RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 OR1Q1Q15612 314 aa12.03□□□□□ -0.48
SNF8-206ENST00000509989 NRF1Q16656 503 aa12.03□□□□□ -0.48
SNF8-206ENST00000509989 C8orf82Q6P1X6 216 aaPredicted RBP12.03□□□□□ -0.48
SNF8-206ENST00000509989 WDR88Q6ZMY6 472 aa12.03□□□□□ -0.48
SNF8-206ENST00000509989 TMEM200AQ86VY9 491 aa12.03□□□□□ -0.48
SNF8-206ENST00000509989 CXorf67Q86X51 503 aaPredicted RBP12.03□□□□□ -0.48
SNF8-206ENST00000509989 OR8J3Q8NGG0 315 aa12.03□□□□□ -0.48
SNF8-206ENST00000509989 OR52E4Q8NGH9 312 aa12.03□□□□□ -0.48
SNF8-206ENST00000509989 RP9Q8TA86 221 aaKnown RBP12.03□□□□□ -0.48
SNF8-206ENST00000509989 FAM222BQ8WU58 562 aa12.03□□□□□ -0.48
SNF8-206ENST00000509989 REXO5Q96IC2 774 aaKnown RBP12.03□□□□□ -0.48
SNF8-206ENST00000509989 TIGARQ9NQ88 270 aa12.03□□□□□ -0.48
SNF8-206ENST00000509989 FOXD3Q9UJU5 478 aaPredicted RBP12.03□□□□□ -0.48
SNF8-206ENST00000509989 HDGFL3Q9Y3E1 203 aa12.03□□□□□ -0.48
SNF8-206ENST00000509989 CCDC168Q8NDH2 2452 aa12.03□□□□□ -0.48
SNF8-206ENST00000509989 RAI1Q7Z5J4 1906 aaPredicted RBP12.03□□□□□ -0.48
SNF8-206ENST00000509989 OTOGQ6ZRI0 2925 aa12.02□□□□□ -0.48
SNF8-206ENST00000509989 FTCDNL1E5RQL4 147 aa12.02□□□□□ -0.49
SNF8-206ENST00000509989 LOXP28300 417 aaPredicted RBP12.02□□□□□ -0.49
SNF8-206ENST00000509989 IDUAP35475 653 aa12.02□□□□□ -0.49
SNF8-206ENST00000509989 RPS5P46782 204 aaKnown RBP12.02□□□□□ -0.49
SNF8-206ENST00000509989 COPZ1P61923 177 aa12.02□□□□□ -0.49
SNF8-206ENST00000509989 LGALS3BPQ08380 585 aa12.02□□□□□ -0.49
SNF8-206ENST00000509989 DAZAP2Q15038 168 aaPredicted RBP12.02□□□□□ -0.49
SNF8-206ENST00000509989 RNPS1Q15287 305 aaKnown RBP12.02□□□□□ -0.49
SNF8-206ENST00000509989 MAPRE2Q15555 327 aa12.02□□□□□ -0.49
SNF8-206ENST00000509989 TMEM201Q5SNT2 666 aa12.02□□□□□ -0.49
SNF8-206ENST00000509989 C1orf140Q5VVS0 124 aa12.02□□□□□ -0.49
SNF8-206ENST00000509989 PIGWQ7Z7B1 504 aa12.02□□□□□ -0.49
SNF8-206ENST00000509989 KRT73Q86Y46 540 aa12.02□□□□□ -0.49
SNF8-206ENST00000509989 KIF18BQ86Y91 864 aa12.02□□□□□ -0.49
SNF8-206ENST00000509989 WDFY1Q8IWB7 410 aa12.02□□□□□ -0.49
SNF8-206ENST00000509989 GABRG1Q8N1C3 465 aa12.02□□□□□ -0.49
SNF8-206ENST00000509989 KDM8Q8N371 416 aa12.02□□□□□ -0.49
SNF8-206ENST00000509989 ZIC4Q8N9L1 334 aa12.02□□□□□ -0.49
SNF8-206ENST00000509989 TAAR8Q969N4 342 aa12.02□□□□□ -0.49
SNF8-206ENST00000509989 DDIT4LQ96D03 193 aa12.02□□□□□ -0.49
SNF8-206ENST00000509989 HS3ST6Q96QI5 342 aa12.02□□□□□ -0.49
SNF8-206ENST00000509989 ZNF607Q96SK3 696 aa12.02□□□□□ -0.49
SNF8-206ENST00000509989 ECSITQ9BQ95 431 aa12.02□□□□□ -0.49
SNF8-206ENST00000509989 GLRX2Q9NS18 164 aa12.02□□□□□ -0.49
SNF8-206ENST00000509989 RASSF1Q9NS23 344 aa12.02□□□□□ -0.49
SNF8-206ENST00000509989 ADPRHL2Q9NX46 363 aa12.02□□□□□ -0.49
SNF8-206ENST00000509989 FAM53CQ9NYF3 392 aa12.02□□□□□ -0.49
SNF8-206ENST00000509989 SPIN1Q9Y657 262 aaPredicted RBP12.02□□□□□ -0.49
SNF8-206ENST00000509989 CADP27708 2225 aa12.02□□□□□ -0.49
SNF8-206ENST00000509989 IGKV3D-15A0A087WSY6 115 aa12.01□□□□□ -0.49
SNF8-206ENST00000509989 A0A0B4J2E0 115 aa12.01□□□□□ -0.49
SNF8-206ENST00000509989 A0A1B0GX12 115 aa12.01□□□□□ -0.49
SNF8-206ENST00000509989 CPSF4LA6NMK7 179 aaKnown RBP12.01□□□□□ -0.49
SNF8-206ENST00000509989 A8MVM7 634 aa12.01□□□□□ -0.49
SNF8-206ENST00000509989 DEFB108AA8MXU0 73 aa12.01□□□□□ -0.49
SNF8-206ENST00000509989 SLC22A2O15244 555 aa12.01□□□□□ -0.49
SNF8-206ENST00000509989 CCDC22O60826 627 aa12.01□□□□□ -0.49
SNF8-206ENST00000509989 ADAP00813 363 aa12.01□□□□□ -0.49
SNF8-206ENST00000509989 UQCRBP14927 111 aa12.01□□□□□ -0.49
SNF8-206ENST00000509989 OR3A2P47893 321 aa12.01□□□□□ -0.49
SNF8-206ENST00000509989 CLK1P49759 484 aaKnown RBP12.01□□□□□ -0.49
SNF8-206ENST00000509989 CDH12P55289 794 aa12.01□□□□□ -0.49
SNF8-206ENST00000509989 CSNK2A1P68400 391 aaPredicted RBP12.01□□□□□ -0.49
SNF8-206ENST00000509989 OTUD3Q5T2D3 398 aaPredicted RBP12.01□□□□□ -0.49
SNF8-206ENST00000509989 EEF1A1P5Q5VTE0 462 aa12.01□□□□□ -0.49
SNF8-206ENST00000509989 C6orf89Q6UWU4 347 aa12.01□□□□□ -0.49
SNF8-206ENST00000509989 CCDC80Q76M96 950 aa12.01□□□□□ -0.49
SNF8-206ENST00000509989 CPLX4Q7Z7G2 160 aa12.01□□□□□ -0.49
SNF8-206ENST00000509989 CDC20BQ86Y33 519 aa12.01□□□□□ -0.49
SNF8-206ENST00000509989 SLC43A2Q8N370 569 aa12.01□□□□□ -0.49
SNF8-206ENST00000509989 LSMEM1Q8N8F7 131 aa12.01□□□□□ -0.49
SNF8-206ENST00000509989 SLC25A36Q96CQ1 311 aa12.01□□□□□ -0.49
SNF8-206ENST00000509989 ZNF385AQ96PM9 386 aaKnown RBP12.01□□□□□ -0.49
SNF8-206ENST00000509989 MCHR1Q99705 422 aa12.01□□□□□ -0.49
SNF8-206ENST00000509989 SPATA5L1Q9BVQ7 753 aa12.01□□□□□ -0.49
SNF8-206ENST00000509989 POLDIP3Q9BY77 421 aaKnown RBP12.01□□□□□ -0.49
SNF8-206ENST00000509989 POTEKPQ9BYX7 375 aa12.01□□□□□ -0.49
SNF8-206ENST00000509989 ARL8BQ9NVJ2 186 aa12.01□□□□□ -0.49
SNF8-206ENST00000509989 ELOVL5Q9NYP7 299 aa12.01□□□□□ -0.49
SNF8-206ENST00000509989 KLHL9Q9P2J3 617 aa12.01□□□□□ -0.49
SNF8-206ENST00000509989 TRAPPC4Q9Y296 219 aa12.01□□□□□ -0.49
SNF8-206ENST00000509989 ELOA3DA6NLF2 546 aaPredicted RBP12□□□□□ -0.49
SNF8-206ENST00000509989 ZNF724A8MTY0 619 aa12□□□□□ -0.49
SNF8-206ENST00000509989 FAM220BPB1ANY3 271 aa12□□□□□ -0.49
SNF8-206ENST00000509989 C16orf97H3BN30 126 aa12□□□□□ -0.49
SNF8-206ENST00000509989 SERPINB7O75635 380 aa12□□□□□ -0.49
SNF8-206ENST00000509989 HRGP04196 525 aa12□□□□□ -0.49
SNF8-206ENST00000509989 IGHV1-2P23083 117 aa12□□□□□ -0.49
SNF8-206ENST00000509989 OR1E2P47887 323 aa12□□□□□ -0.49
SNF8-206ENST00000509989 NUDT2P50583 147 aa12□□□□□ -0.49
SNF8-206ENST00000509989 SLC7A2P52569 658 aa12□□□□□ -0.49
SNF8-206ENST00000509989 SLC35A1P78382 337 aa12□□□□□ -0.49
SNF8-206ENST00000509989 LIPEQ05469 1076 aa12□□□□□ -0.49
SNF8-206ENST00000509989 FOXD4Q12950 439 aaPredicted RBP12□□□□□ -0.49
SNF8-206ENST00000509989 SLC17A1Q14916 467 aa12□□□□□ -0.49
SNF8-206ENST00000509989 ZSWIM7Q19AV6 140 aa12□□□□□ -0.49
SNF8-206ENST00000509989 ELOA3BQ3SY89 546 aa12□□□□□ -0.49
SNF8-206ENST00000509989 ALG10BQ5I7T1 473 aa12□□□□□ -0.49
SNF8-206ENST00000509989 ENTPD8Q5MY95 495 aa12□□□□□ -0.49
SNF8-206ENST00000509989 GTF2IRD2BQ6EKJ0 949 aa12□□□□□ -0.49
SNF8-206ENST00000509989 GTF2IRD2Q86UP8 949 aa12□□□□□ -0.49
SNF8-206ENST00000509989 MICU2Q8IYU8 434 aa12□□□□□ -0.49
SNF8-206ENST00000509989 PCYOX1LQ8NBM8 494 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms