RNA–Protein interactions for RNA: ENST00000492464.1

MMP11-212, Transcript of matrix metallopeptidase 11, humanhuman

TSL 2

Gene MMP11, Length 703 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11-212ENST00000492464 RTL6Q6ICC9 239 aa12.67□□□□□ -0.38
MMP11-212ENST00000492464 WNT2BQ93097 391 aa12.67□□□□□ -0.38
MMP11-212ENST00000492464 DNAJA3Q96EY1 480 aa12.67□□□□□ -0.38
MMP11-212ENST00000492464 UCN2Q96RP3 112 aa12.67□□□□□ -0.38
MMP11-212ENST00000492464 TM9SF2Q99805 663 aa12.67□□□□□ -0.38
MMP11-212ENST00000492464 TAPBPLQ9BX59 468 aa12.67□□□□□ -0.38
MMP11-212ENST00000492464 SRXN1Q9BYN0 137 aa12.67□□□□□ -0.38
MMP11-212ENST00000492464 CLCF1Q9UBD9 225 aa12.67□□□□□ -0.38
MMP11-212ENST00000492464 AURKCQ9UQB9 309 aa12.67□□□□□ -0.38
MMP11-212ENST00000492464 SLC5A6Q9Y289 635 aa12.67□□□□□ -0.38
MMP11-212ENST00000492464 TRAPPC4Q9Y296 219 aa12.67□□□□□ -0.38
MMP11-212ENST00000492464 IGKV1D-42A0A075B6H8 117 aa12.66□□□□□ -0.38
MMP11-212ENST00000492464 TRAV36DV7A0A075B6V5 113 aa12.66□□□□□ -0.38
MMP11-212ENST00000492464 TCRBV3S1A0A5B6 114 aa12.66□□□□□ -0.38
MMP11-212ENST00000492464 FFAR1O14842 300 aa12.66□□□□□ -0.38
MMP11-212ENST00000492464 DNPH1O43598 174 aa12.66□□□□□ -0.38
MMP11-212ENST00000492464 DIRAS1O95057 198 aa12.66□□□□□ -0.38
MMP11-212ENST00000492464 LYPD3O95274 346 aa12.66□□□□□ -0.38
MMP11-212ENST00000492464 THY1P04216 161 aa12.66□□□□□ -0.38
MMP11-212ENST00000492464 H1F0P07305 194 aaKnown RBP12.66□□□□□ -0.38
MMP11-212ENST00000492464 GLI4P10075 376 aa12.66□□□□□ -0.38
MMP11-212ENST00000492464 RAP2AP10114 183 aa12.66□□□□□ -0.38
MMP11-212ENST00000492464 PTNP21246 168 aa12.66□□□□□ -0.38
MMP11-212ENST00000492464 GTF2E2P29084 291 aaKnown RBP12.66□□□□□ -0.38
MMP11-212ENST00000492464 RBM34P42696 430 aaKnown RBP12.66□□□□□ -0.38
MMP11-212ENST00000492464 SMIM11AP58511 58 aa12.66□□□□□ -0.38
MMP11-212ENST00000492464 SPIBQ01892 262 aa12.66□□□□□ -0.38
MMP11-212ENST00000492464 EGR4Q05215 589 aa12.66□□□□□ -0.38
MMP11-212ENST00000492464 PMPCAQ10713 525 aa12.66□□□□□ -0.38
MMP11-212ENST00000492464 OR7A5Q15622 319 aa12.66□□□□□ -0.38
MMP11-212ENST00000492464 ZNF239Q16600 458 aaKnown RBP12.66□□□□□ -0.38
MMP11-212ENST00000492464 LINC00114Q6XXX2 140 aa12.66□□□□□ -0.38
MMP11-212ENST00000492464 WDR88Q6ZMY6 472 aa12.66□□□□□ -0.38
MMP11-212ENST00000492464 PIWIL3Q7Z3Z3 882 aaKnown RBP12.66□□□□□ -0.38
MMP11-212ENST00000492464 ADGRE4PQ86SQ3 457 aa12.66□□□□□ -0.38
MMP11-212ENST00000492464 P3H2Q8IVL5 708 aa12.66□□□□□ -0.38
MMP11-212ENST00000492464 ADGRG5Q8IZF4 528 aa12.66□□□□□ -0.38
MMP11-212ENST00000492464 FNDC9Q8TBE3 224 aa12.66□□□□□ -0.38
MMP11-212ENST00000492464 HS6ST2Q96MM7 605 aa12.66□□□□□ -0.38
MMP11-212ENST00000492464 DMRTA2Q96SC8 542 aa12.66□□□□□ -0.38
MMP11-212ENST00000492464 ZNF347Q96SE7 839 aa12.66□□□□□ -0.38
MMP11-212ENST00000492464 TTYH2Q9BSA4 534 aa12.66□□□□□ -0.38
MMP11-212ENST00000492464 SLC19A3Q9BZV2 496 aa12.66□□□□□ -0.38
MMP11-212ENST00000492464 YY1AP1Q9H869 796 aa12.66□□□□□ -0.38
MMP11-212ENST00000492464 NMNAT1Q9HAN9 279 aaPredicted RBP12.66□□□□□ -0.38
MMP11-212ENST00000492464 RHCGQ9UBD6 479 aa12.66□□□□□ -0.38
MMP11-212ENST00000492464 HCFC1P51610 2035 aa12.66□□□□□ -0.38
MMP11-212ENST00000492464 FASNP49327 2511 aaKnown RBP12.65□□□□□ -0.38
MMP11-212ENST00000492464 MBD3L4A6NDZ8 208 aaPredicted RBP12.65□□□□□ -0.38
MMP11-212ENST00000492464 MBD3L3A6NE82 208 aaPredicted RBP12.65□□□□□ -0.38
MMP11-212ENST00000492464 MBD3L5A6NJ08 208 aaPredicted RBP12.65□□□□□ -0.38
MMP11-212ENST00000492464 LIPT2A6NK58 231 aa12.65□□□□□ -0.38
MMP11-212ENST00000492464 KDM4EB2RXH2 506 aaPredicted RBP12.65□□□□□ -0.38
MMP11-212ENST00000492464 KPNA4O00629 521 aaPredicted RBP12.65□□□□□ -0.38
MMP11-212ENST00000492464 OR2T1O43869 369 aa12.65□□□□□ -0.38
MMP11-212ENST00000492464 NPIPB7O75200 414 aa12.65□□□□□ -0.38
MMP11-212ENST00000492464 PRSS23O95084 383 aa12.65□□□□□ -0.38
MMP11-212ENST00000492464 IL2RAP01589 272 aa12.65□□□□□ -0.38
MMP11-212ENST00000492464 MT-ND1P03886 318 aa12.65□□□□□ -0.38
MMP11-212ENST00000492464 IMPDH2P12268 514 aa12.65□□□□□ -0.38
MMP11-212ENST00000492464 ENPP1P22413 925 aa12.65□□□□□ -0.38
MMP11-212ENST00000492464 TIMP3P35625 211 aa12.65□□□□□ -0.38
MMP11-212ENST00000492464 MAGEA2P43356 314 aa12.65□□□□□ -0.38
MMP11-212ENST00000492464 RPS5P46782 204 aaKnown RBP12.65□□□□□ -0.38
MMP11-212ENST00000492464 ERFP50548 548 aa12.65□□□□□ -0.38
MMP11-212ENST00000492464 NUP107P57740 925 aa12.65□□□□□ -0.38
MMP11-212ENST00000492464 ELF3P78545 371 aaPredicted RBP12.65□□□□□ -0.38
MMP11-212ENST00000492464 FGD3Q5JSP0 725 aa12.65□□□□□ -0.38
MMP11-212ENST00000492464 FAM69AQ5T7M9 428 aa12.65□□□□□ -0.38
MMP11-212ENST00000492464 OR2A2Q6IF42 318 aa12.65□□□□□ -0.38
MMP11-212ENST00000492464 PLXDC2Q6UX71 529 aa12.65□□□□□ -0.38
MMP11-212ENST00000492464 TSEN54Q7Z6J9 526 aaKnown RBP12.65□□□□□ -0.38
MMP11-212ENST00000492464 LSRQ86X29 649 aaPredicted RBP12.65□□□□□ -0.38
MMP11-212ENST00000492464 NKAIN4Q8IVV8 208 aa12.65□□□□□ -0.38
MMP11-212ENST00000492464 RPRMLQ8N4K4 120 aa12.65□□□□□ -0.38
MMP11-212ENST00000492464 C10orf53Q8N6V4 93 aa12.65□□□□□ -0.38
MMP11-212ENST00000492464 PIK3C3Q8NEB9 887 aa12.65□□□□□ -0.38
MMP11-212ENST00000492464 MFSD8Q8NHS3 518 aa12.65□□□□□ -0.38
MMP11-212ENST00000492464 MBD3L2Q8NHZ7 208 aaPredicted RBP12.65□□□□□ -0.38
MMP11-212ENST00000492464 TMEM255BQ8WV15 326 aa12.65□□□□□ -0.38
MMP11-212ENST00000492464 CANT1Q8WVQ1 401 aa12.65□□□□□ -0.38
MMP11-212ENST00000492464 TMEM239Q8WW34 195 aa12.65□□□□□ -0.38
MMP11-212ENST00000492464 RND1Q92730 232 aa12.65□□□□□ -0.38
MMP11-212ENST00000492464 SLC25A36Q96CQ1 311 aa12.65□□□□□ -0.38
MMP11-212ENST00000492464 KTI12Q96EK9 354 aaPredicted RBP12.65□□□□□ -0.38
MMP11-212ENST00000492464 PRSS27Q9BQR3 290 aa12.65□□□□□ -0.38
MMP11-212ENST00000492464 NAA11Q9BSU3 229 aaPredicted RBP12.65□□□□□ -0.38
MMP11-212ENST00000492464 ZNF426Q9BUY5 554 aa12.65□□□□□ -0.38
MMP11-212ENST00000492464 KLHL4Q9C0H6 718 aa12.65□□□□□ -0.38
MMP11-212ENST00000492464 ANKRD19PQ9H560 264 aa12.65□□□□□ -0.38
MMP11-212ENST00000492464 C6orf203Q9P0P8 240 aaPredicted RBP12.65□□□□□ -0.38
MMP11-212ENST00000492464 MED31Q9Y3C7 131 aa12.65□□□□□ -0.38
MMP11-212ENST00000492464 TESMINQ9Y4I5 508 aa12.65□□□□□ -0.38
MMP11-212ENST00000492464 GCN1Q92616 2671 aaKnown RBP12.65□□□□□ -0.39
MMP11-212ENST00000492464 USP9XQ93008 2570 aaPredicted RBP12.64□□□□□ -0.39
MMP11-212ENST00000492464 IGHV3-15A0A0B4J1V0 119 aa12.64□□□□□ -0.39
MMP11-212ENST00000492464 A0A1W2PRQ8 180 aa12.64□□□□□ -0.39
MMP11-212ENST00000492464 H0YHG0 523 aa12.64□□□□□ -0.39
MMP11-212ENST00000492464 EIF1BO60739 113 aaKnown RBP12.64□□□□□ -0.39
MMP11-212ENST00000492464 GADD45GO95257 159 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms