RNA–Protein interactions for RNA: ENST00000533222.5

CD44-236, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-236ENST00000533222 DUOXA1Q1HG43 343 aa5.06□□□□□ -1.6
CD44-236ENST00000533222 LGALSLQ3ZCW2 172 aaPredicted RBP5.06□□□□□ -1.6
CD44-236ENST00000533222 CBWD6Q4V339 395 aa5.06□□□□□ -1.6
CD44-236ENST00000533222 PYY3Q5JQD4 70 aa5.06□□□□□ -1.6
CD44-236ENST00000533222 SAMD4BQ5PRF9 694 aaKnown RBP5.06□□□□□ -1.6
CD44-236ENST00000533222 CARD17Q5XLA6 110 aa5.06□□□□□ -1.6
CD44-236ENST00000533222 GTF2H2CQ6P1K8 395 aa5.06□□□□□ -1.6
CD44-236ENST00000533222 TMEM270Q6UE05 265 aa5.06□□□□□ -1.6
CD44-236ENST00000533222 PRSS55Q6UWB4 352 aaPredicted RBP5.06□□□□□ -1.6
CD44-236ENST00000533222 CLEC18BQ6UXF7 455 aa5.06□□□□□ -1.6
CD44-236ENST00000533222 QSOX2Q6ZRP7 698 aa5.06□□□□□ -1.6
CD44-236ENST00000533222 H2AFVQ71UI9 128 aa5.06□□□□□ -1.6
CD44-236ENST00000533222 ABHD13Q7L211 337 aa5.06□□□□□ -1.6
CD44-236ENST00000533222 TECPR1Q7Z6L1 1165 aa5.06□□□□□ -1.6
CD44-236ENST00000533222 CATSPERDQ86XM0 798 aa5.06□□□□□ -1.6
CD44-236ENST00000533222 MMP21Q8N119 569 aa5.06□□□□□ -1.6
CD44-236ENST00000533222 Q8N1X5 172 aa5.06□□□□□ -1.6
CD44-236ENST00000533222 OR2C3Q8N628 320 aa5.06□□□□□ -1.6
CD44-236ENST00000533222 CLDN22Q8N7P3 220 aa5.06□□□□□ -1.6
CD44-236ENST00000533222 NECAP1Q8NC96 275 aa5.06□□□□□ -1.6
CD44-236ENST00000533222 TMEM161BQ8NDZ6 487 aa5.06□□□□□ -1.6
CD44-236ENST00000533222 OR5L2Q8NGL0 311 aa5.06□□□□□ -1.6
CD44-236ENST00000533222 OR10R2Q8NGX6 335 aa5.06□□□□□ -1.6
CD44-236ENST00000533222 OR8U1Q8NH10 309 aa5.06□□□□□ -1.6
CD44-236ENST00000533222 OR4C6Q8NH72 309 aa5.06□□□□□ -1.6
CD44-236ENST00000533222 TMEM163Q8TC26 289 aa5.06□□□□□ -1.6
CD44-236ENST00000533222 TFB1MQ8WVM0 346 aaKnown RBP5.06□□□□□ -1.6
CD44-236ENST00000533222 TAAR8Q969N4 342 aa5.06□□□□□ -1.6
CD44-236ENST00000533222 RCN3Q96D15 328 aa5.06□□□□□ -1.6
CD44-236ENST00000533222 BPIFA2Q96DR5 249 aa5.06□□□□□ -1.6
CD44-236ENST00000533222 ZNF764Q96H86 408 aaPredicted RBP5.06□□□□□ -1.6
CD44-236ENST00000533222 TRIB1Q96RU8 372 aa5.06□□□□□ -1.6
CD44-236ENST00000533222 EPYCQ99645 322 aa5.06□□□□□ -1.6
CD44-236ENST00000533222 GINS4Q9BRT9 223 aa5.06□□□□□ -1.6
CD44-236ENST00000533222 ALG8Q9BVK2 526 aa5.06□□□□□ -1.6
CD44-236ENST00000533222 SPATA5L1Q9BVQ7 753 aa5.06□□□□□ -1.6
CD44-236ENST00000533222 SORBS1Q9BX66 1292 aaKnown RBP5.06□□□□□ -1.6
CD44-236ENST00000533222 KRTAP9-3Q9BYQ3 159 aa5.06□□□□□ -1.6
CD44-236ENST00000533222 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.06□□□□□ -1.6
CD44-236ENST00000533222 SPHK2Q9NRA0 654 aa5.06□□□□□ -1.6
CD44-236ENST00000533222 CHRAC1Q9NRG0 131 aa5.06□□□□□ -1.6
CD44-236ENST00000533222 CNIH4Q9P003 139 aa5.06□□□□□ -1.6
CD44-236ENST00000533222 ARMCX1Q9P291 453 aa5.06□□□□□ -1.6
CD44-236ENST00000533222 RHCGQ9UBD6 479 aa5.06□□□□□ -1.6
CD44-236ENST00000533222 IL20RAQ9UHF4 553 aa5.06□□□□□ -1.6
CD44-236ENST00000533222 KCNE5Q9UJ90 142 aa5.06□□□□□ -1.6
CD44-236ENST00000533222 GNG8Q9UK08 70 aa5.06□□□□□ -1.6
CD44-236ENST00000533222 ZNF225Q9UK10 706 aa5.06□□□□□ -1.6
CD44-236ENST00000533222 NPIPA1Q9UND3 350 aa5.06□□□□□ -1.6
CD44-236ENST00000533222 TNFRSF18Q9Y5U5 241 aa5.06□□□□□ -1.6
CD44-236ENST00000533222 MRPS18BQ9Y676 258 aaKnown RBP5.06□□□□□ -1.6
CD44-236ENST00000533222 POMT1Q9Y6A1 747 aa5.06□□□□□ -1.6
CD44-236ENST00000533222 LMTK3Q96Q04 1460 aa5.06□□□□□ -1.6
CD44-236ENST00000533222 ADAMTSL3P82987 1691 aa5.05□□□□□ -1.6
CD44-236ENST00000533222 TRAV8-7A0A075B6U6 113 aa5.05□□□□□ -1.6
CD44-236ENST00000533222 A0A087WV62 115 aa5.05□□□□□ -1.6
CD44-236ENST00000533222 TBC1D3DA0A087WVF3 549 aa5.05□□□□□ -1.6
CD44-236ENST00000533222 TBC1D3IA0A087WXS9 549 aa5.05□□□□□ -1.6
CD44-236ENST00000533222 TBC1D3EA0A087X179 549 aa5.05□□□□□ -1.6
CD44-236ENST00000533222 CCDC195A0A1B0GUA6 201 aa5.05□□□□□ -1.6
CD44-236ENST00000533222 FAM237BA0A1B0GVD1 139 aa5.05□□□□□ -1.6
CD44-236ENST00000533222 TMEM269A0A1B0GVZ9 245 aa5.05□□□□□ -1.6
CD44-236ENST00000533222 A0A1W2PPV4 95 aa5.05□□□□□ -1.6
CD44-236ENST00000533222 C20orf202A1L168 122 aa5.05□□□□□ -1.6
CD44-236ENST00000533222 GAGE12BA1L429 117 aa5.05□□□□□ -1.6
CD44-236ENST00000533222 TMEM213A2RRL7 107 aa5.05□□□□□ -1.6
CD44-236ENST00000533222 GAGE12HA6NDE8 117 aa5.05□□□□□ -1.6
CD44-236ENST00000533222 TRIM49BA6NDI0 452 aa5.05□□□□□ -1.6
CD44-236ENST00000533222 TBC1D3LB9A6J9 549 aa5.05□□□□□ -1.6
CD44-236ENST00000533222 DISC1C4P0D8 188 aa5.05□□□□□ -1.6
CD44-236ENST00000533222 H3BNC9 293 aa5.05□□□□□ -1.6
CD44-236ENST00000533222 K7ERU9 68 aa5.05□□□□□ -1.6
CD44-236ENST00000533222 UPK1AO00322 258 aa5.05□□□□□ -1.6
CD44-236ENST00000533222 FABP7O15540 132 aa5.05□□□□□ -1.6
CD44-236ENST00000533222 RGS14O43566 566 aa5.05□□□□□ -1.6
CD44-236ENST00000533222 PRAMEF2O60811 474 aa5.05□□□□□ -1.6
CD44-236ENST00000533222 PQBP1O60828 265 aaKnown RBP5.05□□□□□ -1.6
CD44-236ENST00000533222 OR2J2O76002 312 aa5.05□□□□□ -1.6
CD44-236ENST00000533222 VNN2O95498 520 aa5.05□□□□□ -1.6
CD44-236ENST00000533222 TOMM40O96008 361 aa5.05□□□□□ -1.6
CD44-236ENST00000533222 GCGP01275 180 aa5.05□□□□□ -1.6
CD44-236ENST00000533222 APODP05090 189 aa5.05□□□□□ -1.6
CD44-236ENST00000533222 PCCBP05166 539 aa5.05□□□□□ -1.6
CD44-236ENST00000533222 GRPP07492 148 aa5.05□□□□□ -1.6
CD44-236ENST00000533222 OR5AC1P0C628 307 aa5.05□□□□□ -1.6
CD44-236ENST00000533222 CSH1P0DML2 217 aa5.05□□□□□ -1.6
CD44-236ENST00000533222 CSH2P0DML3 217 aa5.05□□□□□ -1.6
CD44-236ENST00000533222 SMIM10L1P0DMW3 83 aa5.05□□□□□ -1.6
CD44-236ENST00000533222 MYF5P13349 255 aa5.05□□□□□ -1.6
CD44-236ENST00000533222 ABOP16442 354 aa5.05□□□□□ -1.6
CD44-236ENST00000533222 UGT2B7P16662 529 aa5.05□□□□□ -1.6
CD44-236ENST00000533222 HLA-GP17693 338 aa5.05□□□□□ -1.6
CD44-236ENST00000533222 ENGP17813 658 aa5.05□□□□□ -1.6
CD44-236ENST00000533222 TBPP20226 339 aa5.05□□□□□ -1.6
CD44-236ENST00000533222 EFNA1P20827 205 aaPredicted RBP5.05□□□□□ -1.6
CD44-236ENST00000533222 FDXRP22570 491 aa5.05□□□□□ -1.6
CD44-236ENST00000533222 ANOS1P23352 680 aa5.05□□□□□ -1.6
CD44-236ENST00000533222 MPZP25189 248 aa5.05□□□□□ -1.6
CD44-236ENST00000533222 ELK4P28324 431 aa5.05□□□□□ -1.6
CD44-236ENST00000533222 SSTR2P30874 369 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms