RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 AGAP4Q96P64 663 aa23.52■■□□□ 1.36
COL13A1-213ENST00000520267 SLC19A3Q9BZV2 496 aa23.52■■□□□ 1.36
COL13A1-213ENST00000520267 ST6GALNAC2Q9UJ37 374 aa23.52■■□□□ 1.36
COL13A1-213ENST00000520267 NOX1Q9Y5S8 564 aa23.52■■□□□ 1.36
COL13A1-213ENST00000520267 NUP210LQ5VU65 1888 aa23.52■■□□□ 1.36
COL13A1-213ENST00000520267 MST1P26927 711 aa23.52■■□□□ 1.36
COL13A1-213ENST00000520267 CSF2RBP32927 897 aa23.52■■□□□ 1.36
COL13A1-213ENST00000520267 GGTLC2Q14390 218 aa23.52■■□□□ 1.36
COL13A1-213ENST00000520267 VWA2Q5GFL6 755 aa23.52■■□□□ 1.36
COL13A1-213ENST00000520267 SLITRK4Q8IW52 837 aa23.52■■□□□ 1.36
COL13A1-213ENST00000520267 SLC35F3Q8IY50 421 aa23.52■■□□□ 1.36
COL13A1-213ENST00000520267 UBQLNLQ8IYU4 475 aa23.52■■□□□ 1.36
COL13A1-213ENST00000520267 SIX5Q8N196 739 aa23.52■■□□□ 1.36
COL13A1-213ENST00000520267 MVB12AQ96EY5 273 aa23.52■■□□□ 1.36
COL13A1-213ENST00000520267 GAL3ST4Q96RP7 486 aa23.52■■□□□ 1.36
COL13A1-213ENST00000520267 ADOQ96SZ5 270 aa23.52■■□□□ 1.36
COL13A1-213ENST00000520267 CNN2Q99439 309 aaKnown RBP23.52■■□□□ 1.36
COL13A1-213ENST00000520267 NUDT9Q9BW91 350 aa23.52■■□□□ 1.36
COL13A1-213ENST00000520267 CCDC86Q9H6F5 360 aaKnown RBP23.52■■□□□ 1.36
COL13A1-213ENST00000520267 UNC13CQ8NB66 2214 aa23.51■■□□□ 1.35
COL13A1-213ENST00000520267 SEC16AO15027 2179 aa23.51■■□□□ 1.35
COL13A1-213ENST00000520267 OR6C68A6NDL8 312 aa23.51■■□□□ 1.35
COL13A1-213ENST00000520267 FRG2CA6NGY1 282 aa23.51■■□□□ 1.35
COL13A1-213ENST00000520267 ARPC3O15145 178 aa23.51■■□□□ 1.35
COL13A1-213ENST00000520267 PLA2G10O15496 165 aa23.51■■□□□ 1.35
COL13A1-213ENST00000520267 ZNF264O43296 627 aa23.51■■□□□ 1.35
COL13A1-213ENST00000520267 DYRK3O43781 588 aa23.51■■□□□ 1.35
COL13A1-213ENST00000520267 NUDT21O43809 227 aaKnown RBP23.51■■□□□ 1.35
COL13A1-213ENST00000520267 TRAM1Q15629 374 aa23.51■■□□□ 1.35
COL13A1-213ENST00000520267 SLC25A45Q8N413 288 aa23.51■■□□□ 1.35
COL13A1-213ENST00000520267 RTN4RQ9BZR6 473 aa23.51■■□□□ 1.35
COL13A1-213ENST00000520267 NRSN2Q9GZP1 204 aa23.51■■□□□ 1.35
COL13A1-213ENST00000520267 OR2T7P0C7T2 308 aa23.5■■□□□ 1.35
COL13A1-213ENST00000520267 PNMTP11086 282 aa23.5■■□□□ 1.35
COL13A1-213ENST00000520267 IL18Q14116 193 aa23.5■■□□□ 1.35
COL13A1-213ENST00000520267 METAP1DQ6UB28 335 aaPredicted RBP23.5■■□□□ 1.35
COL13A1-213ENST00000520267 ZNF517Q6ZMY9 492 aaPredicted RBP23.5■■□□□ 1.35
COL13A1-213ENST00000520267 PLXDC1Q8IUK5 500 aa23.5■■□□□ 1.35
COL13A1-213ENST00000520267 SLC35F2Q8IXU6 374 aa23.5■■□□□ 1.35
COL13A1-213ENST00000520267 POMGNT2Q8NAT1 580 aa23.5■■□□□ 1.35
COL13A1-213ENST00000520267 OR13C5Q8NGS8 318 aa23.5■■□□□ 1.35
COL13A1-213ENST00000520267 OR2T27Q8NH04 317 aa23.5■■□□□ 1.35
COL13A1-213ENST00000520267 SLC22A4Q9H015 551 aa23.5■■□□□ 1.35
COL13A1-213ENST00000520267 MMP28Q9H239 520 aa23.5■■□□□ 1.35
COL13A1-213ENST00000520267 EXOSC3Q9NQT5 275 aaKnown RBP23.5■■□□□ 1.35
COL13A1-213ENST00000520267 SDK1Q7Z5N4 2213 aa23.5■■□□□ 1.35
COL13A1-213ENST00000520267 SC5DO75845 299 aa23.5■■□□□ 1.35
COL13A1-213ENST00000520267 TMED10P49755 219 aaKnown RBP23.5■■□□□ 1.35
COL13A1-213ENST00000520267 ZP2Q05996 745 aa23.5■■□□□ 1.35
COL13A1-213ENST00000520267 PON3Q15166 354 aa23.5■■□□□ 1.35
COL13A1-213ENST00000520267 PRSS58Q8IYP2 241 aa23.5■■□□□ 1.35
COL13A1-213ENST00000520267 D2HGDHQ8N465 521 aa23.5■■□□□ 1.35
COL13A1-213ENST00000520267 SPEM1Q8N4L4 309 aa23.5■■□□□ 1.35
COL13A1-213ENST00000520267 GHSRQ92847 366 aa23.5■■□□□ 1.35
COL13A1-213ENST00000520267 TP53INP1Q96A56 240 aa23.5■■□□□ 1.35
COL13A1-213ENST00000520267 RNF31Q96EP0 1072 aa23.5■■□□□ 1.35
COL13A1-213ENST00000520267 MOGAT1Q96PD6 335 aa23.5■■□□□ 1.35
COL13A1-213ENST00000520267 ENAMQ9NRM1 1142 aa23.5■■□□□ 1.35
COL13A1-213ENST00000520267 CDC14CA4D256 554 aa23.49■■□□□ 1.35
COL13A1-213ENST00000520267 C4orf47A7E2U8 309 aa23.49■■□□□ 1.35
COL13A1-213ENST00000520267 BLOC1S5-TXNDC5H3BN57 136 aa23.49■■□□□ 1.35
COL13A1-213ENST00000520267 DUX1O43812 170 aa23.49■■□□□ 1.35
COL13A1-213ENST00000520267 SPI1P17947 270 aa23.49■■□□□ 1.35
COL13A1-213ENST00000520267 AQP2P41181 271 aa23.49■■□□□ 1.35
COL13A1-213ENST00000520267 GRK6P43250 576 aa23.49■■□□□ 1.35
COL13A1-213ENST00000520267 DIO1P49895 249 aa23.49■■□□□ 1.35
COL13A1-213ENST00000520267 NRG3P56975 720 aa23.49■■□□□ 1.35
COL13A1-213ENST00000520267 OR10A3P58181 314 aa23.49■■□□□ 1.35
COL13A1-213ENST00000520267 ZNF74Q16587 644 aa23.49■■□□□ 1.35
COL13A1-213ENST00000520267 LCN1P1Q5VSP4 162 aa23.49■■□□□ 1.35
COL13A1-213ENST00000520267 C1orf189Q5VU69 101 aa23.49■■□□□ 1.35
COL13A1-213ENST00000520267 HBMQ6B0K9 141 aa23.49■■□□□ 1.35
COL13A1-213ENST00000520267 PXKQ7Z7A4 578 aa23.49■■□□□ 1.35
COL13A1-213ENST00000520267 RAB43Q86YS6 212 aa23.49■■□□□ 1.35
COL13A1-213ENST00000520267 Q8N402 240 aa23.49■■□□□ 1.35
COL13A1-213ENST00000520267 C10orf53Q8N6V4 93 aa23.49■■□□□ 1.35
COL13A1-213ENST00000520267 CCNL2Q96S94 520 aaPredicted RBP23.49■■□□□ 1.35
COL13A1-213ENST00000520267 NMNAT2Q9BZQ4 307 aa23.49■■□□□ 1.35
COL13A1-213ENST00000520267 ZNF304Q9HCX3 659 aa23.49■■□□□ 1.35
COL13A1-213ENST00000520267 B3GAT2Q9NPZ5 323 aa23.49■■□□□ 1.35
COL13A1-213ENST00000520267 COL5A1P20908 1838 aaPredicted RBP23.49■■□□□ 1.35
COL13A1-213ENST00000520267 TCRBV16S1A1N1A0A5B0 115 aa23.49■■□□□ 1.35
COL13A1-213ENST00000520267 ICOSLGO75144 302 aa23.49■■□□□ 1.35
COL13A1-213ENST00000520267 SLC2A2P11168 524 aaPredicted RBP23.49■■□□□ 1.35
COL13A1-213ENST00000520267 FBLP22087 321 aaKnown RBP23.49■■□□□ 1.35
COL13A1-213ENST00000520267 HTR3AP46098 478 aa23.49■■□□□ 1.35
COL13A1-213ENST00000520267 PRPS1P60891 318 aa23.49■■□□□ 1.35
COL13A1-213ENST00000520267 ELAVL1Q15717 326 aaKnown RBP23.49■■□□□ 1.35
COL13A1-213ENST00000520267 ACSM3Q53FZ2 586 aa23.49■■□□□ 1.35
COL13A1-213ENST00000520267 UBE2J2Q8N2K1 259 aa23.49■■□□□ 1.35
COL13A1-213ENST00000520267 OR14A16Q8NHC5 309 aa23.49■■□□□ 1.35
COL13A1-213ENST00000520267 ACOT12Q8WYK0 555 aa23.49■■□□□ 1.35
COL13A1-213ENST00000520267 DNASE2BQ8WZ79 361 aa23.49■■□□□ 1.35
COL13A1-213ENST00000520267 PELI1Q96FA3 418 aa23.49■■□□□ 1.35
COL13A1-213ENST00000520267 GPX7Q96SL4 187 aaPredicted RBP23.49■■□□□ 1.35
COL13A1-213ENST00000520267 TMEM43Q9BTV4 400 aa23.49■■□□□ 1.35
COL13A1-213ENST00000520267 COPS3Q9UNS2 423 aa23.49■■□□□ 1.35
COL13A1-213ENST00000520267 A0A1W2PRG6 482 aa23.48■■□□□ 1.35
COL13A1-213ENST00000520267 BCAT2O15382 392 aaPredicted RBP23.48■■□□□ 1.35
COL13A1-213ENST00000520267 SELENOFO60613 162 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms