RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 FGF11Q92914 225 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 MS4A6EQ96DS6 147 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 CMTM7Q96FZ5 175 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 SMIM10Q96HG1 83 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 EGLN2Q96KS0 407 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 GBP5Q96PP8 586 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 SERPINI1Q99574 410 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 C17orf62Q9BQA9 187 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 MS4A8Q9BY19 250 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 ULBP3Q9BZM4 244 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 SLC7A5P2Q9GIP4 190 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 C20orf27Q9GZN8 174 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 ILKAPQ9H0C8 392 aaPredicted RBP2.87□□□□□ -1.95
VPS13B-209ENST00000521559 ELOVL6Q9H5J4 265 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 MID1IP1Q9NPA3 183 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 STARD5Q9NSY2 213 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 CUTCQ9NTM9 273 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 NMRK1Q9NWW6 199 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 DHCR7Q9UBM7 475 aaKnown RBP2.87□□□□□ -1.95
VPS13B-209ENST00000521559 ZDHHC2Q9UIJ5 367 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 MRPS2Q9Y399 296 aaKnown RBP2.87□□□□□ -1.95
VPS13B-209ENST00000521559 TIMM22Q9Y584 194 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 MAGED1Q9Y5V3 778 aaPredicted RBP2.87□□□□□ -1.95
VPS13B-209ENST00000521559 SEC23IPQ9Y6Y8 1000 aaKnown RBP2.87□□□□□ -1.95
VPS13B-209ENST00000521559 PTPRZ1P23471 2315 aaPredicted RBP2.87□□□□□ -1.95
VPS13B-209ENST00000521559 ANKRD36A6QL64 1941 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 SCN8AQ9UQD0 1980 aa2.87□□□□□ -1.95
VPS13B-209ENST00000521559 EP300Q09472 2414 aaPredicted RBP2.87□□□□□ -1.95
VPS13B-209ENST00000521559 ZNF106Q9H2Y7 1883 aaKnown RBP2.86□□□□□ -1.95
VPS13B-209ENST00000521559 CACNA1EQ15878 2313 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 ZFHX2Q9C0A1 2572 aaPredicted RBP2.86□□□□□ -1.95
VPS13B-209ENST00000521559 IGLV3-12A0A075B6K2 115 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 A0A0A6YYC8 382 aaPredicted RBP2.86□□□□□ -1.95
VPS13B-209ENST00000521559 A0A0A6YYD5 115 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 A0A1B0GU03 582 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 TMEM8BA6NDV4 472 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 VSTM2BA6NLU5 285 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 MAGEB17A8MXT2 336 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 C21orf140B9A014 251 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 C9J4A7 227 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 SLCO1B7G3V0H7 640 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 H0YIG0 161 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 TMEM178BH3BS89 294 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 I3L1I5 382 aaPredicted RBP2.86□□□□□ -1.95
VPS13B-209ENST00000521559 SGK494L7N484 410 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 NDUFS4O43181 175 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 ERI3O43414 337 aaKnown RBP2.86□□□□□ -1.95
VPS13B-209ENST00000521559 CHST10O43529 356 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 GALR3O60755 368 aaPredicted RBP2.86□□□□□ -1.95
VPS13B-209ENST00000521559 DNAJB6O75190 326 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 LYPLA1O75608 230 aaPredicted RBP2.86□□□□□ -1.95
VPS13B-209ENST00000521559 SCELO95171 688 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 NSA2O95478 260 aaKnown RBP2.86□□□□□ -1.95
VPS13B-209ENST00000521559 ETHE1O95571 254 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 PDYNP01213 254 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 KLK1P06870 262 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 RAB40ALP0C0E4 278 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 LINC00032P0C843 101 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 LIPCP11150 499 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 IL1RNP18510 177 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 IL11P20809 199 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 ZNF10P21506 573 aaPredicted RBP2.86□□□□□ -1.95
VPS13B-209ENST00000521559 IL10P22301 178 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 ATP5A1P25705 553 aaKnown RBP2.86□□□□□ -1.95
VPS13B-209ENST00000521559 MDH1P40925 334 aaKnown RBP2.86□□□□□ -1.95
VPS13B-209ENST00000521559 TSFMP43897 325 aaKnown RBP2.86□□□□□ -1.95
VPS13B-209ENST00000521559 OR1D4P47884 311 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 RPL14P50914 215 aaKnown RBP2.86□□□□□ -1.95
VPS13B-209ENST00000521559 RAP1GDS1P52306 607 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 PLA2G16P53816 162 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 MTTPP55157 894 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 FOXA1P55317 472 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 RAB8AP61006 207 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 BTN3A2P78410 334 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 KCNJ10P78508 379 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 SLAMF1Q13291 335 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 DDX39BQ13838 428 aaKnown RBP2.86□□□□□ -1.95
VPS13B-209ENST00000521559 ABRAXAS2Q15018 415 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 NCF4Q15080 339 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 DEFB134Q4QY38 66 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 IGSF11Q5DX21 431 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 TCHHL1Q5QJ38 904 aaPredicted RBP2.86□□□□□ -1.95
VPS13B-209ENST00000521559 ZC2HC1BQ5TFG8 222 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 C1orf189Q5VU69 101 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 MLIPQ5VWP3 458 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 NSUN5P2Q63ZY6 315 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 TMEM198Q66K66 360 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 CLEC6AQ6EIG7 209 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 OR4C11Q6IEV9 310 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 TRIM40Q6P9F5 258 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 SCIMPQ6UWF3 145 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 PLXDC2Q6UX71 529 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 RGS9BPQ6ZS82 235 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 COX15Q7KZN9 410 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 KRT74Q7RTS7 529 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 MYPOPQ86VE0 399 aaPredicted RBP2.86□□□□□ -1.95
VPS13B-209ENST00000521559 LINC00346Q8IVM7 164 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 APLFQ8IW19 511 aaPredicted RBP2.86□□□□□ -1.95
VPS13B-209ENST00000521559 METTL4Q8N3J2 472 aa2.86□□□□□ -1.95
VPS13B-209ENST00000521559 ZCCHC7Q8N3Z6 543 aaKnown RBP2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms