RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 CCT7Q99832 543 aa6.72□□□□□ -1.33
NXF1-215ENST00000533440 OR11A1Q9GZK7 315 aa6.72□□□□□ -1.33
NXF1-215ENST00000533440 NELFAQ9H3P2 528 aa6.72□□□□□ -1.33
NXF1-215ENST00000533440 TPK1Q9H3S4 243 aa6.72□□□□□ -1.33
NXF1-215ENST00000533440 UNKLQ9H9P5 680 aaKnown RBP6.72□□□□□ -1.33
NXF1-215ENST00000533440 MOV10Q9HCE1 1003 aaKnown RBP6.72□□□□□ -1.33
NXF1-215ENST00000533440 DYNLRB1Q9NP97 96 aa6.72□□□□□ -1.33
NXF1-215ENST00000533440 MID1IP1Q9NPA3 183 aa6.72□□□□□ -1.33
NXF1-215ENST00000533440 SLC52A3Q9NQ40 469 aa6.72□□□□□ -1.33
NXF1-215ENST00000533440 DDX28Q9NUL7 540 aaKnown RBP6.72□□□□□ -1.33
NXF1-215ENST00000533440 TMEM45AQ9NWC5 275 aa6.72□□□□□ -1.33
NXF1-215ENST00000533440 TREM2Q9NZC2 230 aa6.72□□□□□ -1.33
NXF1-215ENST00000533440 NINJ2Q9NZG7 142 aa6.72□□□□□ -1.33
NXF1-215ENST00000533440 UTP11Q9Y3A2 253 aaKnown RBP6.72□□□□□ -1.33
NXF1-215ENST00000533440 CENPVL1A0A0U1RR11 272 aa6.71□□□□□ -1.34
NXF1-215ENST00000533440 POM121CA8CG34 1229 aa6.71□□□□□ -1.34
NXF1-215ENST00000533440 TRIM49D1C9J1S8 452 aa6.71□□□□□ -1.34
NXF1-215ENST00000533440 H3BQF6 201 aa6.71□□□□□ -1.34
NXF1-215ENST00000533440 NR5A2O00482 541 aa6.71□□□□□ -1.34
NXF1-215ENST00000533440 UGT2B17O75795 530 aa6.71□□□□□ -1.34
NXF1-215ENST00000533440 CYP7B1O75881 506 aa6.71□□□□□ -1.34
NXF1-215ENST00000533440 LGI1O95970 557 aa6.71□□□□□ -1.34
NXF1-215ENST00000533440 CSTAP01040 98 aa6.71□□□□□ -1.34
NXF1-215ENST00000533440 FSHBP01225 129 aa6.71□□□□□ -1.34
NXF1-215ENST00000533440 HPXP02790 462 aa6.71□□□□□ -1.34
NXF1-215ENST00000533440 KRT16P08779 473 aa6.71□□□□□ -1.34
NXF1-215ENST00000533440 UBTFL6P0CB48 400 aaPredicted RBP6.71□□□□□ -1.34
NXF1-215ENST00000533440 IMPDH2P12268 514 aa6.71□□□□□ -1.34
NXF1-215ENST00000533440 EFNA1P20827 205 aaPredicted RBP6.71□□□□□ -1.34
NXF1-215ENST00000533440 PGM1P36871 562 aa6.71□□□□□ -1.34
NXF1-215ENST00000533440 CCT3P49368 545 aaKnown RBP6.71□□□□□ -1.34
NXF1-215ENST00000533440 EVX1P49640 407 aa6.71□□□□□ -1.34
NXF1-215ENST00000533440 UBE2NP61088 152 aaKnown RBP6.71□□□□□ -1.34
NXF1-215ENST00000533440 SLC35A1P78382 337 aa6.71□□□□□ -1.34
NXF1-215ENST00000533440 MYBPC1Q00872 1141 aa6.71□□□□□ -1.34
NXF1-215ENST00000533440 BLOC1S3Q6QNY0 202 aa6.71□□□□□ -1.34
NXF1-215ENST00000533440 PAQR6Q6TCH4 344 aa6.71□□□□□ -1.34
NXF1-215ENST00000533440 EIF3MQ7L2H7 374 aaKnown RBP6.71□□□□□ -1.34
NXF1-215ENST00000533440 AAED1Q7RTV5 226 aa6.71□□□□□ -1.34
NXF1-215ENST00000533440 MYPOPQ86VE0 399 aaPredicted RBP6.71□□□□□ -1.34
NXF1-215ENST00000533440 RIBC1Q8N443 379 aaPredicted RBP6.71□□□□□ -1.34
NXF1-215ENST00000533440 OR56A1Q8NGH5 318 aa6.71□□□□□ -1.34
NXF1-215ENST00000533440 DCAKDQ8WVC6 231 aa6.71□□□□□ -1.34
NXF1-215ENST00000533440 RDH5Q92781 318 aa6.71□□□□□ -1.34
NXF1-215ENST00000533440 AURKBQ96GD4 344 aaPredicted RBP6.71□□□□□ -1.34
NXF1-215ENST00000533440 ZNF385AQ96PM9 386 aaKnown RBP6.71□□□□□ -1.34
NXF1-215ENST00000533440 TSSK3Q96PN8 268 aa6.71□□□□□ -1.34
NXF1-215ENST00000533440 OR7D2Q96RA2 312 aa6.71□□□□□ -1.34
NXF1-215ENST00000533440 NAPGQ99747 312 aaPredicted RBP6.71□□□□□ -1.34
NXF1-215ENST00000533440 NAA11Q9BSU3 229 aaPredicted RBP6.71□□□□□ -1.34
NXF1-215ENST00000533440 SF3B5Q9BWJ5 86 aaKnown RBP6.71□□□□□ -1.34
NXF1-215ENST00000533440 RAB17Q9H0T7 212 aa6.71□□□□□ -1.34
NXF1-215ENST00000533440 SLITRK2Q9H156 845 aa6.71□□□□□ -1.34
NXF1-215ENST00000533440 PIF1Q9H611 641 aa6.71□□□□□ -1.34
NXF1-215ENST00000533440 NARFLQ9H6Q4 476 aa6.71□□□□□ -1.34
NXF1-215ENST00000533440 NTN4Q9HB63 628 aa6.71□□□□□ -1.34
NXF1-215ENST00000533440 TNFRSF12AQ9NP84 129 aa6.71□□□□□ -1.34
NXF1-215ENST00000533440 C1orf109Q9NX04 203 aa6.71□□□□□ -1.34
NXF1-215ENST00000533440 BAIAP2L1Q9UHR4 511 aa6.71□□□□□ -1.34
NXF1-215ENST00000533440 ZNF180Q9UJW8 692 aa6.71□□□□□ -1.34
NXF1-215ENST00000533440 FAF1Q9UNN5 650 aaPredicted RBP6.71□□□□□ -1.34
NXF1-215ENST00000533440 PTGDR2Q9Y5Y4 395 aa6.71□□□□□ -1.34
NXF1-215ENST00000533440 NBEAL2Q6ZNJ1 2754 aa6.71□□□□□ -1.34
NXF1-215ENST00000533440 NUP214P35658 2090 aaPredicted RBP6.7□□□□□ -1.34
NXF1-215ENST00000533440 IGHV2OR16-5A0A0B4J2B6 119 aa6.7□□□□□ -1.34
NXF1-215ENST00000533440 A0A0G2JMP0 313 aa6.7□□□□□ -1.34
NXF1-215ENST00000533440 A0A0X1KG70 313 aa6.7□□□□□ -1.34
NXF1-215ENST00000533440 OR6C65A6NJZ3 312 aa6.7□□□□□ -1.34
NXF1-215ENST00000533440 ZNF587BE7ETH6 402 aa6.7□□□□□ -1.34
NXF1-215ENST00000533440 J3QLI3 93 aa6.7□□□□□ -1.34
NXF1-215ENST00000533440 ZNF208O43345 1280 aa6.7□□□□□ -1.34
NXF1-215ENST00000533440 SYNGR3O43761 229 aa6.7□□□□□ -1.34
NXF1-215ENST00000533440 FCMRO60667 390 aa6.7□□□□□ -1.34
NXF1-215ENST00000533440 BCAS1O75363 584 aaPredicted RBP6.7□□□□□ -1.34
NXF1-215ENST00000533440 RP2O75695 350 aa6.7□□□□□ -1.34
NXF1-215ENST00000533440 CELA3BP08861 270 aa6.7□□□□□ -1.34
NXF1-215ENST00000533440 ANPEPP15144 967 aa6.7□□□□□ -1.34
NXF1-215ENST00000533440 CBR1P16152 277 aa6.7□□□□□ -1.34
NXF1-215ENST00000533440 ADRA2CP18825 462 aa6.7□□□□□ -1.34
NXF1-215ENST00000533440 PRTN3P24158 256 aa6.7□□□□□ -1.34
NXF1-215ENST00000533440 ZFP36P26651 326 aaKnown RBP6.7□□□□□ -1.34
NXF1-215ENST00000533440 TUBA1BP68363 451 aa6.7□□□□□ -1.34
NXF1-215ENST00000533440 TUBA4AP68366 448 aa6.7□□□□□ -1.34
NXF1-215ENST00000533440 MRPS11P82912 194 aaKnown RBP6.7□□□□□ -1.34
NXF1-215ENST00000533440 TP53BP2Q13625 1128 aa6.7□□□□□ -1.34
NXF1-215ENST00000533440 GPR68Q15743 365 aa6.7□□□□□ -1.34
NXF1-215ENST00000533440 MAPK14Q16539 360 aa6.7□□□□□ -1.34
NXF1-215ENST00000533440 MSMPQ1L6U9 139 aa6.7□□□□□ -1.34
NXF1-215ENST00000533440 RFTN2Q52LD8 501 aaPredicted RBP6.7□□□□□ -1.34
NXF1-215ENST00000533440 ACSM5Q6NUN0 579 aa6.7□□□□□ -1.34
NXF1-215ENST00000533440 EMBQ6PCB8 327 aa6.7□□□□□ -1.34
NXF1-215ENST00000533440 TIFABQ6ZNK6 161 aa6.7□□□□□ -1.34
NXF1-215ENST00000533440 TUBA1AQ71U36 451 aa6.7□□□□□ -1.34
NXF1-215ENST00000533440 LINGO2Q7L985 606 aa6.7□□□□□ -1.34
NXF1-215ENST00000533440 R3HCC1LQ7Z5L2 792 aaKnown RBP6.7□□□□□ -1.34
NXF1-215ENST00000533440 LCA5Q86VQ0 697 aa6.7□□□□□ -1.34
NXF1-215ENST00000533440 RELL1Q8IUW5 271 aa6.7□□□□□ -1.34
NXF1-215ENST00000533440 BPIFB2Q8N4F0 458 aa6.7□□□□□ -1.34
NXF1-215ENST00000533440 OR4M2Q8NGB6 313 aa6.7□□□□□ -1.34
NXF1-215ENST00000533440 OR9K2Q8NGE7 335 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms