RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 FASTKQ14296 549 aaKnown RBP2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 MXD4Q14582 209 aaPredicted RBP2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 ZNF846Q147U1 533 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 EMC2Q15006 297 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 MAPRE2Q15555 327 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 PSMD5Q16401 504 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 KYAT1Q16773 422 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 CYBRD1Q53TN4 286 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 TFDP3Q5H9I0 405 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 UBE2UQ5VVX9 321 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 KCTD11Q693B1 232 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 LAIR2Q6ISS4 152 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 ZNF773Q6PK81 442 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 TMEM270Q6UE05 265 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 MFSD7Q6UXD7 560 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 ISLR2Q6UXK2 745 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 ZNF841Q6ZN19 808 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 TMUB2Q71RG4 321 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 PRSS48Q7RTY5 328 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 ASPGQ86U10 573 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 C17orf64Q86WR6 236 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 CACUL1Q86Y37 369 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 LAX1Q8IWV1 398 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 ELMOD2Q8IZ81 293 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 DEFB107AQ8IZN7 70 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 THEM5Q8N1Q8 247 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 C10orf53Q8N6V4 93 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 TTLQ8NG68 377 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 OR4M2Q8NGB6 313 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 OR4M1Q8NGD0 313 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 OR2T3Q8NH03 318 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 RHOXF1Q8NHV9 184 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 SPATA18Q8TC71 538 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 PNPT1Q8TCS8 783 aaKnown RBP2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 DYNC2LI1Q8TCX1 351 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 ZFP90Q8TF47 636 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 PHF10Q8WUB8 498 aaKnown RBP2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 RAB2BQ8WUD1 216 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 LIPHQ8WWY8 451 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 DCPSQ96C86 337 aaKnown RBP2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 LRRC39Q96DD0 335 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 CFAP36Q96G28 342 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 PDXPQ96GD0 296 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 HSFY1Q96LI6 401 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 FAM111AQ96PZ2 611 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 KCNK16Q96T55 309 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 SOSTQ9BQB4 213 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 DCUN1D5Q9BTE7 237 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 RBM24Q9BX46 236 aaKnown RBP2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 RAB11FIP5Q9BXF6 653 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 CACNG6Q9BXT2 260 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 NXF2Q9GZY0 626 aaKnown RBP2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 POLR3FQ9H1D9 316 aaPredicted RBP2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 NARFLQ9H6Q4 476 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 ZNF665Q9H7R5 613 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 AKIRIN1Q9H9L7 192 aaPredicted RBP2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 WDR41Q9HAD4 459 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 PLEKHA3Q9HB20 300 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 MYOZ2Q9NPC6 264 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 ZNF302Q9NR11 478 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 CISHQ9NSE2 258 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 DEPPQ9NTK1 212 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 SMOXQ9NWM0 555 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 PAK1IP1Q9NWT1 392 aaPredicted RBP2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 PLEK2Q9NYT0 353 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 TRPC4Q9UBN4 977 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 CD300AQ9UGN4 299 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 FBXO5Q9UKT4 447 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 NUP50Q9UKX7 468 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 DNPEPQ9ULA0 475 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 VANGL2Q9ULK5 521 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 KCNK6Q9Y257 313 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 AP3M1Q9Y2T2 418 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 TEX264Q9Y6I9 313 aa2.65□□□□□ -1.99
HMGB1P41-201ENST00000520234 ANKRD12Q6UB98 2062 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 SCN9AQ15858 1988 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 TRGV8A0A0C4DH27 118 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 IQANK1A0A1B0GTG1 560 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 TCRBV9S1A1TA0A576 114 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 TMEM150BA6NC51 233 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 LINC00862A6NCI5 91 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 ACOD1A6NK06 481 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 EVPLLA8MZ36 301 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 LEUTXA8MZ59 168 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 K7EQG2 157 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 APOC4-APOC2K7ER74 178 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 DDX39AO00148 427 aaKnown RBP2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 CACNB4O00305 520 aaPredicted RBP2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 TXNDC9O14530 226 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 CYB561D2O14569 222 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 XPO1O14980 1071 aaKnown RBP2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 CHADO15335 359 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 FMO6PO60774 539 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 UPK1BO75841 260 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 GABARAPO95166 117 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 PTTG1O95997 202 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 IGHG1P01857 330 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 APOC2P02655 101 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 PGK2P07205 417 aa2.64□□□□□ -1.99
HMGB1P41-201ENST00000520234 CD1DP15813 335 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms