RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 RPS3AP61247 264 aaKnown RBP4.08□□□□□ -1.76
USP48-211ENST00000526044 FOLH1Q04609 750 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 LRRC74AQ0VAA2 488 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 EPS8Q12929 822 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 STX5Q13190 355 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 DCTN2Q13561 401 aaKnown RBP4.08□□□□□ -1.76
USP48-211ENST00000526044 PDE7AQ13946 482 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 CYLC2Q14093 348 aaPredicted RBP4.08□□□□□ -1.76
USP48-211ENST00000526044 SERTAD2Q14140 314 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 LASP1Q14847 261 aaKnown RBP4.08□□□□□ -1.76
USP48-211ENST00000526044 NCF4Q15080 339 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 MAPRE2Q15555 327 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 FAM174BQ3ZCQ3 159 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 SPANXN4Q5MJ08 99 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 OR4F3Q6IEY1 312 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 OR52E8Q6IFG1 317 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 ANKRD26P1Q6NSI1 321 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 KLHL24Q6TFL4 600 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 QSOX2Q6ZRP7 698 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 SHISA6Q6ZSJ9 500 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 COX15Q7KZN9 410 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 TRPM8Q7Z2W7 1104 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 LURAP1LQ8IV03 231 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 FUNDC1Q8IVP5 155 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 PRSS58Q8IYP2 241 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 OR8J2Q8NGG1 315 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 OR9I1Q8NGQ6 314 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 FAM216AQ8WUB2 273 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 CT55Q8WUE5 264 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 GIMAP1Q8WWP7 306 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 OR5P2Q8WZ92 322 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 FGF11Q92914 225 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 EXOSC8Q96B26 276 aaKnown RBP4.08□□□□□ -1.76
USP48-211ENST00000526044 ANKRD9Q96BM1 317 aaPredicted RBP4.08□□□□□ -1.76
USP48-211ENST00000526044 TESCQ96BS2 214 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 KLHL29Q96CT2 875 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 NXPE2Q96DL1 559 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 CMTM5Q96DZ9 223 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 SPDL1Q96EA4 605 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 CNRIP1Q96F85 164 aaPredicted RBP4.08□□□□□ -1.76
USP48-211ENST00000526044 NSL1Q96IY1 281 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 ITCHQ96J02 903 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 ZNF681Q96N22 645 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 DGAT2Q96PD7 388 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 CSF3RQ99062 836 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 SLC25A33Q9BSK2 321 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 SLC25A23Q9BV35 468 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 ZFHX2Q9C0A1 2572 aaPredicted RBP4.08□□□□□ -1.76
USP48-211ENST00000526044 ACTL8Q9H568 366 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 CLMPQ9H6B4 373 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 RMND5AQ9H871 391 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 WDR54Q9H977 334 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 EFCAB1Q9HAE3 211 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 ASCL3Q9NQ33 180 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 C14orf105Q9NVL8 296 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 ADPRHL2Q9NX46 363 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.08□□□□□ -1.76
USP48-211ENST00000526044 ARMCX1Q9P291 453 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 PEMTQ9UBM1 199 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 CTSFQ9UBX1 484 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 NDRG3Q9UGV2 375 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 C3orf18Q9UK00 162 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 ENTPD4Q9Y227 616 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 PADI2Q9Y2J8 665 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 NDUFAF1Q9Y375 327 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 PTRH2Q9Y3E5 179 aaKnown RBP4.08□□□□□ -1.76
USP48-211ENST00000526044 MMACHCQ9Y4U1 282 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 CAPN7Q9Y6W3 813 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 WDR87Q6ZQQ6 2873 aa4.08□□□□□ -1.76
USP48-211ENST00000526044 SDK2Q58EX2 2172 aa4.07□□□□□ -1.76
USP48-211ENST00000526044 NUP210LQ5VU65 1888 aa4.07□□□□□ -1.76
USP48-211ENST00000526044 A0A0B4J203 849 aa4.07□□□□□ -1.76
USP48-211ENST00000526044 LOC101059948A0A1B0GTJ6 334 aa4.07□□□□□ -1.76
USP48-211ENST00000526044 A0A1W2PQ09 198 aa4.07□□□□□ -1.76
USP48-211ENST00000526044 CBY3A6NI87 242 aa4.07□□□□□ -1.76
USP48-211ENST00000526044 A8MUA0 341 aa4.07□□□□□ -1.76
USP48-211ENST00000526044 A8MXE2 369 aa4.07□□□□□ -1.76
USP48-211ENST00000526044 C9JVG2 144 aa4.07□□□□□ -1.76
USP48-211ENST00000526044 NR5A2O00482 541 aa4.07□□□□□ -1.76
USP48-211ENST00000526044 RFXANKO14593 260 aa4.07□□□□□ -1.76
USP48-211ENST00000526044 AIM2O14862 343 aa4.07□□□□□ -1.76
USP48-211ENST00000526044 ANGPT2O15123 496 aa4.07□□□□□ -1.76
USP48-211ENST00000526044 FGF17O60258 216 aa4.07□□□□□ -1.76
USP48-211ENST00000526044 OR10H2O60403 315 aa4.07□□□□□ -1.76
USP48-211ENST00000526044 SCN2BO60939 215 aa4.07□□□□□ -1.76
USP48-211ENST00000526044 ALOX12BO75342 701 aa4.07□□□□□ -1.76
USP48-211ENST00000526044 SERPINI2O75830 405 aa4.07□□□□□ -1.76
USP48-211ENST00000526044 KLF7O75840 302 aaPredicted RBP4.07□□□□□ -1.76
USP48-211ENST00000526044 ATP5HO75947 161 aa4.07□□□□□ -1.76
USP48-211ENST00000526044 ANP32DO95626 131 aa4.07□□□□□ -1.76
USP48-211ENST00000526044 C6orf47O95873 294 aa4.07□□□□□ -1.76
USP48-211ENST00000526044 NPPAP01160 153 aa4.07□□□□□ -1.76
USP48-211ENST00000526044 ABCB1P08183 1280 aaPredicted RBP4.07□□□□□ -1.76
USP48-211ENST00000526044 CYC1P08574 325 aa4.07□□□□□ -1.76
USP48-211ENST00000526044 LIPCP11150 499 aa4.07□□□□□ -1.76
USP48-211ENST00000526044 UBL4AP11441 157 aa4.07□□□□□ -1.76
USP48-211ENST00000526044 COX4I1P13073 169 aa4.07□□□□□ -1.76
USP48-211ENST00000526044 PLA2G2AP14555 144 aa4.07□□□□□ -1.76
USP48-211ENST00000526044 CD1EP15812 388 aa4.07□□□□□ -1.76
USP48-211ENST00000526044 RPS2P15880 293 aaKnown RBP4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms