RNA–Protein interactions for RNA: ENST00000521283.1

TRIM35-204, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-204ENST00000521283 ZNF607Q96SK3 696 aa9.09□□□□□ -0.95
TRIM35-204ENST00000521283 SH3GL1Q99961 368 aa9.09□□□□□ -0.95
TRIM35-204ENST00000521283 GPATCH1Q9BRR8 931 aaKnown RBP9.09□□□□□ -0.95
TRIM35-204ENST00000521283 NAA11Q9BSU3 229 aaPredicted RBP9.09□□□□□ -0.95
TRIM35-204ENST00000521283 SPATA9Q9BWV2 254 aa9.09□□□□□ -0.95
TRIM35-204ENST00000521283 POTEKPQ9BYX7 375 aa9.09□□□□□ -0.95
TRIM35-204ENST00000521283 OPN3Q9H1Y3 402 aaPredicted RBP9.09□□□□□ -0.95
TRIM35-204ENST00000521283 TMEM38AQ9H6F2 299 aa9.09□□□□□ -0.95
TRIM35-204ENST00000521283 COQ10BQ9H8M1 238 aa9.09□□□□□ -0.95
TRIM35-204ENST00000521283 PARPBPQ9NWS1 579 aa9.09□□□□□ -0.95
TRIM35-204ENST00000521283 TMEM181Q9P2C4 612 aa9.09□□□□□ -0.95
TRIM35-204ENST00000521283 NDUFAF1Q9Y375 327 aa9.09□□□□□ -0.95
TRIM35-204ENST00000521283 CSMD2Q7Z408 3487 aa9.08□□□□□ -0.96
TRIM35-204ENST00000521283 IGKV3D-15A0A087WSY6 115 aa9.08□□□□□ -0.96
TRIM35-204ENST00000521283 NR5A2O00482 541 aa9.08□□□□□ -0.96
TRIM35-204ENST00000521283 TMCC2O75069 709 aa9.08□□□□□ -0.96
TRIM35-204ENST00000521283 VAMP5O95183 116 aa9.08□□□□□ -0.96
TRIM35-204ENST00000521283 TFPIP10646 304 aa9.08□□□□□ -0.96
TRIM35-204ENST00000521283 CRYGSP22914 178 aa9.08□□□□□ -0.96
TRIM35-204ENST00000521283 SLC6A2P23975 617 aa9.08□□□□□ -0.96
TRIM35-204ENST00000521283 CXCR1P25024 350 aa9.08□□□□□ -0.96
TRIM35-204ENST00000521283 DNAJA1P31689 397 aaKnown RBP9.08□□□□□ -0.96
TRIM35-204ENST00000521283 MAPRE2Q15555 327 aa9.08□□□□□ -0.96
TRIM35-204ENST00000521283 NDUFAF6Q330K2 333 aa9.08□□□□□ -0.96
TRIM35-204ENST00000521283 C11orf91Q3C1V1 193 aa9.08□□□□□ -0.96
TRIM35-204ENST00000521283 COQ5Q5HYK3 327 aa9.08□□□□□ -0.96
TRIM35-204ENST00000521283 ZNF311Q5JNZ3 666 aa9.08□□□□□ -0.96
TRIM35-204ENST00000521283 GCNT6Q5T4J0 391 aa9.08□□□□□ -0.96
TRIM35-204ENST00000521283 SLC2A7Q6PXP3 512 aa9.08□□□□□ -0.96
TRIM35-204ENST00000521283 DNAJC14Q6Y2X3 702 aaPredicted RBP9.08□□□□□ -0.96
TRIM35-204ENST00000521283 GALNT5Q7Z7M9 940 aa9.08□□□□□ -0.96
TRIM35-204ENST00000521283 P2RY8Q86VZ1 359 aa9.08□□□□□ -0.96
TRIM35-204ENST00000521283 CDC20BQ86Y33 519 aa9.08□□□□□ -0.96
TRIM35-204ENST00000521283 ADGRG3Q86Y34 549 aa9.08□□□□□ -0.96
TRIM35-204ENST00000521283 ATP6V1C2Q8NEY4 427 aa9.08□□□□□ -0.96
TRIM35-204ENST00000521283 ROBO4Q8WZ75 1007 aa9.08□□□□□ -0.96
TRIM35-204ENST00000521283 CNOT9Q92600 299 aaKnown RBP9.08□□□□□ -0.96
TRIM35-204ENST00000521283 MBD6Q96DN6 1003 aa9.08□□□□□ -0.96
TRIM35-204ENST00000521283 NPAS1Q99742 590 aa9.08□□□□□ -0.96
TRIM35-204ENST00000521283 FOXC2Q99958 501 aa9.08□□□□□ -0.96
TRIM35-204ENST00000521283 ADAM19Q9H013 955 aa9.08□□□□□ -0.96
TRIM35-204ENST00000521283 C12orf10Q9HB07 376 aa9.08□□□□□ -0.96
TRIM35-204ENST00000521283 SLC52A3Q9NQ40 469 aa9.08□□□□□ -0.96
TRIM35-204ENST00000521283 CTPS2Q9NRF8 586 aa9.08□□□□□ -0.96
TRIM35-204ENST00000521283 SLC6A13Q9NSD5 602 aa9.08□□□□□ -0.96
TRIM35-204ENST00000521283 FGFR1OP2Q9NVK5 253 aa9.08□□□□□ -0.96
TRIM35-204ENST00000521283 KLHL28Q9NXS3 571 aa9.08□□□□□ -0.96
TRIM35-204ENST00000521283 ST6GALNAC2Q9UJ37 374 aa9.08□□□□□ -0.96
TRIM35-204ENST00000521283 TMED7-TICAM2A0A0A6YYA0 188 aa9.07□□□□□ -0.96
TRIM35-204ENST00000521283 A0A0G2JND7 137 aa9.07□□□□□ -0.96
TRIM35-204ENST00000521283 CENPVL1A0A0U1RR11 272 aa9.07□□□□□ -0.96
TRIM35-204ENST00000521283 A8MVM7 634 aa9.07□□□□□ -0.96
TRIM35-204ENST00000521283 SLC22A2O15244 555 aa9.07□□□□□ -0.96
TRIM35-204ENST00000521283 CCDC22O60826 627 aa9.07□□□□□ -0.96
TRIM35-204ENST00000521283 PGM3O95394 542 aa9.07□□□□□ -0.96
TRIM35-204ENST00000521283 OPN1LWP04000 364 aa9.07□□□□□ -0.96
TRIM35-204ENST00000521283 RAF1P04049 648 aa9.07□□□□□ -0.96
TRIM35-204ENST00000521283 HRGP04196 525 aa9.07□□□□□ -0.96
TRIM35-204ENST00000521283 GPIP06744 558 aa9.07□□□□□ -0.96
TRIM35-204ENST00000521283 HOXB9P17482 250 aaPredicted RBP9.07□□□□□ -0.96
TRIM35-204ENST00000521283 FPR1P21462 350 aa9.07□□□□□ -0.96
TRIM35-204ENST00000521283 PAX7P23759 505 aa9.07□□□□□ -0.96
TRIM35-204ENST00000521283 SLC16A1P53985 500 aa9.07□□□□□ -0.96
TRIM35-204ENST00000521283 KRTAP10-9P60411 292 aa9.07□□□□□ -0.96
TRIM35-204ENST00000521283 CDK6Q00534 326 aa9.07□□□□□ -0.96
TRIM35-204ENST00000521283 ITGADQ13349 1161 aa9.07□□□□□ -0.96
TRIM35-204ENST00000521283 CYLC2Q14093 348 aaPredicted RBP9.07□□□□□ -0.96
TRIM35-204ENST00000521283 BEX5Q5H9J7 111 aa9.07□□□□□ -0.96
TRIM35-204ENST00000521283 PLXDC2Q6UX71 529 aa9.07□□□□□ -0.96
TRIM35-204ENST00000521283 Q6ZT83 130 aa9.07□□□□□ -0.96
TRIM35-204ENST00000521283 LURAP1LQ8IV03 231 aa9.07□□□□□ -0.96
TRIM35-204ENST00000521283 TUSC5Q8IXB3 177 aa9.07□□□□□ -0.96
TRIM35-204ENST00000521283 HIPK4Q8NE63 616 aa9.07□□□□□ -0.96
TRIM35-204ENST00000521283 STK35Q8TDR2 534 aa9.07□□□□□ -0.96
TRIM35-204ENST00000521283 ABHD3Q8WU67 409 aa9.07□□□□□ -0.96
TRIM35-204ENST00000521283 RASSF5Q8WWW0 418 aa9.07□□□□□ -0.96
TRIM35-204ENST00000521283 HSD17B8Q92506 261 aa9.07□□□□□ -0.96
TRIM35-204ENST00000521283 WFIKKN1Q96NZ8 548 aa9.07□□□□□ -0.96
TRIM35-204ENST00000521283 ALPK1Q96QP1 1244 aa9.07□□□□□ -0.96
TRIM35-204ENST00000521283 PSD2Q9BQI7 771 aa9.07□□□□□ -0.96
TRIM35-204ENST00000521283 SF3B5Q9BWJ5 86 aaKnown RBP9.07□□□□□ -0.96
TRIM35-204ENST00000521283 SRXN1Q9BYN0 137 aa9.07□□□□□ -0.96
TRIM35-204ENST00000521283 KLHL4Q9C0H6 718 aa9.07□□□□□ -0.96
TRIM35-204ENST00000521283 QRSL1Q9H0R6 528 aaKnown RBP9.07□□□□□ -0.96
TRIM35-204ENST00000521283 NPHS2Q9NP85 383 aa9.07□□□□□ -0.96
TRIM35-204ENST00000521283 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.07□□□□□ -0.96
TRIM35-204ENST00000521283 DCTN4Q9UJW0 460 aa9.07□□□□□ -0.96
TRIM35-204ENST00000521283 OSGIN1Q9UJX0 560 aa9.07□□□□□ -0.96
TRIM35-204ENST00000521283 SLC13A4Q9UKG4 626 aa9.07□□□□□ -0.96
TRIM35-204ENST00000521283 ZNF443Q9Y2A4 671 aaPredicted RBP9.07□□□□□ -0.96
TRIM35-204ENST00000521283 TMED7Q9Y3B3 224 aa9.07□□□□□ -0.96
TRIM35-204ENST00000521283 OTOGQ6ZRI0 2925 aa9.06□□□□□ -0.96
TRIM35-204ENST00000521283 TRBV5-3A0A0A0MS03 114 aa9.06□□□□□ -0.96
TRIM35-204ENST00000521283 OR6C65A6NJZ3 312 aa9.06□□□□□ -0.96
TRIM35-204ENST00000521283 BBIP1A8MTZ0 92 aa9.06□□□□□ -0.96
TRIM35-204ENST00000521283 SMAD9O15198 467 aaKnown RBP9.06□□□□□ -0.96
TRIM35-204ENST00000521283 OR2T1O43869 369 aa9.06□□□□□ -0.96
TRIM35-204ENST00000521283 FESP07332 822 aa9.06□□□□□ -0.96
TRIM35-204ENST00000521283 C8BP07358 591 aa9.06□□□□□ -0.96
TRIM35-204ENST00000521283 PNMTP11086 282 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms