539197 NSUN5P1Q3KNT7 163 aa2.26□□□□□ -2.05
CCDC7-209ENST00000539197 CAMK2N1Q7Z7J9 78 aa2.26□□□□□ -2.05
CCDC7-209ENST00000539197 KIAA1328Q86T90 577 aa2.26□□□□□ -2.05
CCDC7-209ENST00000539197 ACOT1Q86TX2 421 aa2.26□□□□□ -2.05
CCDC7-209ENST00000539197 C6orf223Q8N319 242 aa2.26□□□□□ -2.05
CCDC7-209ENST00000539197 STXBP6Q8NFX7 210 aa2.26□□□□□ -2.05
CCDC7-209ENST00000539197 NDRG1Q92597 394 aaKnown RBP2.26□□□□□ -2.05
CCDC7-209ENST00000539197 CEP170P1Q96L14 293 aa2.26□□□□□ -2.05
CCDC7-209ENST00000539197 C12orf66Q96MD2 445 aa2.26□□□□□ -2.05
CCDC7-209ENST00000539197 NAT9Q9BTE0 207 aa2.26□□□□□ -2.05
CCDC7-209ENST00000539197 KRT23Q9C075 422 aa2.26□□□□□ -2.05
CCDC7-209ENST00000539197 DEC1Q9P2X7 70 aa2.26□□□□□ -2.05
CCDC7-209ENST00000539197 MARCOQ9UEW3 520 aaPredicted RBP2.26□□□□□ -2.05
CCDC7-209ENST00000539197 ABCC9O60706 1549 aa2.26□□□□□ -2.05
CCDC7-209ENST00000539197 PPIAL4EA0A075B759 164 aa2.25□□□□□ -2.05
CCDC7-209ENST00000539197 IGHV1OR21-1A0A087WYE8 117 aa2.25□□□□□ -2.05
CCDC7-209ENST00000539197 A0A0G2JLM5 398 aa2.25□□□□□ -2.05
CCDC7-209ENST00000539197 A0A1W2PNV4 684 aa2.25□□□□□ -2.05
CCDC7-209ENST00000539197 E9PBE3 544 aa2.25□□□□□ -2.05
CCDC7-209ENST00000539197 PPIAL4DF5H284 164 aa2.25□□□□□ -2.05
CCDC7-209ENST00000539197 MBD3O95983 291 aa2.25□□□□□ -2.05
CCDC7-209ENST00000539197 MOSP00540 346 aa2.25□□□□□ -2.05
CCDC7-209ENST00000539197 PPIAL4FP0DN26 164 aa2.25□□□□□ -2.05
CCDC7-209ENST00000539197 RNASE2P10153 161 aaKnown RBP2.25□□□□□ -2.05
CCDC7-209ENST00000539197 CYP2F1P24903 491 aa2.25□□□□□ -2.05
CCDC7-209ENST00000539197 OTX2P32243 289 aa2.25□□□□□ -2.05
CCDC7-209ENST00000539197 HPCAL1P37235 193 aa2.25□□□□□ -2.05
CCDC7-209ENST00000539197 SLC26A3P40879 764 aa2.25□□□□□ -2.05
CCDC7-209ENST00000539197 GLP1RP43220 463 aa2.25□□□□□ -2.05
CCDC7-209ENST00000539197 CAMLGP49069 296 aa2.25□□□□□ -2.05
CCDC7-209ENST00000539197 DEFB116Q30KQ4 102 aa2.25□□□□□ -2.05
CCDC7-209ENST00000539197 KRTAP13-2Q52LG2 175 aa2.25□□□□□ -2.05
CCDC7-209ENST00000539197 TIGD3Q6B0B8 471 aa2.25□□□□□ -2.05
CCDC7-209ENST00000539197 CBLN3Q6UW01 205 aa2.25□□□□□ -2.05
CCDC7-209ENST00000539197 RFLNAQ6ZTI6 216 aa2.25□□□□□ -2.05
CCDC7-209ENST00000539197 RALGPS2Q86X27 583 aaPredicted RBP2.25□□□□□ -2.05
CCDC7-209ENST00000539197 MYOCDQ8IZQ8 938 aa2.25□□□□□ -2.05
CCDC7-209ENST00000539197 OR10G3Q8NGC4 313 aa2.25□□□□□ -2.05
CCDC7-209ENST00000539197 OR5L2Q8NGL0 311 aa2.25□□□□□ -2.05
CCDC7-209ENST00000539197 OR9G1Q8NH87 305 aa2.25□□□□□ -2.05
CCDC7-209ENST00000539197 SEC22AQ96IW7 307 aa2.25□□□□□ -2.05
CCDC7-209ENST00000539197 LINC00477Q96M19 166 aa2.25□□□□□ -2.05
CCDC7-209ENST00000539197 P2RY13Q9BPV8 354 aa2.25□□□□□ -2.05
CCDC7-209ENST00000539197 GPR61Q9BZJ8 451 aa2.25□□□□□ -2.05
CCDC7-209ENST00000539197 RSPH9Q9H1X1 276 aaPredicted RBP2.25□□□□□ -2.05
CCDC7-209ENST00000539197 C1orf21Q9H246 121 aa2.25□□□□□ -2.05
CCDC7-209ENST00000539197 RHBGQ9H310 441 aa2.25□□□□□ -2.05
CCDC7-209ENST00000539197 GNG12Q9UBI6 72 aa2.25□□□□□ -2.05
CCDC7-209ENST00000539197 TBK1Q9UHD2 729 aa2.25□□□□□ -2.05
CCDC7-209ENST00000539197 COPS3Q9UNS2 423 aa2.25□□□□□ -2.05
CCDC7-209ENST00000539197 COLCA2A8K830 154 aa2.24□□□□□ -2.05
CCDC7-209ENST00000539197 AGPAT2O15120 278 aa2.24□□□□□ -2.05
CCDC7-209ENST00000539197 CTAGE5O15320 804 aa2.24□□□□□ -2.05
CCDC7-209ENST00000539197 TPST2O60704 377 aa2.24□□□□□ -2.05
CCDC7-209ENST00000539197 N4BP1O75113 896 aaKnown RBP2.24□□□□□ -2.05
CCDC7-209ENST00000539197 PTBP3O95758 552 aaKnown RBP2.24□□□□□ -2.05
CCDC7-209ENST00000539197 LGALS2P05162 132 aa2.24□□□□□ -2.05
CCDC7-209ENST00000539197 CALCBP10092 127 aa2.24□□□□□ -2.05
CCDC7-209ENST00000539197 CELP19835 753 aa2.24□□□□□ -2.05
CCDC7-209ENST00000539197 TPSB2P20231 275 aa2.24□□□□□ -2.05
CCDC7-209ENST00000539197 MAPK3P27361 379 aaPredicted RBP2.24□□□□□ -2.05
CCDC7-209ENST00000539197 FMO3P31513 532 aa2.24□□□□□ -2.05
CCDC7-209ENST00000539197 RFC4P35249 363 aa2.24□□□□□ -2.05
CCDC7-209ENST00000539197 VDAC2P45880 294 aaPredicted RBP2.24□□□□□ -2.05
CCDC7-209ENST00000539197 PLA2G16P53816 162 aa2.24□□□□□ -2.05
CCDC7-209ENST00000539197 HSD17B7P56937 341 aa2.24□□□□□ -2.05
CCDC7-209ENST00000539197 PDZK1IP1Q13113 114 aa2.24□□□□□ -2.05
CCDC7-209ENST00000539197 TPSAB1Q15661 275 aa2.24□□□□□ -2.05
CCDC7-209ENST00000539197 FAM83EQ2M2I3 478 aa2.24□□□□□ -2.05
CCDC7-209ENST00000539197 ABCA11PQ4W5N1 156 aa2.24□□□□□ -2.05
CCDC7-209ENST00000539197 SAMD4BQ5PRF9 694 aaKnown RBP2.24□□□□□ -2.05
CCDC7-209ENST00000539197 CALHM3Q86XJ0 350 aa2.24□□□□□ -2.05
CCDC7-209ENST00000539197 MFSD6LQ8IWD5 586 aa2.24□□□□□ -2.05
CCDC7-209ENST00000539197 CLDN19Q8N6F1 224 aa2.24□□□□□ -2.05
CCDC7-209ENST00000539197 CNNM3Q8NE01 707 aa2.24□□□□□ -2.05
CCDC7-209ENST00000539197 UBE2Q2Q8WVN8 375 aa2.24□□□□□ -2.05
CCDC7-209ENST00000539197 HTR3CQ8WXA8 447 aa2.24□□□□□ -2.05
CCDC7-209ENST00000539197 ARPC1AQ92747 370 aa2.24□□□□□ -2.05
CCDC7-209ENST00000539197 MRPL13Q9BYD1 178 aaKnown RBP2.24□□□□□ -2.05
CCDC7-209ENST00000539197 HSD3B7Q9H2F3 369 aa2.24□□□□□ -2.05
CCDC7-209ENST00000539197 IFI27L2Q9H2X8 130 aa2.24□□□□□ -2.05
CCDC7-209ENST00000539197 FOLH1BQ9HBA9 442 aa2.24□□□□□ -2.05
CCDC7-209ENST00000539197 OPN4Q9UHM6 478 aa2.24□□□□□ -2.05
CCDC7-209ENST00000539197 GSTK1Q9Y2Q3 226 aa2.24□□□□□ -2.05
CCDC7-209ENST00000539197 A0A0G2JN53 185 aa2.23□□□□□ -2.05
CCDC7-209ENST00000539197 IQANK1A0A1B0GTG1 560 aa2.23□□□□□ -2.05
CCDC7-209ENST00000539197 A0A1B0GUS0 222 aa2.23□□□□□ -2.05
CCDC7-209ENST00000539197 TRDCB7Z8K6 153 aa2.23□□□□□ -2.05
CCDC7-209ENST00000539197 NPIPA7E9PJI5 369 aa2.23□□□□□ -2.05
CCDC7-209ENST00000539197 CHADO15335 359 aa2.23□□□□□ -2.05
CCDC7-209ENST00000539197 RS1O15537 224 aa2.23□□□□□ -2.05
CCDC7-209ENST00000539197 TRIM16O95361 564 aa2.23□□□□□ -2.05
CCDC7-209ENST00000539197 DCNP07585 359 aaKnown RBP2.23□□□□□ -2.05
CCDC7-209ENST00000539197 NPIPA8P0DM63 369 aa2.23□□□□□ -2.05
CCDC7-209ENST00000539197 CXCR2P25025 360 aa2.23□□□□□ -2.05
CCDC7-209ENST00000539197 CALCRP30988 508 aa2.23□□□□□ -2.05
CCDC7-209ENST00000539197 KIR2DS4P43632 304 aa2.23□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms